RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 OR4A8P0C604 315 aa11.56□□□□□ -0.56
ERBB3-215ENST00000550828 DANCRP0C864 163 aa11.56□□□□□ -0.56
ERBB3-215ENST00000550828 ACKR3P25106 362 aa11.56□□□□□ -0.56
ERBB3-215ENST00000550828 GBX2P52951 348 aaPredicted RBP11.56□□□□□ -0.56
ERBB3-215ENST00000550828 SPHARQ15513 63 aa11.56□□□□□ -0.56
ERBB3-215ENST00000550828 ODF4Q2M2E3 257 aa11.56□□□□□ -0.56
ERBB3-215ENST00000550828 GFOD2Q3B7J2 385 aa11.56□□□□□ -0.56
ERBB3-215ENST00000550828 MBNL2Q5VZF2 373 aaKnown RBP11.56□□□□□ -0.56
ERBB3-215ENST00000550828 ARL9Q6T311 187 aa11.56□□□□□ -0.56
ERBB3-215ENST00000550828 Q6ZSR3 168 aa11.56□□□□□ -0.56
ERBB3-215ENST00000550828 TSPAN14Q8NG11 270 aa11.56□□□□□ -0.56
ERBB3-215ENST00000550828 OR52H1Q8NGJ2 320 aa11.56□□□□□ -0.56
ERBB3-215ENST00000550828 OR51E1Q8TCB6 317 aa11.56□□□□□ -0.56
ERBB3-215ENST00000550828 IGFBPL1Q8WX77 278 aa11.56□□□□□ -0.56
ERBB3-215ENST00000550828 NRGNQ92686 78 aa11.56□□□□□ -0.56
ERBB3-215ENST00000550828 MRPL24Q96A35 216 aaKnown RBP11.56□□□□□ -0.56
ERBB3-215ENST00000550828 REEP6Q96HR9 211 aa11.56□□□□□ -0.56
ERBB3-215ENST00000550828 PGLYRP3Q96LB9 341 aa11.56□□□□□ -0.56
ERBB3-215ENST00000550828 OPALINQ96PE5 141 aa11.56□□□□□ -0.56
ERBB3-215ENST00000550828 DHRS9Q9BPW9 319 aa11.56□□□□□ -0.56
ERBB3-215ENST00000550828 PDCD1LG2Q9BQ51 273 aa11.56□□□□□ -0.56
ERBB3-215ENST00000550828 REPIN1Q9BWE0 567 aaKnown RBP11.56□□□□□ -0.56
ERBB3-215ENST00000550828 OR10A2Q9H208 303 aa11.56□□□□□ -0.56
ERBB3-215ENST00000550828 MOB1AQ9H8S9 216 aa11.56□□□□□ -0.56
ERBB3-215ENST00000550828 UBTD1Q9HAC8 227 aa11.56□□□□□ -0.56
ERBB3-215ENST00000550828 GPR84Q9NQS5 396 aa11.56□□□□□ -0.56
ERBB3-215ENST00000550828 PNMA8CA0A1B0GUJ8 204 aa11.55□□□□□ -0.56
ERBB3-215ENST00000550828 H3BSA7 217 aa11.55□□□□□ -0.56
ERBB3-215ENST00000550828 XRCC2O43543 280 aa11.55□□□□□ -0.56
ERBB3-215ENST00000550828 INMTO95050 263 aa11.55□□□□□ -0.56
ERBB3-215ENST00000550828 ZFPL1O95159 310 aa11.55□□□□□ -0.56
ERBB3-215ENST00000550828 CD8AP01732 235 aa11.55□□□□□ -0.56
ERBB3-215ENST00000550828 SOD3P08294 240 aa11.55□□□□□ -0.56
ERBB3-215ENST00000550828 CCL1P22362 96 aa11.55□□□□□ -0.56
ERBB3-215ENST00000550828 MAGEB1P43366 347 aa11.55□□□□□ -0.56
ERBB3-215ENST00000550828 FABP6P51161 128 aa11.55□□□□□ -0.56
ERBB3-215ENST00000550828 CCR9P51686 369 aa11.55□□□□□ -0.56
ERBB3-215ENST00000550828 FAM3AP98173 230 aa11.55□□□□□ -0.56
ERBB3-215ENST00000550828 ACSM1Q08AH1 577 aa11.55□□□□□ -0.56
ERBB3-215ENST00000550828 MED22Q15528 200 aa11.55□□□□□ -0.56
ERBB3-215ENST00000550828 TIGD6Q17RP2 521 aa11.55□□□□□ -0.56
ERBB3-215ENST00000550828 UBE2UQ5VVX9 321 aa11.55□□□□□ -0.56
ERBB3-215ENST00000550828 OR2T2Q6IF00 324 aa11.55□□□□□ -0.56
ERBB3-215ENST00000550828 C11orf71Q6IPW1 123 aa11.55□□□□□ -0.56
ERBB3-215ENST00000550828 ZNF367Q7RTV3 350 aa11.55□□□□□ -0.56
ERBB3-215ENST00000550828 TMEM200AQ86VY9 491 aa11.55□□□□□ -0.56
ERBB3-215ENST00000550828 PLPP7Q8NBV4 271 aa11.55□□□□□ -0.56
ERBB3-215ENST00000550828 OR51A4Q8NGJ6 313 aa11.55□□□□□ -0.56
ERBB3-215ENST00000550828 OR13C5Q8NGS8 318 aa11.55□□□□□ -0.56
ERBB3-215ENST00000550828 HAVCR1Q96D42 359 aa11.55□□□□□ -0.56
ERBB3-215ENST00000550828 CMBLQ96DG6 245 aa11.55□□□□□ -0.56
ERBB3-215ENST00000550828 LIME1Q9H400 295 aa11.55□□□□□ -0.56
ERBB3-215ENST00000550828 PPP1R3EQ9H7J1 279 aa11.55□□□□□ -0.56
ERBB3-215ENST00000550828 CMAHPQ9Y471 501 aa11.55□□□□□ -0.56
ERBB3-215ENST00000550828 SPEF1Q9Y4P9 236 aa11.55□□□□□ -0.56
ERBB3-215ENST00000550828 LOC107986453A0A1B0GWG9 222 aa11.54□□□□□ -0.56
ERBB3-215ENST00000550828 ATE1O95260 518 aa11.54□□□□□ -0.56
ERBB3-215ENST00000550828 RAC2P15153 192 aa11.54□□□□□ -0.56
ERBB3-215ENST00000550828 KITLGP21583 273 aa11.54□□□□□ -0.56
ERBB3-215ENST00000550828 SSTR2P30874 369 aa11.54□□□□□ -0.56
ERBB3-215ENST00000550828 APOBEC3AP31941 199 aaPredicted RBP11.54□□□□□ -0.56
ERBB3-215ENST00000550828 TTKP33981 857 aa11.54□□□□□ -0.56
ERBB3-215ENST00000550828 GSK3AP49840 483 aa11.54□□□□□ -0.56
ERBB3-215ENST00000550828 GP2P55259 537 aaKnown RBP11.54□□□□□ -0.56
ERBB3-215ENST00000550828 RPS23P62266 143 aaKnown RBP11.54□□□□□ -0.56
ERBB3-215ENST00000550828 RPS11P62280 158 aaKnown RBP eCLIP11.54□□□□□ -0.56
ERBB3-215ENST00000550828 SLC3A1Q07837 685 aa11.54□□□□□ -0.56
ERBB3-215ENST00000550828 MRPL28Q13084 256 aaKnown RBP11.54□□□□□ -0.56
ERBB3-215ENST00000550828 OR8B8Q15620 311 aa11.54□□□□□ -0.56
ERBB3-215ENST00000550828 EFNB3Q15768 340 aa11.54□□□□□ -0.56
ERBB3-215ENST00000550828 SSX1Q16384 188 aa11.54□□□□□ -0.56
ERBB3-215ENST00000550828 SWI5Q1ZZU3 235 aa11.54□□□□□ -0.56
ERBB3-215ENST00000550828 ZNF718Q3SXZ3 478 aa11.54□□□□□ -0.56
ERBB3-215ENST00000550828 RPL22L1Q6P5R6 122 aaKnown RBP11.54□□□□□ -0.56
ERBB3-215ENST00000550828 Q6ZR03 302 aa11.54□□□□□ -0.56
ERBB3-215ENST00000550828 KCTD8Q6ZWB6 473 aa11.54□□□□□ -0.56
ERBB3-215ENST00000550828 MRPL21Q7Z2W9 205 aaKnown RBP11.54□□□□□ -0.56
ERBB3-215ENST00000550828 DTX2Q86UW9 622 aa11.54□□□□□ -0.56
ERBB3-215ENST00000550828 SVOPQ8N4V2 548 aa11.54□□□□□ -0.56
ERBB3-215ENST00000550828 ZNF611Q8N823 705 aa11.54□□□□□ -0.56
ERBB3-215ENST00000550828 OR56B2PQ8NGI1 322 aa11.54□□□□□ -0.56
ERBB3-215ENST00000550828 OR5L1Q8NGL2 311 aa11.54□□□□□ -0.56
ERBB3-215ENST00000550828 OR14K1Q8NGZ2 314 aa11.54□□□□□ -0.56
ERBB3-215ENST00000550828 SYNPRQ8TBG9 265 aa11.54□□□□□ -0.56
ERBB3-215ENST00000550828 FBXW5Q969U6 566 aa11.54□□□□□ -0.56
ERBB3-215ENST00000550828 SMIM19Q96E16 107 aa11.54□□□□□ -0.56
ERBB3-215ENST00000550828 FAM71F1Q96KD3 344 aaPredicted RBP11.54□□□□□ -0.56
ERBB3-215ENST00000550828 TRIM36Q9NQ86 728 aa11.54□□□□□ -0.56
ERBB3-215ENST00000550828 PURGQ9UJV8 347 aaKnown RBP11.54□□□□□ -0.56
ERBB3-215ENST00000550828 ARID1AO14497 2285 aa11.53□□□□□ -0.56
ERBB3-215ENST00000550828 A0A087WXM4 84 aa11.53□□□□□ -0.56
ERBB3-215ENST00000550828 TRBV2A0A0J9YWF9 115 aa11.53□□□□□ -0.56
ERBB3-215ENST00000550828 ZSCAN5BA6NJL1 495 aa11.53□□□□□ -0.56
ERBB3-215ENST00000550828 CD300LBA8K4G0 201 aa11.53□□□□□ -0.56
ERBB3-215ENST00000550828 IQCF6A8MYZ5 107 aa11.53□□□□□ -0.56
ERBB3-215ENST00000550828 IGHV3-13P01766 116 aa11.53□□□□□ -0.56
ERBB3-215ENST00000550828 ATP6V1B1P15313 513 aa11.53□□□□□ -0.56
ERBB3-215ENST00000550828 SERPINF1P36955 418 aa11.53□□□□□ -0.56
ERBB3-215ENST00000550828 KLF3P57682 345 aaPredicted RBP11.53□□□□□ -0.56
ERBB3-215ENST00000550828 BDH1Q02338 343 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms