RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 LHFPL3Q86UP9 236 aa13.82□□□□□ -0.2
CHMP1A-209ENST00000550872 ZNF525Q8N782 197 aa13.82□□□□□ -0.2
CHMP1A-209ENST00000550872 UBASH3BQ8TF42 649 aa13.82□□□□□ -0.2
CHMP1A-209ENST00000550872 FBLIM1Q8WUP2 373 aa13.82□□□□□ -0.2
CHMP1A-209ENST00000550872 PPP1R14AQ96A00 147 aa13.82□□□□□ -0.2
CHMP1A-209ENST00000550872 MRPL48Q96GC5 212 aaKnown RBP13.82□□□□□ -0.2
CHMP1A-209ENST00000550872 Q96MF0 132 aa13.82□□□□□ -0.2
CHMP1A-209ENST00000550872 SIGLEC11Q96RL6 698 aa13.82□□□□□ -0.2
CHMP1A-209ENST00000550872 DIRC2Q96SL1 478 aa13.82□□□□□ -0.2
CHMP1A-209ENST00000550872 MYCBPQ99417 103 aaPredicted RBP13.82□□□□□ -0.2
CHMP1A-209ENST00000550872 RGCCQ9H4X1 137 aa13.82□□□□□ -0.2
CHMP1A-209ENST00000550872 DECR2Q9NUI1 292 aa13.82□□□□□ -0.2
CHMP1A-209ENST00000550872 GNG8Q9UK08 70 aa13.82□□□□□ -0.2
CHMP1A-209ENST00000550872 ZDHHC8Q9ULC8 765 aa13.82□□□□□ -0.2
CHMP1A-209ENST00000550872 R4GMQ9 66 aa13.82□□□□□ -0.2
CHMP1A-209ENST00000550872 CHD3Q12873 2000 aaKnown RBP13.81□□□□□ -0.2
CHMP1A-209ENST00000550872 IRGMA1A4Y4 181 aa13.81□□□□□ -0.2
CHMP1A-209ENST00000550872 LILRA1O75019 489 aa13.81□□□□□ -0.2
CHMP1A-209ENST00000550872 SRSF10O75494 262 aaKnown RBP13.81□□□□□ -0.2
CHMP1A-209ENST00000550872 IGHA1P01876 353 aa13.81□□□□□ -0.2
CHMP1A-209ENST00000550872 ADH4P08319 380 aa13.81□□□□□ -0.2
CHMP1A-209ENST00000550872 TACSTD2P09758 323 aa13.81□□□□□ -0.2
CHMP1A-209ENST00000550872 DAOP14920 347 aa13.81□□□□□ -0.2
CHMP1A-209ENST00000550872 PDLIM4P50479 330 aa13.81□□□□□ -0.2
CHMP1A-209ENST00000550872 OR12D2P58182 307 aa13.81□□□□□ -0.2
CHMP1A-209ENST00000550872 FAM3AP98173 230 aa13.81□□□□□ -0.2
CHMP1A-209ENST00000550872 GALEQ14376 348 aa13.81□□□□□ -0.2
CHMP1A-209ENST00000550872 FAM209AQ5JX71 171 aa13.81□□□□□ -0.2
CHMP1A-209ENST00000550872 LAIR2Q6ISS4 152 aa13.81□□□□□ -0.2
CHMP1A-209ENST00000550872 KCTD20Q7Z5Y7 419 aa13.81□□□□□ -0.2
CHMP1A-209ENST00000550872 BPIFB6Q8NFQ5 453 aa13.81□□□□□ -0.2
CHMP1A-209ENST00000550872 OR2Z1Q8NG97 314 aa13.81□□□□□ -0.2
CHMP1A-209ENST00000550872 OR56B2PQ8NGI1 322 aa13.81□□□□□ -0.2
CHMP1A-209ENST00000550872 OR13G1Q8NGZ3 307 aa13.81□□□□□ -0.2
CHMP1A-209ENST00000550872 ELMOD3Q96FG2 381 aa13.81□□□□□ -0.2
CHMP1A-209ENST00000550872 SLC30A2Q9BRI3 323 aa13.81□□□□□ -0.2
CHMP1A-209ENST00000550872 EGLN1Q9GZT9 426 aa13.81□□□□□ -0.2
CHMP1A-209ENST00000550872 FGF20Q9NP95 211 aaPredicted RBP13.81□□□□□ -0.2
CHMP1A-209ENST00000550872 INPP5EQ9NRR6 644 aa13.81□□□□□ -0.2
CHMP1A-209ENST00000550872 TMEM100Q9NV29 134 aa13.81□□□□□ -0.2
CHMP1A-209ENST00000550872 ERVK13-1Q9NX77 482 aa13.81□□□□□ -0.2
CHMP1A-209ENST00000550872 NUFIP1Q9UHK0 495 aaKnown RBP13.81□□□□□ -0.2
CHMP1A-209ENST00000550872 OR52A1Q9UKL2 312 aa13.81□□□□□ -0.2
CHMP1A-209ENST00000550872 SNX5Q9Y5X3 404 aa13.81□□□□□ -0.2
CHMP1A-209ENST00000550872 J3QLW9 94 aa13.8□□□□□ -0.2
CHMP1A-209ENST00000550872 FAM20BO75063 409 aa13.8□□□□□ -0.2
CHMP1A-209ENST00000550872 NCR1O76036 304 aa13.8□□□□□ -0.2
CHMP1A-209ENST00000550872 CSF3P09919 207 aa13.8□□□□□ -0.2
CHMP1A-209ENST00000550872 ZNF19P17023 458 aa13.8□□□□□ -0.2
CHMP1A-209ENST00000550872 TNFSF4P23510 183 aa13.8□□□□□ -0.2
CHMP1A-209ENST00000550872 DCKP27707 260 aa13.8□□□□□ -0.2
CHMP1A-209ENST00000550872 DDOSTP39656 456 aa13.8□□□□□ -0.2
CHMP1A-209ENST00000550872 GSK3AP49840 483 aa13.8□□□□□ -0.2
CHMP1A-209ENST00000550872 DSCR9P59020 149 aa13.8□□□□□ -0.2
CHMP1A-209ENST00000550872 TNFAIP6P98066 277 aaPredicted RBP13.8□□□□□ -0.2
CHMP1A-209ENST00000550872 CDONQ4KMG0 1287 aa13.8□□□□□ -0.2
CHMP1A-209ENST00000550872 BCL2L15Q5TBC7 163 aa13.8□□□□□ -0.2
CHMP1A-209ENST00000550872 COMMD2Q86X83 199 aa13.8□□□□□ -0.2
CHMP1A-209ENST00000550872 TGIF2LYQ8IUE0 185 aa13.8□□□□□ -0.2
CHMP1A-209ENST00000550872 FAM168AQ92567 244 aa13.8□□□□□ -0.2
CHMP1A-209ENST00000550872 RDH5Q92781 318 aa13.8□□□□□ -0.2
CHMP1A-209ENST00000550872 GGHQ92820 318 aa13.8□□□□□ -0.2
CHMP1A-209ENST00000550872 RHNO1Q9BSD3 238 aa13.8□□□□□ -0.2
CHMP1A-209ENST00000550872 ALG8Q9BVK2 526 aa13.8□□□□□ -0.2
CHMP1A-209ENST00000550872 MOB1AQ9H8S9 216 aa13.8□□□□□ -0.2
CHMP1A-209ENST00000550872 MYOZ1Q9NP98 299 aaPredicted RBP13.8□□□□□ -0.2
CHMP1A-209ENST00000550872 G6PC2Q9NQR9 355 aa13.8□□□□□ -0.2
CHMP1A-209ENST00000550872 PLCXD1Q9NUJ7 323 aa13.8□□□□□ -0.2
CHMP1A-209ENST00000550872 ACOXLQ9NUZ1 547 aa13.8□□□□□ -0.2
CHMP1A-209ENST00000550872 ZNF391Q9UJN7 358 aa13.8□□□□□ -0.2
CHMP1A-209ENST00000550872 A0A0U1RQV5 110 aa13.79□□□□□ -0.2
CHMP1A-209ENST00000550872 hCG_38984A0A1B0GV85 526 aa13.79□□□□□ -0.2
CHMP1A-209ENST00000550872 EFCAB10A6NFE3 127 aa13.79□□□□□ -0.2
CHMP1A-209ENST00000550872 LYNX1G3V0Z9 82 aa13.79□□□□□ -0.2
CHMP1A-209ENST00000550872 H0YL77 283 aa13.79□□□□□ -0.2
CHMP1A-209ENST00000550872 XPNPEP2O43895 674 aa13.79□□□□□ -0.2
CHMP1A-209ENST00000550872 TTRP02766 147 aa13.79□□□□□ -0.2
CHMP1A-209ENST00000550872 LYNX1P0DP58 116 aa13.79□□□□□ -0.2
CHMP1A-209ENST00000550872 MYF6P23409 242 aa13.79□□□□□ -0.2
CHMP1A-209ENST00000550872 COL8A2P25067 703 aa13.79□□□□□ -0.2
CHMP1A-209ENST00000550872 PSMB10P40306 273 aa13.79□□□□□ -0.2
CHMP1A-209ENST00000550872 ACTA2P62736 377 aa13.79□□□□□ -0.2
CHMP1A-209ENST00000550872 ACTG2P63267 376 aa13.79□□□□□ -0.2
CHMP1A-209ENST00000550872 C6orf141Q5SZD1 244 aa13.79□□□□□ -0.2
CHMP1A-209ENST00000550872 ELMOD2Q8IZ81 293 aa13.79□□□□□ -0.2
CHMP1A-209ENST00000550872 ZNF786Q8N393 782 aa13.79□□□□□ -0.2
CHMP1A-209ENST00000550872 OR51E1Q8TCB6 317 aa13.79□□□□□ -0.2
CHMP1A-209ENST00000550872 RORBQ92753 470 aa13.79□□□□□ -0.2
CHMP1A-209ENST00000550872 TMEM80Q96HE8 168 aa13.79□□□□□ -0.2
CHMP1A-209ENST00000550872 LYZL4Q96KX0 146 aa13.79□□□□□ -0.2
CHMP1A-209ENST00000550872 C4orf36Q96KX1 117 aa13.79□□□□□ -0.2
CHMP1A-209ENST00000550872 ANKRD60Q9BZ19 345 aa13.79□□□□□ -0.2
CHMP1A-209ENST00000550872 SLC22A4Q9H015 551 aa13.79□□□□□ -0.2
CHMP1A-209ENST00000550872 SAP30LQ9HAJ7 183 aa13.79□□□□□ -0.2
CHMP1A-209ENST00000550872 RAB26Q9ULW5 256 aa13.79□□□□□ -0.2
CHMP1A-209ENST00000550872 SLC22A13Q9Y226 551 aa13.79□□□□□ -0.2
CHMP1A-209ENST00000550872 ITPR3Q14573 2671 aa13.78□□□□□ -0.2
CHMP1A-209ENST00000550872 TRIM64A6NGJ6 449 aa13.78□□□□□ -0.2
CHMP1A-209ENST00000550872 TRIM64BA6NI03 449 aa13.78□□□□□ -0.2
CHMP1A-209ENST00000550872 ANKRD30BLA7E2S9 258 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms