RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 FAM3AP98173 230 aa15.82■□□□□ 0.12
PRPF40B-206ENST00000547764 ROM1Q03395 351 aa15.82■□□□□ 0.12
PRPF40B-206ENST00000547764 ZSCAN26Q16670 478 aa15.82■□□□□ 0.12
PRPF40B-206ENST00000547764 DEGS2Q6QHC5 323 aa15.82■□□□□ 0.12
PRPF40B-206ENST00000547764 SLC35F2Q8IXU6 374 aa15.82■□□□□ 0.12
PRPF40B-206ENST00000547764 RFLNBQ8N5W9 214 aa15.82■□□□□ 0.12
PRPF40B-206ENST00000547764 OR56B2PQ8NGI1 322 aa15.82■□□□□ 0.12
PRPF40B-206ENST00000547764 TRUB1Q8WWH5 349 aaKnown RBP15.82■□□□□ 0.12
PRPF40B-206ENST00000547764 ASB17Q8WXJ9 295 aa15.82■□□□□ 0.12
PRPF40B-206ENST00000547764 C1orf159Q96HA4 380 aa15.82■□□□□ 0.12
PRPF40B-206ENST00000547764 REEP6Q96HR9 211 aa15.82■□□□□ 0.12
PRPF40B-206ENST00000547764 OR8B4Q96RC9 309 aa15.82■□□□□ 0.12
PRPF40B-206ENST00000547764 MBOAT4Q96T53 435 aa15.82■□□□□ 0.12
PRPF40B-206ENST00000547764 MROQ9BYG7 248 aa15.82■□□□□ 0.12
PRPF40B-206ENST00000547764 TTTY10Q9BZA0 68 aa15.82■□□□□ 0.12
PRPF40B-206ENST00000547764 OR10A2Q9H208 303 aa15.82■□□□□ 0.12
PRPF40B-206ENST00000547764 GCM1Q9NP62 436 aa15.82■□□□□ 0.12
PRPF40B-206ENST00000547764 IMPAD1Q9NX62 359 aa15.82■□□□□ 0.12
PRPF40B-206ENST00000547764 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.82■□□□□ 0.12
PRPF40B-206ENST00000547764 ABCA2Q9BZC7 2435 aa15.82■□□□□ 0.12
PRPF40B-206ENST00000547764 IGHV3-64DA0A0J9YX35 117 aa15.81■□□□□ 0.12
PRPF40B-206ENST00000547764 TGFAP01135 160 aa15.81■□□□□ 0.12
PRPF40B-206ENST00000547764 SBK2P0C263 348 aa15.81■□□□□ 0.12
PRPF40B-206ENST00000547764 CXCR4P61073 352 aa15.81■□□□□ 0.12
PRPF40B-206ENST00000547764 LMO4P61968 165 aa15.81■□□□□ 0.12
PRPF40B-206ENST00000547764 GFOD2Q3B7J2 385 aa15.81■□□□□ 0.12
PRPF40B-206ENST00000547764 ZNF679Q8IYX0 411 aa15.81■□□□□ 0.12
PRPF40B-206ENST00000547764 OR51G2Q8NGK0 314 aa15.81■□□□□ 0.12
PRPF40B-206ENST00000547764 POM121Q96HA1 1249 aa15.81■□□□□ 0.12
PRPF40B-206ENST00000547764 MNTQ99583 582 aa15.81■□□□□ 0.12
PRPF40B-206ENST00000547764 SLC22A4Q9H015 551 aa15.81■□□□□ 0.12
PRPF40B-206ENST00000547764 CLN6Q9NWW5 311 aa15.81■□□□□ 0.12
PRPF40B-206ENST00000547764 MRPL15Q9P015 296 aaKnown RBP15.81■□□□□ 0.12
PRPF40B-206ENST00000547764 hCG_38984A0A1B0GV85 526 aa15.8■□□□□ 0.12
PRPF40B-206ENST00000547764 ZNF254O75437 659 aa15.8■□□□□ 0.12
PRPF40B-206ENST00000547764 DDOSTP39656 456 aa15.8■□□□□ 0.12
PRPF40B-206ENST00000547764 MMP16P51512 607 aa15.8■□□□□ 0.12
PRPF40B-206ENST00000547764 CDH15P55291 814 aa15.8■□□□□ 0.12
PRPF40B-206ENST00000547764 MAB21L1Q13394 359 aa15.8■□□□□ 0.12
PRPF40B-206ENST00000547764 OR8G1Q15617 311 aa15.8■□□□□ 0.12
PRPF40B-206ENST00000547764 FAM166AQ6J272 317 aa15.8■□□□□ 0.12
PRPF40B-206ENST00000547764 ZNF322Q6U7Q0 402 aaPredicted RBP15.8■□□□□ 0.12
PRPF40B-206ENST00000547764 PEG10Q86TG7 708 aaKnown RBP15.8■□□□□ 0.12
PRPF40B-206ENST00000547764 LINC01356Q8N9X3 169 aa15.8■□□□□ 0.12
PRPF40B-206ENST00000547764 OR8B12Q8NGG6 310 aa15.8■□□□□ 0.12
PRPF40B-206ENST00000547764 ZNF420Q8TAQ5 688 aaPredicted RBP15.8■□□□□ 0.12
PRPF40B-206ENST00000547764 RGCCQ9H4X1 137 aa15.8■□□□□ 0.12
PRPF40B-206ENST00000547764 IKZF2Q9UKS7 526 aa15.8■□□□□ 0.12
PRPF40B-206ENST00000547764 NPTNQ9Y639 398 aa15.8■□□□□ 0.12
PRPF40B-206ENST00000547764 NAV3Q8IVL0 2385 aa15.8■□□□□ 0.12
PRPF40B-206ENST00000547764 TMEM269A0A1B0GVZ9 245 aa15.79■□□□□ 0.12
PRPF40B-206ENST00000547764 FAM157AC9JC47 383 aa15.79■□□□□ 0.12
PRPF40B-206ENST00000547764 ZNF670-ZNF695F2Z2N8 137 aa15.79■□□□□ 0.12
PRPF40B-206ENST00000547764 PHYHO14832 338 aa15.79■□□□□ 0.12
PRPF40B-206ENST00000547764 MAGEB4O15481 346 aaPredicted RBP15.79■□□□□ 0.12
PRPF40B-206ENST00000547764 GMDSO60547 372 aa15.79■□□□□ 0.12
PRPF40B-206ENST00000547764 LMX1BO60663 402 aa15.79■□□□□ 0.12
PRPF40B-206ENST00000547764 CRLF1O75462 422 aa15.79■□□□□ 0.12
PRPF40B-206ENST00000547764 APOL3O95236 402 aa15.79■□□□□ 0.12
PRPF40B-206ENST00000547764 CFL1P23528 166 aaKnown RBP15.79■□□□□ 0.12
PRPF40B-206ENST00000547764 DCTDP32321 178 aa15.79■□□□□ 0.12
PRPF40B-206ENST00000547764 CD200P41217 278 aa15.79■□□□□ 0.12
PRPF40B-206ENST00000547764 GSK3AP49840 483 aa15.79■□□□□ 0.12
PRPF40B-206ENST00000547764 SNRPGP62308 76 aaKnown RBP15.79■□□□□ 0.12
PRPF40B-206ENST00000547764 GABPB1Q06547 395 aaPredicted RBP15.79■□□□□ 0.12
PRPF40B-206ENST00000547764 TMED1Q13445 227 aa15.79■□□□□ 0.12
PRPF40B-206ENST00000547764 MOGAT3Q86VF5 341 aa15.79■□□□□ 0.12
PRPF40B-206ENST00000547764 DVL3Q92997 716 aaPredicted RBP15.79■□□□□ 0.12
PRPF40B-206ENST00000547764 RFKQ969G6 155 aa15.79■□□□□ 0.12
PRPF40B-206ENST00000547764 SIGLEC11Q96RL6 698 aa15.79■□□□□ 0.12
PRPF40B-206ENST00000547764 APOL4Q9BPW4 351 aa15.79■□□□□ 0.12
PRPF40B-206ENST00000547764 ADAT1Q9BUB4 502 aaKnown RBP15.79■□□□□ 0.12
PRPF40B-206ENST00000547764 FAM206AQ9NX38 181 aa15.79■□□□□ 0.12
PRPF40B-206ENST00000547764 NOP16Q9Y3C1 178 aaKnown RBP15.79■□□□□ 0.12
PRPF40B-206ENST00000547764 GMPPBQ9Y5P6 360 aa15.79■□□□□ 0.12
PRPF40B-206ENST00000547764 ISPDA4D126 451 aa15.78■□□□□ 0.12
PRPF40B-206ENST00000547764 ACOD1A6NK06 481 aa15.78■□□□□ 0.12
PRPF40B-206ENST00000547764 ANKRD30BLA7E2S9 258 aa15.78■□□□□ 0.12
PRPF40B-206ENST00000547764 TMEM178BH3BS89 294 aa15.78■□□□□ 0.12
PRPF40B-206ENST00000547764 ENTPD6O75354 484 aa15.78■□□□□ 0.12
PRPF40B-206ENST00000547764 IGHV2-70P01814 119 aa15.78■□□□□ 0.12
PRPF40B-206ENST00000547764 PMELP40967 661 aa15.78■□□□□ 0.12
PRPF40B-206ENST00000547764 GATA4P43694 442 aa15.78■□□□□ 0.12
PRPF40B-206ENST00000547764 RIDAP52758 137 aaKnown RBP15.78■□□□□ 0.12
PRPF40B-206ENST00000547764 POU4F2Q12837 409 aa15.78■□□□□ 0.12
PRPF40B-206ENST00000547764 SLC25A30Q5SVS4 291 aa15.78■□□□□ 0.12
PRPF40B-206ENST00000547764 CELF2-AS1Q8N7Q2 184 aa15.78■□□□□ 0.12
PRPF40B-206ENST00000547764 LYZL4Q96KX0 146 aa15.78■□□□□ 0.12
PRPF40B-206ENST00000547764 TBX5Q99593 518 aa15.78■□□□□ 0.12
PRPF40B-206ENST00000547764 ZNF665Q9H7R5 613 aa15.78■□□□□ 0.12
PRPF40B-206ENST00000547764 KCNS2Q9ULS6 477 aa15.78■□□□□ 0.12
PRPF40B-206ENST00000547764 B4DSR2 109 aa15.77■□□□□ 0.12
PRPF40B-206ENST00000547764 IFNL4K9M1U5 179 aa15.77■□□□□ 0.12
PRPF40B-206ENST00000547764 OR2T7P0C7T2 308 aa15.77■□□□□ 0.12
PRPF40B-206ENST00000547764 ANPEPP15144 967 aa15.77■□□□□ 0.12
PRPF40B-206ENST00000547764 ATP6V1E1P36543 226 aa15.77■□□□□ 0.12
PRPF40B-206ENST00000547764 EGR3Q06889 387 aa15.77■□□□□ 0.12
PRPF40B-206ENST00000547764 RCN1Q15293 331 aa15.77■□□□□ 0.12
PRPF40B-206ENST00000547764 OR8B8Q15620 311 aa15.77■□□□□ 0.12
PRPF40B-206ENST00000547764 OCLNQ16625 522 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms