RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 CELF2-AS1Q8N7Q2 184 aa13.03□□□□□ -0.32
PRPF40B-211ENST00000551063 LINC01356Q8N9X3 169 aa13.03□□□□□ -0.32
PRPF40B-211ENST00000551063 OR56B2PQ8NGI1 322 aa13.03□□□□□ -0.32
PRPF40B-211ENST00000551063 FAM81AQ8TBF8 368 aa13.03□□□□□ -0.32
PRPF40B-211ENST00000551063 REEP6Q96HR9 211 aa13.03□□□□□ -0.32
PRPF40B-211ENST00000551063 PGAM5Q96HS1 289 aa13.03□□□□□ -0.32
PRPF40B-211ENST00000551063 HRASLS5Q96KN8 279 aa13.03□□□□□ -0.32
PRPF40B-211ENST00000551063 OR8B4Q96RC9 309 aa13.03□□□□□ -0.32
PRPF40B-211ENST00000551063 MROQ9BYG7 248 aa13.03□□□□□ -0.32
PRPF40B-211ENST00000551063 PPP1R3CQ9UQK1 317 aa13.03□□□□□ -0.32
PRPF40B-211ENST00000551063 LRP12Q9Y561 859 aa13.03□□□□□ -0.32
PRPF40B-211ENST00000551063 N6AMT1Q9Y5N5 214 aa13.03□□□□□ -0.32
PRPF40B-211ENST00000551063 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.03□□□□□ -0.32
PRPF40B-211ENST00000551063 hCG_38984A0A1B0GV85 526 aa13.02□□□□□ -0.33
PRPF40B-211ENST00000551063 ACOD1A6NK06 481 aa13.02□□□□□ -0.33
PRPF40B-211ENST00000551063 F5H5P2 479 aa13.02□□□□□ -0.33
PRPF40B-211ENST00000551063 WNT9BO14905 357 aa13.02□□□□□ -0.33
PRPF40B-211ENST00000551063 LMX1BO60663 402 aa13.02□□□□□ -0.33
PRPF40B-211ENST00000551063 ZNF254O75437 659 aa13.02□□□□□ -0.33
PRPF40B-211ENST00000551063 SBK2P0C263 348 aa13.02□□□□□ -0.33
PRPF40B-211ENST00000551063 CD200P41217 278 aa13.02□□□□□ -0.33
PRPF40B-211ENST00000551063 ZNF181Q2M3W8 571 aa13.02□□□□□ -0.33
PRPF40B-211ENST00000551063 KLBQ86Z14 1044 aa13.02□□□□□ -0.33
PRPF40B-211ENST00000551063 SLC35F2Q8IXU6 374 aa13.02□□□□□ -0.33
PRPF40B-211ENST00000551063 ZNF679Q8IYX0 411 aa13.02□□□□□ -0.33
PRPF40B-211ENST00000551063 RFKQ969G6 155 aa13.02□□□□□ -0.33
PRPF40B-211ENST00000551063 ERGIC1Q969X5 290 aa13.02□□□□□ -0.33
PRPF40B-211ENST00000551063 SGK3Q96BR1 496 aa13.02□□□□□ -0.33
PRPF40B-211ENST00000551063 RAB39BQ96DA2 213 aa13.02□□□□□ -0.33
PRPF40B-211ENST00000551063 SOX7Q9BT81 388 aa13.02□□□□□ -0.33
PRPF40B-211ENST00000551063 ADAT1Q9BUB4 502 aaKnown RBP13.02□□□□□ -0.33
PRPF40B-211ENST00000551063 NARFLQ9H6Q4 476 aa13.02□□□□□ -0.33
PRPF40B-211ENST00000551063 GCM1Q9NP62 436 aa13.02□□□□□ -0.33
PRPF40B-211ENST00000551063 CLN6Q9NWW5 311 aa13.02□□□□□ -0.33
PRPF40B-211ENST00000551063 IMPAD1Q9NX62 359 aa13.02□□□□□ -0.33
PRPF40B-211ENST00000551063 ZNF391Q9UJN7 358 aa13.02□□□□□ -0.33
PRPF40B-211ENST00000551063 COPS3Q9UNS2 423 aa13.02□□□□□ -0.33
PRPF40B-211ENST00000551063 NPTNQ9Y639 398 aa13.02□□□□□ -0.33
PRPF40B-211ENST00000551063 B4DSR2 109 aa13.01□□□□□ -0.33
PRPF40B-211ENST00000551063 ZNF670-ZNF695F2Z2N8 137 aa13.01□□□□□ -0.33
PRPF40B-211ENST00000551063 H0YL77 283 aa13.01□□□□□ -0.33
PRPF40B-211ENST00000551063 GMDSO60547 372 aa13.01□□□□□ -0.33
PRPF40B-211ENST00000551063 PTBP3O95758 552 aaKnown RBP13.01□□□□□ -0.33
PRPF40B-211ENST00000551063 TGFAP01135 160 aa13.01□□□□□ -0.33
PRPF40B-211ENST00000551063 HLA-DPB1P04440 258 aa13.01□□□□□ -0.33
PRPF40B-211ENST00000551063 HCCSP53701 268 aa13.01□□□□□ -0.33
PRPF40B-211ENST00000551063 LMO4P61968 165 aa13.01□□□□□ -0.33
PRPF40B-211ENST00000551063 FAM3AP98173 230 aa13.01□□□□□ -0.33
PRPF40B-211ENST00000551063 OR8G1Q15617 311 aa13.01□□□□□ -0.33
PRPF40B-211ENST00000551063 SNCBQ16143 134 aa13.01□□□□□ -0.33
PRPF40B-211ENST00000551063 ZNF829Q3KNS6 432 aaPredicted RBP13.01□□□□□ -0.33
PRPF40B-211ENST00000551063 ZNF322Q6U7Q0 402 aaPredicted RBP13.01□□□□□ -0.33
PRPF40B-211ENST00000551063 ZBTB49Q6ZSB9 765 aa13.01□□□□□ -0.33
PRPF40B-211ENST00000551063 SPERTQ8NA61 448 aa13.01□□□□□ -0.33
PRPF40B-211ENST00000551063 SPATA3Q8NHX4 192 aa13.01□□□□□ -0.33
PRPF40B-211ENST00000551063 ITFG2Q969R8 447 aa13.01□□□□□ -0.33
PRPF40B-211ENST00000551063 EME1Q96AY2 570 aa13.01□□□□□ -0.33
PRPF40B-211ENST00000551063 SIGLEC11Q96RL6 698 aa13.01□□□□□ -0.33
PRPF40B-211ENST00000551063 GAL3ST1Q99999 423 aa13.01□□□□□ -0.33
PRPF40B-211ENST00000551063 DCAF16Q9NXF7 216 aa13.01□□□□□ -0.33
PRPF40B-211ENST00000551063 TREM2Q9NZC2 230 aa13.01□□□□□ -0.33
PRPF40B-211ENST00000551063 LPAR3Q9UBY5 353 aa13.01□□□□□ -0.33
PRPF40B-211ENST00000551063 ANKRD30BLA7E2S9 258 aa13□□□□□ -0.33
PRPF40B-211ENST00000551063 PRR32B1ATL7 298 aa13□□□□□ -0.33
PRPF40B-211ENST00000551063 BAG2O95816 211 aa13□□□□□ -0.33
PRPF40B-211ENST00000551063 IFNA2P01563 188 aa13□□□□□ -0.33
PRPF40B-211ENST00000551063 IGHV2-70P01814 119 aa13□□□□□ -0.33
PRPF40B-211ENST00000551063 IGHV2-5P01817 119 aa13□□□□□ -0.33
PRPF40B-211ENST00000551063 PCMT1P22061 227 aa13□□□□□ -0.33
PRPF40B-211ENST00000551063 CA6P23280 308 aa13□□□□□ -0.33
PRPF40B-211ENST00000551063 RIDAP52758 137 aaKnown RBP13□□□□□ -0.33
PRPF40B-211ENST00000551063 DVL1P1P54792 670 aaPredicted RBP13□□□□□ -0.33
PRPF40B-211ENST00000551063 CXCR4P61073 352 aa13□□□□□ -0.33
PRPF40B-211ENST00000551063 SNRPGP62308 76 aaKnown RBP13□□□□□ -0.33
PRPF40B-211ENST00000551063 GABPB1Q06547 395 aaPredicted RBP13□□□□□ -0.33
PRPF40B-211ENST00000551063 EGR3Q06889 387 aa13□□□□□ -0.33
PRPF40B-211ENST00000551063 MZT1Q08AG7 82 aa13□□□□□ -0.33
PRPF40B-211ENST00000551063 MAB21L1Q13394 359 aa13□□□□□ -0.33
PRPF40B-211ENST00000551063 OR8B8Q15620 311 aa13□□□□□ -0.33
PRPF40B-211ENST00000551063 ZIK1Q3SY52 487 aaPredicted RBP13□□□□□ -0.33
PRPF40B-211ENST00000551063 TMEM155Q4W5P6 130 aa13□□□□□ -0.33
PRPF40B-211ENST00000551063 SLC25A30Q5SVS4 291 aa13□□□□□ -0.33
PRPF40B-211ENST00000551063 MEDAGQ5VYS4 303 aa13□□□□□ -0.33
PRPF40B-211ENST00000551063 FTMTQ8N4E7 242 aa13□□□□□ -0.33
PRPF40B-211ENST00000551063 SPICQ8N5J4 248 aa13□□□□□ -0.33
PRPF40B-211ENST00000551063 PLPP7Q8NBV4 271 aa13□□□□□ -0.33
PRPF40B-211ENST00000551063 CSNK2A3Q8NEV1 391 aa13□□□□□ -0.33
PRPF40B-211ENST00000551063 OR8B12Q8NGG6 310 aa13□□□□□ -0.33
PRPF40B-211ENST00000551063 OR51G2Q8NGK0 314 aa13□□□□□ -0.33
PRPF40B-211ENST00000551063 Q8TCH9 128 aa13□□□□□ -0.33
PRPF40B-211ENST00000551063 MBOAT4Q96T53 435 aa13□□□□□ -0.33
PRPF40B-211ENST00000551063 SLC29A1Q99808 456 aa13□□□□□ -0.33
PRPF40B-211ENST00000551063 ZNF665Q9H7R5 613 aa13□□□□□ -0.33
PRPF40B-211ENST00000551063 MOB1AQ9H8S9 216 aa13□□□□□ -0.33
PRPF40B-211ENST00000551063 BRD7Q9NPI1 651 aa13□□□□□ -0.33
PRPF40B-211ENST00000551063 FAM206AQ9NX38 181 aa13□□□□□ -0.33
PRPF40B-211ENST00000551063 ZNF319Q9P2F9 582 aa13□□□□□ -0.33
PRPF40B-211ENST00000551063 CDC42EP3Q9UKI2 254 aa13□□□□□ -0.33
PRPF40B-211ENST00000551063 IKZF2Q9UKS7 526 aa13□□□□□ -0.33
PRPF40B-211ENST00000551063 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms