RNA–Protein interactions for RNA: ENST00000547533.1

AC055716.3-201, humanhuman

TSL 3 BASIC

Gene AC055716.3, Length 761 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.3-201ENST00000547533 Q6ZSV7 163 aa7.54□□□□□ -1.2
AC055716.3-201ENST00000547533 HIST2H3AQ71DI3 136 aa7.54□□□□□ -1.2
AC055716.3-201ENST00000547533 CBLL1Q75N03 491 aa7.54□□□□□ -1.2
AC055716.3-201ENST00000547533 TSEN54Q7Z6J9 526 aaKnown RBP7.54□□□□□ -1.2
AC055716.3-201ENST00000547533 VTCN1Q7Z7D3 282 aa7.54□□□□□ -1.2
AC055716.3-201ENST00000547533 PDZD9Q8IXQ8 264 aa7.54□□□□□ -1.2
AC055716.3-201ENST00000547533 FTMTQ8N4E7 242 aa7.54□□□□□ -1.2
AC055716.3-201ENST00000547533 PPP1R14AQ96A00 147 aa7.54□□□□□ -1.2
AC055716.3-201ENST00000547533 ZNF799Q96GE5 643 aa7.54□□□□□ -1.2
AC055716.3-201ENST00000547533 HSH2DQ96JZ2 352 aa7.54□□□□□ -1.2
AC055716.3-201ENST00000547533 SP140LQ9H930 580 aa7.54□□□□□ -1.2
AC055716.3-201ENST00000547533 SRA1Q9HD15 236 aaKnown RBP7.54□□□□□ -1.2
AC055716.3-201ENST00000547533 KAAG1Q9UBP8 84 aa7.54□□□□□ -1.2
AC055716.3-201ENST00000547533 RPUSD1Q9UJJ7 312 aaKnown RBP7.54□□□□□ -1.2
AC055716.3-201ENST00000547533 B9D1Q9UPM9 204 aa7.54□□□□□ -1.2
AC055716.3-201ENST00000547533 SIGLEC7Q9Y286 467 aa7.54□□□□□ -1.2
AC055716.3-201ENST00000547533 ZNF816-ZNF321PA0A0X1KG74 233 aa7.53□□□□□ -1.2
AC055716.3-201ENST00000547533 LOC100653049A0A140TA62 436 aa7.53□□□□□ -1.2
AC055716.3-201ENST00000547533 NKX6-3A6NJ46 265 aa7.53□□□□□ -1.2
AC055716.3-201ENST00000547533 PLXNB1O43157 2135 aa7.53□□□□□ -1.2
AC055716.3-201ENST00000547533 XRCC2O43543 280 aa7.53□□□□□ -1.2
AC055716.3-201ENST00000547533 IDH3BO43837 385 aa7.53□□□□□ -1.2
AC055716.3-201ENST00000547533 OR10H3O60404 316 aa7.53□□□□□ -1.2
AC055716.3-201ENST00000547533 TSPAN9O75954 239 aa7.53□□□□□ -1.2
AC055716.3-201ENST00000547533 KRT34O76011 436 aa7.53□□□□□ -1.2
AC055716.3-201ENST00000547533 SERPINA1P01009 418 aa7.53□□□□□ -1.2
AC055716.3-201ENST00000547533 FUT4P22083 530 aa7.53□□□□□ -1.2
AC055716.3-201ENST00000547533 PAICSP22234 425 aaKnown RBP7.53□□□□□ -1.2
AC055716.3-201ENST00000547533 DDOSTP39656 456 aa7.53□□□□□ -1.2
AC055716.3-201ENST00000547533 EGR3Q06889 387 aa7.53□□□□□ -1.2
AC055716.3-201ENST00000547533 KLF10Q13118 480 aa7.53□□□□□ -1.2
AC055716.3-201ENST00000547533 HERPUD1Q15011 391 aa7.53□□□□□ -1.2
AC055716.3-201ENST00000547533 OTPQ5XKR4 325 aa7.53□□□□□ -1.2
AC055716.3-201ENST00000547533 NCR3LG1Q68D85 454 aa7.53□□□□□ -1.2
AC055716.3-201ENST00000547533 SLC18B1Q6NT16 456 aa7.53□□□□□ -1.2
AC055716.3-201ENST00000547533 PGBD2Q6P3X8 592 aa7.53□□□□□ -1.2
AC055716.3-201ENST00000547533 DRAM2Q6UX65 266 aa7.53□□□□□ -1.2
AC055716.3-201ENST00000547533 PTCHD4Q6ZW05 846 aa7.53□□□□□ -1.2
AC055716.3-201ENST00000547533 LINC00346Q8IVM7 164 aa7.53□□□□□ -1.2
AC055716.3-201ENST00000547533 OR4S1Q8NGB4 309 aa7.53□□□□□ -1.2
AC055716.3-201ENST00000547533 OR4C13Q8NGP0 309 aa7.53□□□□□ -1.2
AC055716.3-201ENST00000547533 OR2T6Q8NHC8 308 aa7.53□□□□□ -1.2
AC055716.3-201ENST00000547533 FANK1Q8TC84 345 aa7.53□□□□□ -1.2
AC055716.3-201ENST00000547533 SLC7A13Q8TCU3 470 aa7.53□□□□□ -1.2
AC055716.3-201ENST00000547533 COPS4Q9BT78 406 aa7.53□□□□□ -1.2
AC055716.3-201ENST00000547533 IFT27Q9BW83 186 aa7.53□□□□□ -1.2
AC055716.3-201ENST00000547533 RASSF4Q9H2L5 321 aa7.53□□□□□ -1.2
AC055716.3-201ENST00000547533 RNPEPL1Q9HAU8 725 aa7.53□□□□□ -1.2
AC055716.3-201ENST00000547533 RPRD1BQ9NQG5 326 aaKnown RBP7.53□□□□□ -1.2
AC055716.3-201ENST00000547533 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.53□□□□□ -1.2
AC055716.3-201ENST00000547533 ZNRD1Q9P1U0 126 aa7.53□□□□□ -1.2
AC055716.3-201ENST00000547533 CTSZQ9UBR2 303 aa7.53□□□□□ -1.2
AC055716.3-201ENST00000547533 SNX13Q9Y5W8 968 aa7.53□□□□□ -1.2
AC055716.3-201ENST00000547533 CAPN7Q9Y6W3 813 aa7.53□□□□□ -1.2
AC055716.3-201ENST00000547533 ENPP4Q9Y6X5 453 aa7.53□□□□□ -1.2
AC055716.3-201ENST00000547533 MEIOCA2RUB1 952 aa7.52□□□□□ -1.21
AC055716.3-201ENST00000547533 RNASEK-C17orf49H0YIS7 233 aa7.52□□□□□ -1.21
AC055716.3-201ENST00000547533 FFAR1O14842 300 aa7.52□□□□□ -1.21
AC055716.3-201ENST00000547533 NPFFO15130 113 aa7.52□□□□□ -1.21
AC055716.3-201ENST00000547533 ARPC3O15145 178 aa7.52□□□□□ -1.21
AC055716.3-201ENST00000547533 SLC22A2O15244 555 aa7.52□□□□□ -1.21
AC055716.3-201ENST00000547533 XPNPEP2O43895 674 aa7.52□□□□□ -1.21
AC055716.3-201ENST00000547533 PTP4A3O75365 173 aa7.52□□□□□ -1.21
AC055716.3-201ENST00000547533 PPP1R3DO95685 299 aa7.52□□□□□ -1.21
AC055716.3-201ENST00000547533 PTBP3O95758 552 aaKnown RBP7.52□□□□□ -1.21
AC055716.3-201ENST00000547533 APOC1P02654 83 aa7.52□□□□□ -1.21
AC055716.3-201ENST00000547533 RHCEP18577 417 aa7.52□□□□□ -1.21
AC055716.3-201ENST00000547533 CFL1P23528 166 aaKnown RBP7.52□□□□□ -1.21
AC055716.3-201ENST00000547533 GNALP38405 381 aa7.52□□□□□ -1.21
AC055716.3-201ENST00000547533 CDKN2AP42771 156 aaKnown RBP7.52□□□□□ -1.21
AC055716.3-201ENST00000547533 SLC15A1P46059 708 aa7.52□□□□□ -1.21
AC055716.3-201ENST00000547533 LIPEQ05469 1076 aa7.52□□□□□ -1.21
AC055716.3-201ENST00000547533 ACSM1Q08AH1 577 aa7.52□□□□□ -1.21
AC055716.3-201ENST00000547533 FAM189A2Q15884 450 aa7.52□□□□□ -1.21
AC055716.3-201ENST00000547533 RFX4Q33E94 735 aa7.52□□□□□ -1.21
AC055716.3-201ENST00000547533 TEX36Q5VZQ5 186 aa7.52□□□□□ -1.21
AC055716.3-201ENST00000547533 CFAP77Q6ZQR2 320 aa7.52□□□□□ -1.21
AC055716.3-201ENST00000547533 DPY19L4Q7Z388 723 aa7.52□□□□□ -1.21
AC055716.3-201ENST00000547533 LNX2Q8N448 690 aa7.52□□□□□ -1.21
AC055716.3-201ENST00000547533 PROKR2Q8NFJ6 384 aa7.52□□□□□ -1.21
AC055716.3-201ENST00000547533 SLC26A10Q8NG04 563 aa7.52□□□□□ -1.21
AC055716.3-201ENST00000547533 H1FXQ92522 213 aaKnown RBP7.52□□□□□ -1.21
AC055716.3-201ENST00000547533 C12orf43Q96C57 262 aaKnown RBP7.52□□□□□ -1.21
AC055716.3-201ENST00000547533 CLPTM1LQ96KA5 538 aa7.52□□□□□ -1.21
AC055716.3-201ENST00000547533 TSSK2Q96PF2 358 aa7.52□□□□□ -1.21
AC055716.3-201ENST00000547533 NMNAT3Q96T66 252 aa7.52□□□□□ -1.21
AC055716.3-201ENST00000547533 HOPXQ9BPY8 73 aaPredicted RBP7.52□□□□□ -1.21
AC055716.3-201ENST00000547533 PPA2Q9H2U2 334 aa7.52□□□□□ -1.21
AC055716.3-201ENST00000547533 SMURF1Q9HCE7 757 aa7.52□□□□□ -1.21
AC055716.3-201ENST00000547533 DNAJB11Q9UBS4 358 aa7.52□□□□□ -1.21
AC055716.3-201ENST00000547533 FBLN5Q9UBX5 448 aa7.52□□□□□ -1.21
AC055716.3-201ENST00000547533 CYB5R1Q9UHQ9 305 aa7.52□□□□□ -1.21
AC055716.3-201ENST00000547533 SAMD4AQ9UPU9 718 aaKnown RBP7.52□□□□□ -1.21
AC055716.3-201ENST00000547533 IGLV1-36A0A0B4J1U3 117 aa7.51□□□□□ -1.21
AC055716.3-201ENST00000547533 A0A1W2PPH5 198 aa7.51□□□□□ -1.21
AC055716.3-201ENST00000547533 A0A1W2PQ09 198 aa7.51□□□□□ -1.21
AC055716.3-201ENST00000547533 ANXA2P2A6NMY6 339 aa7.51□□□□□ -1.21
AC055716.3-201ENST00000547533 PEX14O75381 377 aa7.51□□□□□ -1.21
AC055716.3-201ENST00000547533 OPN1MWP04001 364 aa7.51□□□□□ -1.21
AC055716.3-201ENST00000547533 OPN1MW2P0DN77 364 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms