RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 OR51E1Q8TCB6 317 aa12.2□□□□□ -0.46
CACNB3-216ENST00000550391 RGP1Q92546 391 aaPredicted RBP12.2□□□□□ -0.46
CACNB3-216ENST00000550391 PHYHIPQ92561 330 aa12.2□□□□□ -0.46
CACNB3-216ENST00000550391 THRSPQ92748 146 aa12.2□□□□□ -0.46
CACNB3-216ENST00000550391 RPL3LQ92901 407 aaKnown RBP12.2□□□□□ -0.46
CACNB3-216ENST00000550391 ISOC1Q96CN7 298 aa12.2□□□□□ -0.46
CACNB3-216ENST00000550391 WFIKKN1Q96NZ8 548 aa12.2□□□□□ -0.46
CACNB3-216ENST00000550391 MED18Q9BUE0 208 aa12.2□□□□□ -0.46
CACNB3-216ENST00000550391 RGCCQ9H4X1 137 aa12.2□□□□□ -0.46
CACNB3-216ENST00000550391 TBCCD1Q9NVR7 557 aa12.2□□□□□ -0.46
CACNB3-216ENST00000550391 NDRG3Q9UGV2 375 aa12.2□□□□□ -0.46
CACNB3-216ENST00000550391 RSL24D1Q9UHA3 163 aaKnown RBP12.2□□□□□ -0.46
CACNB3-216ENST00000550391 ZNF391Q9UJN7 358 aa12.2□□□□□ -0.46
CACNB3-216ENST00000550391 GSTK1Q9Y2Q3 226 aa12.2□□□□□ -0.46
CACNB3-216ENST00000550391 TRBV5-5A0A0J9YX44 114 aa12.19□□□□□ -0.46
CACNB3-216ENST00000550391 A0A1B0GTI1 187 aa12.19□□□□□ -0.46
CACNB3-216ENST00000550391 LOC107986453A0A1B0GWG9 222 aa12.19□□□□□ -0.46
CACNB3-216ENST00000550391 ZNF879B4DU55 563 aa12.19□□□□□ -0.46
CACNB3-216ENST00000550391 J3QW42 95 aa12.19□□□□□ -0.46
CACNB3-216ENST00000550391 GABRPO00591 440 aa12.19□□□□□ -0.46
CACNB3-216ENST00000550391 XRCC2O43543 280 aa12.19□□□□□ -0.46
CACNB3-216ENST00000550391 SYT7O43581 403 aa12.19□□□□□ -0.46
CACNB3-216ENST00000550391 ICMTO60725 284 aa12.19□□□□□ -0.46
CACNB3-216ENST00000550391 SC5DO75845 299 aa12.19□□□□□ -0.46
CACNB3-216ENST00000550391 IGLV3-1P01715 115 aa12.19□□□□□ -0.46
CACNB3-216ENST00000550391 ZNF35P13682 527 aa12.19□□□□□ -0.46
CACNB3-216ENST00000550391 ZNF12P17014 697 aa12.19□□□□□ -0.46
CACNB3-216ENST00000550391 PCSK6P29122 969 aa12.19□□□□□ -0.46
CACNB3-216ENST00000550391 FGF9P31371 208 aaPredicted RBP12.19□□□□□ -0.46
CACNB3-216ENST00000550391 WNT5AP41221 380 aa12.19□□□□□ -0.46
CACNB3-216ENST00000550391 LSM3P62310 102 aaKnown RBP12.19□□□□□ -0.46
CACNB3-216ENST00000550391 MALLQ13021 153 aa12.19□□□□□ -0.46
CACNB3-216ENST00000550391 CTF1Q16619 201 aa12.19□□□□□ -0.46
CACNB3-216ENST00000550391 Q499Y3 187 aa12.19□□□□□ -0.46
CACNB3-216ENST00000550391 FOXB2Q5VYV0 432 aa12.19□□□□□ -0.46
CACNB3-216ENST00000550391 UNQ9370/PRO34162Q6UXP9 181 aa12.19□□□□□ -0.46
CACNB3-216ENST00000550391 UNQ6126/PRO20091Q6UXV3 157 aa12.19□□□□□ -0.46
CACNB3-216ENST00000550391 SPNS3Q6ZMD2 512 aa12.19□□□□□ -0.46
CACNB3-216ENST00000550391 COMMD2Q86X83 199 aa12.19□□□□□ -0.46
CACNB3-216ENST00000550391 WFDC8Q8IUA0 241 aa12.19□□□□□ -0.46
CACNB3-216ENST00000550391 CCDC54Q8NEL0 328 aa12.19□□□□□ -0.46
CACNB3-216ENST00000550391 OR5L1Q8NGL2 311 aa12.19□□□□□ -0.46
CACNB3-216ENST00000550391 SGK3Q96BR1 496 aa12.19□□□□□ -0.46
CACNB3-216ENST00000550391 TRMT61AQ96FX7 289 aaKnown RBP12.19□□□□□ -0.46
CACNB3-216ENST00000550391 KCNS3Q9BQ31 491 aa12.19□□□□□ -0.46
CACNB3-216ENST00000550391 NGBQ9NPG2 151 aa12.19□□□□□ -0.46
CACNB3-216ENST00000550391 GPR84Q9NQS5 396 aa12.19□□□□□ -0.46
CACNB3-216ENST00000550391 TXNL4BQ9NX01 149 aaKnown RBP12.19□□□□□ -0.46
CACNB3-216ENST00000550391 HCFC1P51610 2035 aa12.19□□□□□ -0.46
CACNB3-216ENST00000550391 PRR14LQ5THK1 2151 aa12.18□□□□□ -0.46
CACNB3-216ENST00000550391 NIPBLQ6KC79 2804 aaeCLIP12.18□□□□□ -0.46
CACNB3-216ENST00000550391 IGHV2OR16-5A0A0B4J2B6 119 aa12.18□□□□□ -0.46
CACNB3-216ENST00000550391 ATE1O95260 518 aa12.18□□□□□ -0.46
CACNB3-216ENST00000550391 OCM2P0CE71 109 aa12.18□□□□□ -0.46
CACNB3-216ENST00000550391 CCL1P22362 96 aa12.18□□□□□ -0.46
CACNB3-216ENST00000550391 CFL1P23528 166 aaKnown RBP12.18□□□□□ -0.46
CACNB3-216ENST00000550391 MAPK3P27361 379 aaPredicted RBP12.18□□□□□ -0.46
CACNB3-216ENST00000550391 NAAAQ02083 359 aa12.18□□□□□ -0.46
CACNB3-216ENST00000550391 GFOD2Q3B7J2 385 aa12.18□□□□□ -0.46
CACNB3-216ENST00000550391 ZMAT1Q5H9K5 638 aa12.18□□□□□ -0.46
CACNB3-216ENST00000550391 GLYATL3Q5SZD4 288 aa12.18□□□□□ -0.46
CACNB3-216ENST00000550391 C22orf42Q6IC83 251 aa12.18□□□□□ -0.46
CACNB3-216ENST00000550391 DOK3Q7L591 496 aa12.18□□□□□ -0.46
CACNB3-216ENST00000550391 PLPP7Q8NBV4 271 aa12.18□□□□□ -0.46
CACNB3-216ENST00000550391 OR51A4Q8NGJ6 313 aa12.18□□□□□ -0.46
CACNB3-216ENST00000550391 OR10AC1Q8NH08 325 aa12.18□□□□□ -0.46
CACNB3-216ENST00000550391 TSEN15Q8WW01 171 aaKnown RBP12.18□□□□□ -0.46
CACNB3-216ENST00000550391 AKAP1Q92667 903 aaKnown RBP eCLIP12.18□□□□□ -0.46
CACNB3-216ENST00000550391 ZC3HAV1LQ96H79 300 aaKnown RBP12.18□□□□□ -0.46
CACNB3-216ENST00000550391 REEP6Q96HR9 211 aa12.18□□□□□ -0.46
CACNB3-216ENST00000550391 LYZL4Q96KX0 146 aa12.18□□□□□ -0.46
CACNB3-216ENST00000550391 OR14A2Q96R54 314 aa12.18□□□□□ -0.46
CACNB3-216ENST00000550391 CENPOQ9BU64 300 aa12.18□□□□□ -0.46
CACNB3-216ENST00000550391 STARD10Q9Y365 291 aa12.18□□□□□ -0.46
CACNB3-216ENST00000550391 HEATR1Q9H583 2144 aaKnown RBP12.17□□□□□ -0.46
CACNB3-216ENST00000550391 H3BMQ9 156 aa12.17□□□□□ -0.46
CACNB3-216ENST00000550391 H3BSH0 61 aa12.17□□□□□ -0.46
CACNB3-216ENST00000550391 SLC22A1O15245 554 aa12.17□□□□□ -0.46
CACNB3-216ENST00000550391 MTRF1O75570 445 aaKnown RBP12.17□□□□□ -0.46
CACNB3-216ENST00000550391 NGFP01138 241 aa12.17□□□□□ -0.46
CACNB3-216ENST00000550391 CRYAAP02489 173 aa12.17□□□□□ -0.46
CACNB3-216ENST00000550391 RAF1P04049 648 aa12.17□□□□□ -0.46
CACNB3-216ENST00000550391 CD2P06729 351 aa12.17□□□□□ -0.46
CACNB3-216ENST00000550391 CD40P25942 277 aa12.17□□□□□ -0.46
CACNB3-216ENST00000550391 CALCRP30988 508 aa12.17□□□□□ -0.46
CACNB3-216ENST00000550391 RAD52P43351 418 aa12.17□□□□□ -0.46
CACNB3-216ENST00000550391 SOX2P48431 317 aa12.17□□□□□ -0.46
CACNB3-216ENST00000550391 UCP2P55851 309 aa12.17□□□□□ -0.46
CACNB3-216ENST00000550391 NCS1P62166 190 aa12.17□□□□□ -0.46
CACNB3-216ENST00000550391 INSL4Q14641 139 aa12.17□□□□□ -0.46
CACNB3-216ENST00000550391 TMEM108Q6UXF1 575 aa12.17□□□□□ -0.46
CACNB3-216ENST00000550391 Q6ZSR3 168 aa12.17□□□□□ -0.46
CACNB3-216ENST00000550391 C1orf174Q8IYL3 243 aa12.17□□□□□ -0.46
CACNB3-216ENST00000550391 ZNF101Q8IZC7 436 aa12.17□□□□□ -0.46
CACNB3-216ENST00000550391 OR13C3Q8NGS6 347 aa12.17□□□□□ -0.46
CACNB3-216ENST00000550391 OR2AE1Q8NHA4 323 aa12.17□□□□□ -0.46
CACNB3-216ENST00000550391 ITFG2Q969R8 447 aa12.17□□□□□ -0.46
CACNB3-216ENST00000550391 SPSB4Q96A44 273 aa12.17□□□□□ -0.46
CACNB3-216ENST00000550391 C12orf43Q96C57 262 aaKnown RBP12.17□□□□□ -0.46
CACNB3-216ENST00000550391 FAM71F1Q96KD3 344 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms