RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 ZNF222Q9UK12 451 aa4.21□□□□□ -1.74
SCAF11-212ENST00000549162 ADAM18Q9Y3Q7 739 aa4.21□□□□□ -1.74
SCAF11-212ENST00000549162 TUBAL3A6NHL2 446 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 GLOD5A6NK44 160 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 NOTOA8MTQ0 251 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 SSX5O60225 188 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 ZNF780AO75290 641 aaPredicted RBP4.2□□□□□ -1.74
SCAF11-212ENST00000549162 CHRM2P08172 466 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 GLI4P10075 376 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 HIST1H1CP16403 213 aaKnown RBP4.2□□□□□ -1.74
SCAF11-212ENST00000549162 GRPRP30550 384 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 IDH2P48735 452 aaKnown RBP4.2□□□□□ -1.74
SCAF11-212ENST00000549162 CYP4F2P78329 520 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 GLO1Q04760 184 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 C1orf61Q13536 156 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 TRIP10Q15642 601 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 NCMAPQ5T1S8 102 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 ZNF660Q6AZW8 331 aaPredicted RBP4.2□□□□□ -1.74
SCAF11-212ENST00000549162 UNQ6126/PRO20091Q6UXV3 157 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 OR5AS1Q8N127 324 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 ZADH2Q8N4Q0 377 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 DUSP19Q8WTR2 217 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 AP3S1Q92572 193 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 INTS14Q96SY0 518 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 CENPHQ9H3R5 247 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 CDCP1Q9H5V8 836 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 BEX4Q9NWD9 120 aaPredicted RBP4.2□□□□□ -1.74
SCAF11-212ENST00000549162 TIMM10BQ9Y5J6 103 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 BSNQ9UPA5 3926 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 A0A1W2PRV1 198 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 LRP5LA4QPB2 252 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 DBX1A6NMT0 343 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 PRR23D1E9PI22 279 aaPredicted RBP4.2□□□□□ -1.74
SCAF11-212ENST00000549162 M0QYG6 137 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 PRR23D2P0DMB1 279 aaPredicted RBP4.2□□□□□ -1.74
SCAF11-212ENST00000549162 NCK1P16333 377 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 TCEA1P23193 301 aaKnown RBP4.2□□□□□ -1.74
SCAF11-212ENST00000549162 MAP2K3P46734 347 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 SMCPP49901 116 aaPredicted RBP4.2□□□□□ -1.74
SCAF11-212ENST00000549162 NPY4RP50391 375 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 ETV1P50549 477 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 RPL15P61313 204 aaKnown RBP4.2□□□□□ -1.74
SCAF11-212ENST00000549162 SIRPAP78324 504 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 SPHARQ15513 63 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 NKPD1Q17RQ9 610 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 TRIM16LQ309B1 348 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 C3P1Q6ZMU1 363 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 YRDCQ86U90 279 aaKnown RBP4.2□□□□□ -1.74
SCAF11-212ENST00000549162 MARCH3Q86UD3 253 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 RBM45Q8IUH3 476 aaKnown RBP4.2□□□□□ -1.74
SCAF11-212ENST00000549162 ZNF584Q8IVC4 421 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 TMEM229BQ8NBD8 167 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 UBE2FQ969M7 185 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 RNFT2Q96EX2 444 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 SDSLQ96GA7 329 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 SPXQ9BT56 116 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 C11orf54Q9H0W9 315 aaPredicted RBP4.2□□□□□ -1.74
SCAF11-212ENST00000549162 TMEM140Q9NV12 185 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 SOHLH2Q9NX45 425 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 TNFRSF10DQ9UBN6 386 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 MAU2Q9Y6X3 613 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 CPED1A4D0V7 1026 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 CCDC160A6NGH7 325 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 DHRS3O75911 302 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 MMP9P14780 707 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 MSX2P35548 267 aaPredicted RBP4.2□□□□□ -1.74
SCAF11-212ENST00000549162 ACVR1BP36896 505 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 MAT1AQ00266 395 aaKnown RBP4.2□□□□□ -1.74
SCAF11-212ENST00000549162 ZNF92Q03936 586 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 IL15RAQ13261 267 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 ACKR1Q16570 336 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 DHRS11Q6UWP2 260 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 UEVLDQ8IX04 471 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 RFLNBQ8N5W9 214 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 CLEC1AQ8NC01 280 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 TMEM116Q8NCL8 245 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 ZCCHC10Q8TBK6 192 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 RNASE6Q93091 150 aaKnown RBP4.2□□□□□ -1.74
SCAF11-212ENST00000549162 ABTB1Q969K4 478 aaPredicted RBP4.2□□□□□ -1.74
SCAF11-212ENST00000549162 RNF5Q99942 180 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 GPR83Q9NYM4 423 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 SLC5A6Q9Y289 635 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 DOCK10Q96BY6 2186 aa4.2□□□□□ -1.74
SCAF11-212ENST00000549162 PRRC2BQ5JSZ5 2229 aaKnown RBP4.19□□□□□ -1.74
SCAF11-212ENST00000549162 ZNF785A8K8V0 405 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 PRR32B1ATL7 298 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 ZNF879B4DU55 563 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 NDUFS8O00217 210 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 SOX15O60248 233 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 SLC25A12O75746 678 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 ARL6IP5O75915 188 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 RGS11O94810 467 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 CPSF4O95639 269 aaKnown RBP4.19□□□□□ -1.74
SCAF11-212ENST00000549162 NAPSAO96009 420 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 PRKACBP22694 351 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 DSCR9P59020 149 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 PMS2P3Q13401 168 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 EBI3Q14213 229 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 SPDYE7PQ495Y7 208 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 TMEM53Q6P2H8 277 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms