RNA–Protein interactions for RNA: ENST00000549414.6

CUX1-213, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-213ENST00000549414 OR2AE1Q8NHA4 323 aa14.56□□□□□ -0.08
CUX1-213ENST00000549414 YIPF5Q969M3 257 aa14.56□□□□□ -0.08
CUX1-213ENST00000549414 CNTNAP3BQ96NU0 1288 aa14.56□□□□□ -0.08
CUX1-213ENST00000549414 MOB1AQ9H8S9 216 aa14.56□□□□□ -0.08
CUX1-213ENST00000549414 TIMM10BQ9Y5J6 103 aa14.56□□□□□ -0.08
CUX1-213ENST00000549414 GABRA2P47869 451 aa14.56□□□□□ -0.08
CUX1-213ENST00000549414 IDH3GP51553 393 aaPredicted RBP14.56□□□□□ -0.08
CUX1-213ENST00000549414 RPS27AP62979 156 aaKnown RBP14.56□□□□□ -0.08
CUX1-213ENST00000549414 UBA52P62987 128 aaKnown RBP14.56□□□□□ -0.08
CUX1-213ENST00000549414 AKR1C1Q04828 323 aa14.56□□□□□ -0.08
CUX1-213ENST00000549414 EXOSC3Q9NQT5 275 aaKnown RBP14.56□□□□□ -0.08
CUX1-213ENST00000549414 TRPM7Q96QT4 1865 aa14.56□□□□□ -0.08
CUX1-213ENST00000549414 ABCA1O95477 2261 aa14.56□□□□□ -0.08
CUX1-213ENST00000549414 H3BMH7 237 aa14.56□□□□□ -0.08
CUX1-213ENST00000549414 HS3ST1O14792 307 aa14.56□□□□□ -0.08
CUX1-213ENST00000549414 PTP4A3O75365 173 aa14.56□□□□□ -0.08
CUX1-213ENST00000549414 PDGFAP04085 211 aa14.56□□□□□ -0.08
CUX1-213ENST00000549414 MGMTP16455 207 aa14.56□□□□□ -0.08
CUX1-213ENST00000549414 SLC51BQ86UW2 128 aa14.56□□□□□ -0.08
CUX1-213ENST00000549414 ZNF680Q8NEM1 530 aa14.56□□□□□ -0.08
CUX1-213ENST00000549414 C1orf123Q9NWV4 160 aa14.56□□□□□ -0.08
CUX1-213ENST00000549414 DOCK8Q8NF50 2099 aa14.56□□□□□ -0.08
CUX1-213ENST00000549414 TRAV8-7A0A075B6U6 113 aa14.56□□□□□ -0.08
CUX1-213ENST00000549414 A0A1B0GUH1 482 aa14.56□□□□□ -0.08
CUX1-213ENST00000549414 DCTN6O00399 190 aa14.56□□□□□ -0.08
CUX1-213ENST00000549414 SPRY1O43609 319 aaPredicted RBP14.56□□□□□ -0.08
CUX1-213ENST00000549414 M6PRP20645 277 aa14.56□□□□□ -0.08
CUX1-213ENST00000549414 OR51A2Q8NGJ7 313 aa14.56□□□□□ -0.08
CUX1-213ENST00000549414 RDH5Q92781 318 aa14.56□□□□□ -0.08
CUX1-213ENST00000549414 ZNF2Q9BSG1 426 aaPredicted RBP14.56□□□□□ -0.08
CUX1-213ENST00000549414 TRIM64A6NGJ6 449 aa14.55□□□□□ -0.08
CUX1-213ENST00000549414 HSPB2A8KAH6 182 aa14.55□□□□□ -0.08
CUX1-213ENST00000549414 NXPH2O95156 264 aa14.55□□□□□ -0.08
CUX1-213ENST00000549414 MT-CO3P00414 261 aa14.55□□□□□ -0.08
CUX1-213ENST00000549414 SIGLEC14Q08ET2 396 aa14.55□□□□□ -0.08
CUX1-213ENST00000549414 CLINT1Q14677 625 aa14.55□□□□□ -0.08
CUX1-213ENST00000549414 HSPB2Q16082 182 aa14.55□□□□□ -0.08
CUX1-213ENST00000549414 PRSS35Q8N3Z0 413 aa14.55□□□□□ -0.08
CUX1-213ENST00000549414 HSD17B11Q8NBQ5 300 aa14.55□□□□□ -0.08
CUX1-213ENST00000549414 WDR89Q96FK6 387 aaPredicted RBP14.55□□□□□ -0.08
CUX1-213ENST00000549414 REEP6Q96HR9 211 aa14.55□□□□□ -0.08
CUX1-213ENST00000549414 PCDHB10Q9UN67 800 aa14.55□□□□□ -0.08
CUX1-213ENST00000549414 SLCO1B1Q9Y6L6 691 aa14.55□□□□□ -0.08
CUX1-213ENST00000549414 OGG1O15527 345 aa14.55□□□□□ -0.08
CUX1-213ENST00000549414 BPNT1O95861 308 aa14.55□□□□□ -0.08
CUX1-213ENST00000549414 NRASP01111 189 aa14.55□□□□□ -0.08
CUX1-213ENST00000549414 SERPINF1P36955 418 aa14.55□□□□□ -0.08
CUX1-213ENST00000549414 ESCO2Q56NI9 601 aa14.55□□□□□ -0.08
CUX1-213ENST00000549414 RNLSQ5VYX0 342 aa14.55□□□□□ -0.08
CUX1-213ENST00000549414 NLRC3Q7RTR2 1065 aa14.55□□□□□ -0.08
CUX1-213ENST00000549414 BPHLQ86WA6 291 aaPredicted RBP14.55□□□□□ -0.08
CUX1-213ENST00000549414 ZFP57Q9NU63 452 aa14.55□□□□□ -0.08
CUX1-213ENST00000549414 TAS2R5Q9NYW4 299 aa14.55□□□□□ -0.08
CUX1-213ENST00000549414 OR52N4Q8NGI2 321 aa14.55□□□□□ -0.08
CUX1-213ENST00000549414 OR1J2Q8NGS2 313 aa14.55□□□□□ -0.08
CUX1-213ENST00000549414 OR10R2Q8NGX6 335 aa14.55□□□□□ -0.08
CUX1-213ENST00000549414 MCHR2Q969V1 340 aa14.55□□□□□ -0.08
CUX1-213ENST00000549414 NGFRP08138 427 aa14.55□□□□□ -0.08
CUX1-213ENST00000549414 AVPR2P30518 371 aa14.55□□□□□ -0.08
CUX1-213ENST00000549414 DSCR4P56555 118 aaPredicted RBP14.55□□□□□ -0.08
CUX1-213ENST00000549414 NANOS3P60323 173 aaKnown RBP14.55□□□□□ -0.08
CUX1-213ENST00000549414 AADACL3Q5VUY0 350 aa14.55□□□□□ -0.08
CUX1-213ENST00000549414 SLC25A26Q70HW3 274 aa14.55□□□□□ -0.08
CUX1-213ENST00000549414 SAV1Q9H4B6 383 aaPredicted RBP14.55□□□□□ -0.08
CUX1-213ENST00000549414 OR5H14A6NHG9 310 aa14.54□□□□□ -0.08
CUX1-213ENST00000549414 ACTL6BO94805 426 aa14.54□□□□□ -0.08
CUX1-213ENST00000549414 EPPINO95925 133 aa14.54□□□□□ -0.08
CUX1-213ENST00000549414 SPINK2P20155 84 aa14.54□□□□□ -0.08
CUX1-213ENST00000549414 PLA2G7Q13093 441 aa14.54□□□□□ -0.08
CUX1-213ENST00000549414 CLN3Q13286 438 aa14.54□□□□□ -0.08
CUX1-213ENST00000549414 EXOSC2Q13868 293 aaKnown RBP14.54□□□□□ -0.08
CUX1-213ENST00000549414 IL11RAQ14626 422 aa14.54□□□□□ -0.08
CUX1-213ENST00000549414 ELFN2Q5R3F8 820 aa14.54□□□□□ -0.08
CUX1-213ENST00000549414 TRILQ7L0X0 811 aa14.54□□□□□ -0.08
CUX1-213ENST00000549414 ST6GAL2Q96JF0 529 aa14.54□□□□□ -0.08
CUX1-213ENST00000549414 MARVELD1Q9BSK0 173 aa14.54□□□□□ -0.08
CUX1-213ENST00000549414 BCO1Q9HAY6 547 aa14.54□□□□□ -0.08
CUX1-213ENST00000549414 KLHDC2Q9Y2U9 406 aa14.54□□□□□ -0.08
CUX1-213ENST00000549414 TMEM272A0A1B0GTI8 110 aa14.54□□□□□ -0.08
CUX1-213ENST00000549414 TIMM8AO60220 97 aaPredicted RBP14.54□□□□□ -0.08
CUX1-213ENST00000549414 PPIAP62937 165 aaKnown RBP14.54□□□□□ -0.08
CUX1-213ENST00000549414 MFGE8Q08431 387 aaPredicted RBP14.54□□□□□ -0.08
CUX1-213ENST00000549414 TIGD3Q6B0B8 471 aa14.54□□□□□ -0.08
CUX1-213ENST00000549414 ST8SIA4Q92187 359 aa14.54□□□□□ -0.08
CUX1-213ENST00000549414 GDF15Q99988 308 aa14.54□□□□□ -0.08
CUX1-213ENST00000549414 ZNF649Q9BS31 505 aa14.54□□□□□ -0.08
CUX1-213ENST00000549414 ZSWIM8A7E2V4 1837 aa14.54□□□□□ -0.08
CUX1-213ENST00000549414 DIDO1Q9BTC0 2240 aaKnown RBP14.54□□□□□ -0.08
CUX1-213ENST00000549414 OR5H15A6NDH6 313 aa14.54□□□□□ -0.08
CUX1-213ENST00000549414 CTAG2O75638 210 aa14.54□□□□□ -0.08
CUX1-213ENST00000549414 SMIM10L1P0DMW3 83 aa14.54□□□□□ -0.08
CUX1-213ENST00000549414 DUSP1P28562 367 aa14.54□□□□□ -0.08
CUX1-213ENST00000549414 SLC10A1Q14973 349 aa14.54□□□□□ -0.08
CUX1-213ENST00000549414 OR52H1Q8NGJ2 320 aa14.54□□□□□ -0.08
CUX1-213ENST00000549414 ZNF721Q8TF20 911 aa14.54□□□□□ -0.08
CUX1-213ENST00000549414 SMIM10Q96HG1 83 aa14.54□□□□□ -0.08
CUX1-213ENST00000549414 ZNF416Q9BWM5 594 aa14.54□□□□□ -0.08
CUX1-213ENST00000549414 OR4C45A6NMZ5 311 aa14.53□□□□□ -0.08
CUX1-213ENST00000549414 ZIC2O95409 532 aaPredicted RBP14.53□□□□□ -0.08
CUX1-213ENST00000549414 PDGFBP01127 241 aaPredicted RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms