RNA–Protein interactions for RNA: ENST00000550771.5

CACNB3-218, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 586 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-218ENST00000550771 TBC1D15Q8TC07 691 aa17.11■□□□□ 0.33
CACNB3-218ENST00000550771 GNPDA2Q8TDQ7 276 aa17.11■□□□□ 0.33
CACNB3-218ENST00000550771 DDOQ99489 341 aa17.11■□□□□ 0.33
CACNB3-218ENST00000550771 CITED1Q99966 193 aa17.11■□□□□ 0.33
CACNB3-218ENST00000550771 TRIM15Q9C019 465 aa17.11■□□□□ 0.33
CACNB3-218ENST00000550771 MYLK2Q9H1R3 596 aa17.11■□□□□ 0.33
CACNB3-218ENST00000550771 OPA3Q9H6K4 179 aa17.11■□□□□ 0.33
CACNB3-218ENST00000550771 SMURF1Q9HCE7 757 aa17.11■□□□□ 0.33
CACNB3-218ENST00000550771 MAGEL2Q9UJ55 1249 aa17.11■□□□□ 0.33
CACNB3-218ENST00000550771 IGHV1-69DA0A0B4J2H0 117 aa17.1■□□□□ 0.33
CACNB3-218ENST00000550771 ECDO95905 644 aaPredicted RBP17.1■□□□□ 0.33
CACNB3-218ENST00000550771 IGHV1-69P01742 117 aa17.1■□□□□ 0.33
CACNB3-218ENST00000550771 PYCR1P32322 319 aa17.1■□□□□ 0.33
CACNB3-218ENST00000550771 SRSF4Q08170 494 aaKnown RBP17.1■□□□□ 0.33
CACNB3-218ENST00000550771 RPL13AP3Q6NVV1 102 aa17.1■□□□□ 0.33
CACNB3-218ENST00000550771 PROKR2Q8NFJ6 384 aa17.1■□□□□ 0.33
CACNB3-218ENST00000550771 DYRK2Q92630 601 aa17.1■□□□□ 0.33
CACNB3-218ENST00000550771 SIRPDQ9H106 197 aa17.1■□□□□ 0.33
CACNB3-218ENST00000550771 IL1RAPQ9NPH3 570 aa17.1■□□□□ 0.33
CACNB3-218ENST00000550771 C1orf123Q9NWV4 160 aa17.1■□□□□ 0.33
CACNB3-218ENST00000550771 PDP1Q9P0J1 537 aaPredicted RBP17.1■□□□□ 0.33
CACNB3-218ENST00000550771 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.09■□□□□ 0.33
CACNB3-218ENST00000550771 LHBP01229 141 aa17.09■□□□□ 0.33
CACNB3-218ENST00000550771 FABP3P05413 133 aa17.09■□□□□ 0.33
CACNB3-218ENST00000550771 HSD17B1P14061 328 aa17.09■□□□□ 0.33
CACNB3-218ENST00000550771 RRM2P31350 389 aa17.09■□□□□ 0.33
CACNB3-218ENST00000550771 RPS27P42677 84 aaKnown RBP17.09■□□□□ 0.33
CACNB3-218ENST00000550771 PGBD2Q6P3X8 592 aa17.09■□□□□ 0.33
CACNB3-218ENST00000550771 BRICD5Q6PL45 260 aa17.09■□□□□ 0.33
CACNB3-218ENST00000550771 GCSAMQ8N6F7 178 aa17.09■□□□□ 0.33
CACNB3-218ENST00000550771 OR52L1Q8NGH7 329 aa17.09■□□□□ 0.33
CACNB3-218ENST00000550771 C14orf119Q9NWQ9 140 aa17.09■□□□□ 0.33
CACNB3-218ENST00000550771 KAAG1Q9UBP8 84 aa17.09■□□□□ 0.33
CACNB3-218ENST00000550771 CD300AQ9UGN4 299 aa17.09■□□□□ 0.33
CACNB3-218ENST00000550771 CDH10Q9Y6N8 788 aa17.09■□□□□ 0.33
CACNB3-218ENST00000550771 C5orf63A6NC05 138 aa17.08■□□□□ 0.32
CACNB3-218ENST00000550771 A6NLC8 198 aa17.08■□□□□ 0.32
CACNB3-218ENST00000550771 BHLHE40O14503 412 aa17.08■□□□□ 0.32
CACNB3-218ENST00000550771 GYPAP02724 150 aa17.08■□□□□ 0.32
CACNB3-218ENST00000550771 GRPP07492 148 aa17.08■□□□□ 0.32
CACNB3-218ENST00000550771 ANOS1P23352 680 aa17.08■□□□□ 0.32
CACNB3-218ENST00000550771 DDOSTP39656 456 aa17.08■□□□□ 0.32
CACNB3-218ENST00000550771 PCK2Q16822 640 aa17.08■□□□□ 0.32
CACNB3-218ENST00000550771 TEX36Q5VZQ5 186 aa17.08■□□□□ 0.32
CACNB3-218ENST00000550771 ZNF826PQ6ZT77 177 aa17.08■□□□□ 0.32
CACNB3-218ENST00000550771 BTN2A1Q7KYR7 527 aa17.08■□□□□ 0.32
CACNB3-218ENST00000550771 DCXRQ7Z4W1 244 aa17.08■□□□□ 0.32
CACNB3-218ENST00000550771 LDLRAD3Q86YD5 345 aa17.08■□□□□ 0.32
CACNB3-218ENST00000550771 FAM90A1Q86YD7 464 aa17.08■□□□□ 0.32
CACNB3-218ENST00000550771 CYB561A3Q8NBI2 242 aa17.08■□□□□ 0.32
CACNB3-218ENST00000550771 OR56B2PQ8NGI1 322 aa17.08■□□□□ 0.32
CACNB3-218ENST00000550771 NSMCE2Q96MF7 247 aa17.08■□□□□ 0.32
CACNB3-218ENST00000550771 KCNJ15Q99712 375 aa17.08■□□□□ 0.32
CACNB3-218ENST00000550771 COPS4Q9BT78 406 aa17.08■□□□□ 0.32
CACNB3-218ENST00000550771 EGLN3Q9H6Z9 239 aa17.08■□□□□ 0.32
CACNB3-218ENST00000550771 ZNF446Q9NWS9 450 aa17.08■□□□□ 0.32
CACNB3-218ENST00000550771 COMMD3-BMI1R4GMX3 469 aa17.08■□□□□ 0.32
CACNB3-218ENST00000550771 hCG_1807616A0A1W2PRN6 198 aa17.07■□□□□ 0.32
CACNB3-218ENST00000550771 TVP23AA6NH52 213 aa17.07■□□□□ 0.32
CACNB3-218ENST00000550771 M0QZ24 198 aa17.07■□□□□ 0.32
CACNB3-218ENST00000550771 DVL1O14640 695 aa17.07■□□□□ 0.32
CACNB3-218ENST00000550771 TIMM23O14925 209 aa17.07■□□□□ 0.32
CACNB3-218ENST00000550771 XRCC2O43543 280 aa17.07■□□□□ 0.32
CACNB3-218ENST00000550771 KRT36O76013 467 aa17.07■□□□□ 0.32
CACNB3-218ENST00000550771 ARF6P62330 175 aa17.07■□□□□ 0.32
CACNB3-218ENST00000550771 HSP90B2PQ58FF3 399 aa17.07■□□□□ 0.32
CACNB3-218ENST00000550771 ZDHHC21Q8IVQ6 265 aa17.07■□□□□ 0.32
CACNB3-218ENST00000550771 ZNRF4Q8WWF5 429 aa17.07■□□□□ 0.32
CACNB3-218ENST00000550771 LHX4Q969G2 390 aa17.07■□□□□ 0.32
CACNB3-218ENST00000550771 SPSB4Q96A44 273 aa17.07■□□□□ 0.32
CACNB3-218ENST00000550771 RASSF4Q9H2L5 321 aa17.07■□□□□ 0.32
CACNB3-218ENST00000550771 MMP27Q9H306 513 aa17.07■□□□□ 0.32
CACNB3-218ENST00000550771 CNTD2Q9H8S5 307 aa17.07■□□□□ 0.32
CACNB3-218ENST00000550771 IL20Q9NYY1 176 aa17.07■□□□□ 0.32
CACNB3-218ENST00000550771 KPTNQ9Y664 436 aa17.07■□□□□ 0.32
CACNB3-218ENST00000550771 FCN3O75636 299 aa17.06■□□□□ 0.32
CACNB3-218ENST00000550771 PSKH1P11801 424 aa17.06■□□□□ 0.32
CACNB3-218ENST00000550771 GRK5P34947 590 aa17.06■□□□□ 0.32
CACNB3-218ENST00000550771 PRKXP51817 358 aa17.06■□□□□ 0.32
CACNB3-218ENST00000550771 HMGA2P52926 109 aa17.06■□□□□ 0.32
CACNB3-218ENST00000550771 TAF13Q15543 124 aa17.06■□□□□ 0.32
CACNB3-218ENST00000550771 LYPD4Q6UWN0 246 aa17.06■□□□□ 0.32
CACNB3-218ENST00000550771 RHOUQ7L0Q8 258 aa17.06■□□□□ 0.32
CACNB3-218ENST00000550771 DMRTB1Q96MA1 342 aa17.06■□□□□ 0.32
CACNB3-218ENST00000550771 CCT8L2Q96SF2 557 aa17.06■□□□□ 0.32
CACNB3-218ENST00000550771 RNPEPL1Q9HAU8 725 aa17.06■□□□□ 0.32
CACNB3-218ENST00000550771 RPUSD1Q9UJJ7 312 aaKnown RBP17.06■□□□□ 0.32
CACNB3-218ENST00000550771 RNF114Q9Y508 228 aa17.06■□□□□ 0.32
CACNB3-218ENST00000550771 ANKRD30BLA7E2S9 258 aa17.05■□□□□ 0.32
CACNB3-218ENST00000550771 GPR137BO60478 399 aa17.05■□□□□ 0.32
CACNB3-218ENST00000550771 SPARCP09486 303 aa17.05■□□□□ 0.32
CACNB3-218ENST00000550771 MUC1P15941 1255 aaPredicted RBP17.05■□□□□ 0.32
CACNB3-218ENST00000550771 FMO3P31513 532 aa17.05■□□□□ 0.32
CACNB3-218ENST00000550771 IER3P46695 156 aa17.05■□□□□ 0.32
CACNB3-218ENST00000550771 ENTPD1P49961 510 aa17.05■□□□□ 0.32
CACNB3-218ENST00000550771 CDONQ4KMG0 1287 aa17.05■□□□□ 0.32
CACNB3-218ENST00000550771 TEX30Q5JUR7 227 aa17.05■□□□□ 0.32
CACNB3-218ENST00000550771 SAMD4BQ5PRF9 694 aaKnown RBP17.05■□□□□ 0.32
CACNB3-218ENST00000550771 LINC00471Q8N535 108 aa17.05■□□□□ 0.32
CACNB3-218ENST00000550771 SCCPDHQ8NBX0 429 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms