RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 GJC3Q8NFK1 279 aa11.4□□□□□ -0.58
NUP188-211ENST00000550219 FAHD2AQ96GK7 314 aa11.4□□□□□ -0.58
NUP188-211ENST00000550219 MAP6Q96JE9 813 aa11.4□□□□□ -0.58
NUP188-211ENST00000550219 OR2H1Q9GZK4 316 aa11.4□□□□□ -0.58
NUP188-211ENST00000550219 WNT5BQ9H1J7 359 aa11.4□□□□□ -0.58
NUP188-211ENST00000550219 ZNF665Q9H7R5 613 aa11.4□□□□□ -0.58
NUP188-211ENST00000550219 SAP30LQ9HAJ7 183 aa11.4□□□□□ -0.58
NUP188-211ENST00000550219 PNRC2Q9NPJ4 139 aaKnown RBP11.4□□□□□ -0.58
NUP188-211ENST00000550219 INPP5EQ9NRR6 644 aa11.4□□□□□ -0.58
NUP188-211ENST00000550219 PAK1IP1Q9NWT1 392 aaPredicted RBP11.4□□□□□ -0.58
NUP188-211ENST00000550219 BLOC1S6Q9UL45 172 aa11.4□□□□□ -0.58
NUP188-211ENST00000550219 DIMT1Q9UNQ2 313 aaKnown RBP11.4□□□□□ -0.58
NUP188-211ENST00000550219 COPS3Q9UNS2 423 aa11.4□□□□□ -0.58
NUP188-211ENST00000550219 MYRFQ9Y2G1 1151 aa11.4□□□□□ -0.58
NUP188-211ENST00000550219 KLHDC2Q9Y2U9 406 aa11.4□□□□□ -0.58
NUP188-211ENST00000550219 TMEM14AQ9Y6G1 99 aa11.4□□□□□ -0.58
NUP188-211ENST00000550219 A0A1W2PQL4 384 aaPredicted RBP11.39□□□□□ -0.59
NUP188-211ENST00000550219 PHYHO14832 338 aa11.39□□□□□ -0.59
NUP188-211ENST00000550219 RER1O15258 196 aa11.39□□□□□ -0.59
NUP188-211ENST00000550219 VENTXO95231 258 aa11.39□□□□□ -0.59
NUP188-211ENST00000550219 PNPP00491 289 aa11.39□□□□□ -0.59
NUP188-211ENST00000550219 CDK1P06493 297 aa11.39□□□□□ -0.59
NUP188-211ENST00000550219 ATP6V1E1P36543 226 aa11.39□□□□□ -0.59
NUP188-211ENST00000550219 MPV17P39210 176 aa11.39□□□□□ -0.59
NUP188-211ENST00000550219 WNT5AP41221 380 aa11.39□□□□□ -0.59
NUP188-211ENST00000550219 GDI2P50395 445 aaKnown RBP11.39□□□□□ -0.59
NUP188-211ENST00000550219 ZNF81P51508 661 aa11.39□□□□□ -0.59
NUP188-211ENST00000550219 GABARAPL2P60520 117 aa11.39□□□□□ -0.59
NUP188-211ENST00000550219 LMO4P61968 165 aa11.39□□□□□ -0.59
NUP188-211ENST00000550219 ACTC1P68032 377 aa11.39□□□□□ -0.59
NUP188-211ENST00000550219 ACTA1P68133 377 aa11.39□□□□□ -0.59
NUP188-211ENST00000550219 ZNF85Q03923 595 aa11.39□□□□□ -0.59
NUP188-211ENST00000550219 ST3GAL4Q11206 333 aa11.39□□□□□ -0.59
NUP188-211ENST00000550219 KRTAP27-1Q3LI81 207 aa11.39□□□□□ -0.59
NUP188-211ENST00000550219 CCDC92Q53HC0 331 aaPredicted RBP11.39□□□□□ -0.59
NUP188-211ENST00000550219 ZNF684Q5T5D7 378 aa11.39□□□□□ -0.59
NUP188-211ENST00000550219 RNLSQ5VYX0 342 aa11.39□□□□□ -0.59
NUP188-211ENST00000550219 CFAP77Q6ZQR2 320 aa11.39□□□□□ -0.59
NUP188-211ENST00000550219 RFPL4BQ6ZWI9 263 aa11.39□□□□□ -0.59
NUP188-211ENST00000550219 VASH1Q7L8A9 365 aaPredicted RBP11.39□□□□□ -0.59
NUP188-211ENST00000550219 DCXRQ7Z4W1 244 aa11.39□□□□□ -0.59
NUP188-211ENST00000550219 EGFL6Q8IUX8 553 aa11.39□□□□□ -0.59
NUP188-211ENST00000550219 ZNF101Q8IZC7 436 aa11.39□□□□□ -0.59
NUP188-211ENST00000550219 OR10S1Q8NGN2 331 aa11.39□□□□□ -0.59
NUP188-211ENST00000550219 OR2AJ1Q8NGZ0 328 aa11.39□□□□□ -0.59
NUP188-211ENST00000550219 ABHD4Q8TB40 342 aa11.39□□□□□ -0.59
NUP188-211ENST00000550219 RNF133Q8WVZ7 376 aa11.39□□□□□ -0.59
NUP188-211ENST00000550219 ASB17Q8WXJ9 295 aa11.39□□□□□ -0.59
NUP188-211ENST00000550219 RAB39BQ96DA2 213 aa11.39□□□□□ -0.59
NUP188-211ENST00000550219 TMEM80Q96HE8 168 aa11.39□□□□□ -0.59
NUP188-211ENST00000550219 AMELYQ99218 206 aa11.39□□□□□ -0.59
NUP188-211ENST00000550219 COPS4Q9BT78 406 aa11.39□□□□□ -0.59
NUP188-211ENST00000550219 ABHD6Q9BV23 337 aa11.39□□□□□ -0.59
NUP188-211ENST00000550219 DDX28Q9NUL7 540 aaKnown RBP11.39□□□□□ -0.59
NUP188-211ENST00000550219 EIF3KQ9UBQ5 218 aaKnown RBP11.39□□□□□ -0.59
NUP188-211ENST00000550219 LAMP5Q9UJQ1 280 aa11.39□□□□□ -0.59
NUP188-211ENST00000550219 POLR1DQ9Y2S0 133 aa11.39□□□□□ -0.59
NUP188-211ENST00000550219 WIPI2Q9Y4P8 454 aa11.39□□□□□ -0.59
NUP188-211ENST00000550219 SVEP1Q4LDE5 3571 aa11.38□□□□□ -0.59
NUP188-211ENST00000550219 LOC105371242A0A075B767 164 aa11.38□□□□□ -0.59
NUP188-211ENST00000550219 TRAV20A0A0B4J274 112 aa11.38□□□□□ -0.59
NUP188-211ENST00000550219 PLSCR5A0PG75 271 aa11.38□□□□□ -0.59
NUP188-211ENST00000550219 ISPDA4D126 451 aa11.38□□□□□ -0.59
NUP188-211ENST00000550219 OR6C6A6NF89 314 aa11.38□□□□□ -0.59
NUP188-211ENST00000550219 PRR32B1ATL7 298 aa11.38□□□□□ -0.59
NUP188-211ENST00000550219 PTGES3LE9PB15 166 aa11.38□□□□□ -0.59
NUP188-211ENST00000550219 ZNF670-ZNF695F2Z2N8 137 aa11.38□□□□□ -0.59
NUP188-211ENST00000550219 SGCEO43556 437 aa11.38□□□□□ -0.59
NUP188-211ENST00000550219 MRPS14O60783 128 aaKnown RBP11.38□□□□□ -0.59
NUP188-211ENST00000550219 LYNP07948 512 aa11.38□□□□□ -0.59
NUP188-211ENST00000550219 COX5BP10606 129 aa11.38□□□□□ -0.59
NUP188-211ENST00000550219 C21orf33P30042 268 aaPredicted RBP11.38□□□□□ -0.59
NUP188-211ENST00000550219 ACTG1P63261 375 aa11.38□□□□□ -0.59
NUP188-211ENST00000550219 ROM1Q03395 351 aa11.38□□□□□ -0.59
NUP188-211ENST00000550219 EGR3Q06889 387 aa11.38□□□□□ -0.59
NUP188-211ENST00000550219 EIF2B1Q14232 305 aaKnown RBP11.38□□□□□ -0.59
NUP188-211ENST00000550219 MOGQ16653 247 aa11.38□□□□□ -0.59
NUP188-211ENST00000550219 HFEQ30201 348 aa11.38□□□□□ -0.59
NUP188-211ENST00000550219 ZNF718Q3SXZ3 478 aa11.38□□□□□ -0.59
NUP188-211ENST00000550219 KCTD21Q4G0X4 260 aa11.38□□□□□ -0.59
NUP188-211ENST00000550219 DEGS2Q6QHC5 323 aa11.38□□□□□ -0.59
NUP188-211ENST00000550219 C12orf54Q6X4T0 127 aa11.38□□□□□ -0.59
NUP188-211ENST00000550219 AHSA2Q719I0 299 aa11.38□□□□□ -0.59
NUP188-211ENST00000550219 OR10H4Q8NGA5 316 aa11.38□□□□□ -0.59
NUP188-211ENST00000550219 SLC25A40Q8TBP6 338 aa11.38□□□□□ -0.59
NUP188-211ENST00000550219 SGCDQ92629 289 aa11.38□□□□□ -0.59
NUP188-211ENST00000550219 MYDGFQ969H8 173 aa11.38□□□□□ -0.59
NUP188-211ENST00000550219 ELMOD3Q96FG2 381 aa11.38□□□□□ -0.59
NUP188-211ENST00000550219 TIMD4Q96H15 378 aa11.38□□□□□ -0.59
NUP188-211ENST00000550219 NR1H4Q96RI1 486 aaPredicted RBP11.38□□□□□ -0.59
NUP188-211ENST00000550219 GAL3ST1Q99999 423 aa11.38□□□□□ -0.59
NUP188-211ENST00000550219 CDCA4Q9BXL8 241 aa11.38□□□□□ -0.59
NUP188-211ENST00000550219 OR2J1Q9GZK6 312 aa11.38□□□□□ -0.59
NUP188-211ENST00000550219 ERVK13-1Q9NX77 482 aa11.38□□□□□ -0.59
NUP188-211ENST00000550219 ATPIF1Q9UII2 106 aa11.38□□□□□ -0.59
NUP188-211ENST00000550219 EXOSC1Q9Y3B2 195 aaKnown RBP11.38□□□□□ -0.59
NUP188-211ENST00000550219 LOC100509620A0A075B734 347 aa11.37□□□□□ -0.59
NUP188-211ENST00000550219 ZSCAN5BA6NJL1 495 aa11.37□□□□□ -0.59
NUP188-211ENST00000550219 IGHV1-46P01743 117 aa11.37□□□□□ -0.59
NUP188-211ENST00000550219 IGHV3-13P01766 116 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms