RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 OR2W3Q7Z3T1 314 aa11.74□□□□□ -0.53
PTCH1-215ENST00000547672 FTMTQ8N4E7 242 aa11.74□□□□□ -0.53
PTCH1-215ENST00000547672 RBMXL3Q8N7X1 1067 aaKnown RBP11.74□□□□□ -0.53
PTCH1-215ENST00000547672 DNAAF1Q8NEP3 725 aa11.74□□□□□ -0.53
PTCH1-215ENST00000547672 OR51D1Q8NGF3 324 aa11.74□□□□□ -0.53
PTCH1-215ENST00000547672 OR1K1Q8NGR3 316 aa11.74□□□□□ -0.53
PTCH1-215ENST00000547672 AKR7LQ8NHP1 331 aa11.74□□□□□ -0.53
PTCH1-215ENST00000547672 ENKURQ8TC29 256 aa11.74□□□□□ -0.53
PTCH1-215ENST00000547672 HTRA1Q92743 480 aa11.74□□□□□ -0.53
PTCH1-215ENST00000547672 BCL2L2Q92843 193 aaPredicted RBP11.74□□□□□ -0.53
PTCH1-215ENST00000547672 APOBEC3DQ96AK3 386 aaPredicted RBP11.74□□□□□ -0.53
PTCH1-215ENST00000547672 SPSB1Q96BD6 273 aa11.74□□□□□ -0.53
PTCH1-215ENST00000547672 SGK3Q96BR1 496 aa11.74□□□□□ -0.53
PTCH1-215ENST00000547672 ADAT3Q96EY9 351 aaPredicted RBP11.74□□□□□ -0.53
PTCH1-215ENST00000547672 ZC3HAV1LQ96H79 300 aaKnown RBP11.74□□□□□ -0.53
PTCH1-215ENST00000547672 S100A13Q99584 98 aa11.74□□□□□ -0.53
PTCH1-215ENST00000547672 C1QTNF5Q9BXJ0 243 aa11.74□□□□□ -0.53
PTCH1-215ENST00000547672 OCEL1Q9H607 264 aa11.74□□□□□ -0.53
PTCH1-215ENST00000547672 C12orf49Q9H741 205 aa11.74□□□□□ -0.53
PTCH1-215ENST00000547672 PLSCR4Q9NRQ2 329 aa11.74□□□□□ -0.53
PTCH1-215ENST00000547672 COPZ2Q9P299 210 aa11.74□□□□□ -0.53
PTCH1-215ENST00000547672 TUBD1Q9UJT1 453 aa11.74□□□□□ -0.53
PTCH1-215ENST00000547672 CIB4A0PJX0 185 aa11.73□□□□□ -0.53
PTCH1-215ENST00000547672 NAP1L6A6NFF2 107 aa11.73□□□□□ -0.53
PTCH1-215ENST00000547672 H3BSH0 61 aa11.73□□□□□ -0.53
PTCH1-215ENST00000547672 SULT1C2O00338 296 aa11.73□□□□□ -0.53
PTCH1-215ENST00000547672 DNAJC13O75165 2243 aa11.73□□□□□ -0.53
PTCH1-215ENST00000547672 HCKP08631 526 aa11.73□□□□□ -0.53
PTCH1-215ENST00000547672 ITGA5P08648 1049 aa11.73□□□□□ -0.53
PTCH1-215ENST00000547672 PRF1P14222 555 aa11.73□□□□□ -0.53
PTCH1-215ENST00000547672 TUBG1P23258 451 aa11.73□□□□□ -0.53
PTCH1-215ENST00000547672 STOMP27105 288 aa11.73□□□□□ -0.53
PTCH1-215ENST00000547672 HOXC12P31275 282 aa11.73□□□□□ -0.53
PTCH1-215ENST00000547672 DYRK1AQ13627 763 aa11.73□□□□□ -0.53
PTCH1-215ENST00000547672 P2RY6Q15077 328 aa11.73□□□□□ -0.53
PTCH1-215ENST00000547672 CNN3Q15417 329 aaKnown RBP11.73□□□□□ -0.53
PTCH1-215ENST00000547672 SPEGQ15772 3267 aa11.73□□□□□ -0.53
PTCH1-215ENST00000547672 TBR1Q16650 682 aa11.73□□□□□ -0.53
PTCH1-215ENST00000547672 GSG1Q2KHT4 349 aa11.73□□□□□ -0.53
PTCH1-215ENST00000547672 GFOD2Q3B7J2 385 aa11.73□□□□□ -0.53
PTCH1-215ENST00000547672 PLEKHN1Q494U1 663 aaPredicted RBP11.73□□□□□ -0.53
PTCH1-215ENST00000547672 ACSF3Q4G176 576 aaPredicted RBP11.73□□□□□ -0.53
PTCH1-215ENST00000547672 ZNF585AQ6P3V2 769 aa11.73□□□□□ -0.53
PTCH1-215ENST00000547672 CCBE1Q6UXH8 406 aaPredicted RBP11.73□□□□□ -0.53
PTCH1-215ENST00000547672 GDPD3Q7L5L3 318 aa11.73□□□□□ -0.53
PTCH1-215ENST00000547672 SNX29P2Q8IUI4 249 aa11.73□□□□□ -0.53
PTCH1-215ENST00000547672 TOMM5Q8N4H5 51 aa11.73□□□□□ -0.53
PTCH1-215ENST00000547672 KCNG3Q8TAE7 436 aa11.73□□□□□ -0.53
PTCH1-215ENST00000547672 SMIM4Q8WVI0 70 aa11.73□□□□□ -0.53
PTCH1-215ENST00000547672 SLC25A28Q96A46 364 aa11.73□□□□□ -0.53
PTCH1-215ENST00000547672 ITPKCQ96DU7 683 aa11.73□□□□□ -0.53
PTCH1-215ENST00000547672 REEP6Q96HR9 211 aa11.73□□□□□ -0.53
PTCH1-215ENST00000547672 TAAR6Q96RI8 345 aa11.73□□□□□ -0.53
PTCH1-215ENST00000547672 GPER1Q99527 375 aa11.73□□□□□ -0.53
PTCH1-215ENST00000547672 NUDT16L1Q9BRJ7 211 aaKnown RBP11.73□□□□□ -0.53
PTCH1-215ENST00000547672 OBP2BQ9NPH6 170 aa11.73□□□□□ -0.53
PTCH1-215ENST00000547672 TUBG2Q9NRH3 451 aa11.73□□□□□ -0.53
PTCH1-215ENST00000547672 RBFOX1Q9NWB1 397 aaKnown RBP11.73□□□□□ -0.53
PTCH1-215ENST00000547672 EIF3KQ9UBQ5 218 aaKnown RBP11.73□□□□□ -0.53
PTCH1-215ENST00000547672 PIGLQ9Y2B2 252 aa11.73□□□□□ -0.53
PTCH1-215ENST00000547672 CEP250Q9BV73 2442 aa11.72□□□□□ -0.53
PTCH1-215ENST00000547672 NCOA6Q14686 2063 aaPredicted RBP11.72□□□□□ -0.53
PTCH1-215ENST00000547672 A0A0B4J203 849 aa11.72□□□□□ -0.53
PTCH1-215ENST00000547672 FAM240BA0A1B0GVZ2 78 aa11.72□□□□□ -0.53
PTCH1-215ENST00000547672 MBD3L4A6NDZ8 208 aaPredicted RBP11.72□□□□□ -0.53
PTCH1-215ENST00000547672 MBD3L3A6NE82 208 aaPredicted RBP11.72□□□□□ -0.53
PTCH1-215ENST00000547672 MBD3L5A6NJ08 208 aaPredicted RBP11.72□□□□□ -0.53
PTCH1-215ENST00000547672 LYRM1O43325 122 aa11.72□□□□□ -0.53
PTCH1-215ENST00000547672 IL2RAP01589 272 aa11.72□□□□□ -0.53
PTCH1-215ENST00000547672 CHRM2P08172 466 aa11.72□□□□□ -0.53
PTCH1-215ENST00000547672 SPINK2P20155 84 aa11.72□□□□□ -0.53
PTCH1-215ENST00000547672 FAUP35544 74 aaKnown RBP11.72□□□□□ -0.53
PTCH1-215ENST00000547672 BCAP31P51572 246 aa11.72□□□□□ -0.53
PTCH1-215ENST00000547672 CLDN12P56749 244 aa11.72□□□□□ -0.53
PTCH1-215ENST00000547672 GPR176Q14439 515 aa11.72□□□□□ -0.53
PTCH1-215ENST00000547672 ARL6IP1Q15041 203 aa11.72□□□□□ -0.53
PTCH1-215ENST00000547672 GUSBP1Q15486 140 aa11.72□□□□□ -0.53
PTCH1-215ENST00000547672 CLVS2Q5SYC1 327 aa11.72□□□□□ -0.53
PTCH1-215ENST00000547672 PLET1Q6UQ28 207 aa11.72□□□□□ -0.53
PTCH1-215ENST00000547672 TFAP2EQ6VUC0 442 aa11.72□□□□□ -0.53
PTCH1-215ENST00000547672 COLCA1Q6ZS62 124 aa11.72□□□□□ -0.53
PTCH1-215ENST00000547672 BEND4Q6ZU67 534 aa11.72□□□□□ -0.53
PTCH1-215ENST00000547672 CDH24Q86UP0 819 aa11.72□□□□□ -0.53
PTCH1-215ENST00000547672 C1orf174Q8IYL3 243 aa11.72□□□□□ -0.53
PTCH1-215ENST00000547672 C17orf78Q8N4C9 275 aa11.72□□□□□ -0.53
PTCH1-215ENST00000547672 DUSP18Q8NEJ0 188 aa11.72□□□□□ -0.53
PTCH1-215ENST00000547672 CSNK2A3Q8NEV1 391 aa11.72□□□□□ -0.53
PTCH1-215ENST00000547672 OR13C9Q8NGT0 318 aa11.72□□□□□ -0.53
PTCH1-215ENST00000547672 MBD3L2Q8NHZ7 208 aaPredicted RBP11.72□□□□□ -0.53
PTCH1-215ENST00000547672 FAM46BQ96A09 425 aa11.72□□□□□ -0.53
PTCH1-215ENST00000547672 SPSB4Q96A44 273 aa11.72□□□□□ -0.53
PTCH1-215ENST00000547672 SLC25A38Q96DW6 304 aa11.72□□□□□ -0.53
PTCH1-215ENST00000547672 ABHD17AQ96GS6 310 aa11.72□□□□□ -0.53
PTCH1-215ENST00000547672 ABHD1Q96SE0 405 aa11.72□□□□□ -0.53
PTCH1-215ENST00000547672 CHST5Q9GZS9 411 aa11.72□□□□□ -0.53
PTCH1-215ENST00000547672 ATG5Q9H1Y0 275 aa11.72□□□□□ -0.53
PTCH1-215ENST00000547672 SCPEP1Q9HB40 452 aa11.72□□□□□ -0.53
PTCH1-215ENST00000547672 ZNF319Q9P2F9 582 aa11.72□□□□□ -0.53
PTCH1-215ENST00000547672 TBC1D24Q9ULP9 559 aa11.72□□□□□ -0.53
PTCH1-215ENST00000547672 SLC7A11Q9UPY5 501 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms