RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 ZNF92Q03936 586 aa7.83□□□□□ -1.16
YBX3-218ENST00000546298 HNRNPA0Q13151 305 aaKnown RBP7.83□□□□□ -1.16
YBX3-218ENST00000546298 EIF2B1Q14232 305 aaKnown RBP7.83□□□□□ -1.16
YBX3-218ENST00000546298 SNCBQ16143 134 aa7.83□□□□□ -1.16
YBX3-218ENST00000546298 SNAI3Q3KNW1 292 aa7.83□□□□□ -1.16
YBX3-218ENST00000546298 GLYATL3Q5SZD4 288 aa7.83□□□□□ -1.16
YBX3-218ENST00000546298 CD276Q5ZPR3 534 aa7.83□□□□□ -1.16
YBX3-218ENST00000546298 RHOUQ7L0Q8 258 aa7.83□□□□□ -1.16
YBX3-218ENST00000546298 AQP12AQ8IXF9 295 aa7.83□□□□□ -1.16
YBX3-218ENST00000546298 SIGLECL1Q8N7X8 197 aa7.83□□□□□ -1.16
YBX3-218ENST00000546298 ZDHHC22Q8N966 263 aa7.83□□□□□ -1.16
YBX3-218ENST00000546298 OR52H1Q8NGJ2 320 aa7.83□□□□□ -1.16
YBX3-218ENST00000546298 OR4Q3Q8NH05 313 aa7.83□□□□□ -1.16
YBX3-218ENST00000546298 OR2AE1Q8NHA4 323 aa7.83□□□□□ -1.16
YBX3-218ENST00000546298 ZNRF4Q8WWF5 429 aa7.83□□□□□ -1.16
YBX3-218ENST00000546298 INTS14Q96SY0 518 aa7.83□□□□□ -1.16
YBX3-218ENST00000546298 ADAT1Q9BUB4 502 aaKnown RBP7.83□□□□□ -1.16
YBX3-218ENST00000546298 TEX12Q9BXU0 123 aa7.83□□□□□ -1.16
YBX3-218ENST00000546298 ZNF556Q9HAH1 456 aa7.83□□□□□ -1.16
YBX3-218ENST00000546298 ARMC1Q9NVT9 282 aa7.83□□□□□ -1.16
YBX3-218ENST00000546298 KIF17Q9P2E2 1029 aa7.83□□□□□ -1.16
YBX3-218ENST00000546298 ZNF69Q9UC07 566 aa7.83□□□□□ -1.16
YBX3-218ENST00000546298 N6AMT1Q9Y5N5 214 aa7.83□□□□□ -1.16
YBX3-218ENST00000546298 TRAV38-1A0A0B4J264 116 aa7.82□□□□□ -1.16
YBX3-218ENST00000546298 DHRS12A0PJE2 317 aa7.82□□□□□ -1.16
YBX3-218ENST00000546298 A6NLC8 198 aa7.82□□□□□ -1.16
YBX3-218ENST00000546298 TBX1O43435 398 aa7.82□□□□□ -1.16
YBX3-218ENST00000546298 ENSAO43768 121 aaKnown RBP7.82□□□□□ -1.16
YBX3-218ENST00000546298 HMGN1P05114 100 aa7.82□□□□□ -1.16
YBX3-218ENST00000546298 GYPBP06028 91 aa7.82□□□□□ -1.16
YBX3-218ENST00000546298 LIPFP07098 398 aa7.82□□□□□ -1.16
YBX3-218ENST00000546298 T-ENOLP0DO92 83 aa7.82□□□□□ -1.16
YBX3-218ENST00000546298 SLC2A1P11166 492 aa7.82□□□□□ -1.16
YBX3-218ENST00000546298 PRTN3P24158 256 aa7.82□□□□□ -1.16
YBX3-218ENST00000546298 HSD11B1P28845 292 aa7.82□□□□□ -1.16
YBX3-218ENST00000546298 GSTT1P30711 240 aa7.82□□□□□ -1.16
YBX3-218ENST00000546298 PRSS12P56730 875 aa7.82□□□□□ -1.16
YBX3-218ENST00000546298 BPIFB3P59826 476 aa7.82□□□□□ -1.16
YBX3-218ENST00000546298 PAX2Q02962 417 aa7.82□□□□□ -1.16
YBX3-218ENST00000546298 FOXL1Q12952 345 aa7.82□□□□□ -1.16
YBX3-218ENST00000546298 BAMBIQ13145 260 aa7.82□□□□□ -1.16
YBX3-218ENST00000546298 OR8B8Q15620 311 aa7.82□□□□□ -1.16
YBX3-218ENST00000546298 MPPED2Q15777 294 aa7.82□□□□□ -1.16
YBX3-218ENST00000546298 TIGD6Q17RP2 521 aa7.82□□□□□ -1.16
YBX3-218ENST00000546298 TUSC1Q2TAM9 212 aa7.82□□□□□ -1.16
YBX3-218ENST00000546298 C11orf91Q3C1V1 193 aa7.82□□□□□ -1.16
YBX3-218ENST00000546298 KLF17Q5JT82 389 aaPredicted RBP7.82□□□□□ -1.16
YBX3-218ENST00000546298 FAM201AQ5SY85 155 aa7.82□□□□□ -1.16
YBX3-218ENST00000546298 LINC01590Q5TEZ4 76 aa7.82□□□□□ -1.16
YBX3-218ENST00000546298 PRAMEF6Q5VXH4 476 aa7.82□□□□□ -1.16
YBX3-218ENST00000546298 WDR25Q64LD2 544 aaPredicted RBP7.82□□□□□ -1.16
YBX3-218ENST00000546298 LYPD4Q6UWN0 246 aa7.82□□□□□ -1.16
YBX3-218ENST00000546298 SPATC1Q76KD6 591 aa7.82□□□□□ -1.16
YBX3-218ENST00000546298 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.82□□□□□ -1.16
YBX3-218ENST00000546298 ERI1Q8IV48 349 aaKnown RBP7.82□□□□□ -1.16
YBX3-218ENST00000546298 PARP8Q8N3A8 854 aa7.82□□□□□ -1.16
YBX3-218ENST00000546298 FTMTQ8N4E7 242 aa7.82□□□□□ -1.16
YBX3-218ENST00000546298 BOLLQ8N9W6 283 aaKnown RBP7.82□□□□□ -1.16
YBX3-218ENST00000546298 OR56B2PQ8NGI1 322 aa7.82□□□□□ -1.16
YBX3-218ENST00000546298 OR6N2Q8NGY6 317 aa7.82□□□□□ -1.16
YBX3-218ENST00000546298 OR8S1Q8NH09 359 aa7.82□□□□□ -1.16
YBX3-218ENST00000546298 SPSB4Q96A44 273 aa7.82□□□□□ -1.16
YBX3-218ENST00000546298 OTULINQ96BN8 352 aa7.82□□□□□ -1.16
YBX3-218ENST00000546298 UPRTQ96BW1 309 aa7.82□□□□□ -1.16
YBX3-218ENST00000546298 CCDC124Q96CT7 223 aaKnown RBP7.82□□□□□ -1.16
YBX3-218ENST00000546298 FEVQ99581 238 aa7.82□□□□□ -1.16
YBX3-218ENST00000546298 NUDT16L1Q9BRJ7 211 aaKnown RBP7.82□□□□□ -1.16
YBX3-218ENST00000546298 THTPAQ9BU02 230 aa7.82□□□□□ -1.16
YBX3-218ENST00000546298 MMADHCQ9H3L0 296 aaPredicted RBP7.82□□□□□ -1.16
YBX3-218ENST00000546298 RGCCQ9H4X1 137 aa7.82□□□□□ -1.16
YBX3-218ENST00000546298 YY1AP1Q9H869 796 aa7.82□□□□□ -1.16
YBX3-218ENST00000546298 VNN3Q9NY84 501 aa7.82□□□□□ -1.16
YBX3-218ENST00000546298 TAS2R1Q9NYW7 299 aa7.82□□□□□ -1.16
YBX3-218ENST00000546298 FBN3Q75N90 2809 aa7.82□□□□□ -1.16
YBX3-218ENST00000546298 hCG_1807616A0A1W2PRN6 198 aa7.81□□□□□ -1.16
YBX3-218ENST00000546298 PRR23D1E9PI22 279 aaPredicted RBP7.81□□□□□ -1.16
YBX3-218ENST00000546298 CLDN34H7C241 214 aa7.81□□□□□ -1.16
YBX3-218ENST00000546298 ACOT8O14734 319 aa7.81□□□□□ -1.16
YBX3-218ENST00000546298 E2F6O75461 281 aa7.81□□□□□ -1.16
YBX3-218ENST00000546298 GLCEO94923 617 aa7.81□□□□□ -1.16
YBX3-218ENST00000546298 ANXA2P07355 339 aaKnown RBP7.81□□□□□ -1.16
YBX3-218ENST00000546298 GRPP07492 148 aa7.81□□□□□ -1.16
YBX3-218ENST00000546298 PRR23D2P0DMB1 279 aaPredicted RBP7.81□□□□□ -1.16
YBX3-218ENST00000546298 CLUP10909 449 aa7.81□□□□□ -1.16
YBX3-218ENST00000546298 ANXA8P13928 327 aa7.81□□□□□ -1.16
YBX3-218ENST00000546298 POU1F1P28069 291 aa7.81□□□□□ -1.16
YBX3-218ENST00000546298 GNALP38405 381 aa7.81□□□□□ -1.16
YBX3-218ENST00000546298 PSMB10P40306 273 aa7.81□□□□□ -1.16
YBX3-218ENST00000546298 CX3CR1P49238 355 aa7.81□□□□□ -1.16
YBX3-218ENST00000546298 DNAL1Q4LDG9 190 aa7.81□□□□□ -1.16
YBX3-218ENST00000546298 LYPD2Q6UXB3 125 aa7.81□□□□□ -1.16
YBX3-218ENST00000546298 C9orf139Q6ZV77 190 aa7.81□□□□□ -1.16
YBX3-218ENST00000546298 DPY19L4Q7Z388 723 aa7.81□□□□□ -1.16
YBX3-218ENST00000546298 ADGRG5Q8IZF4 528 aa7.81□□□□□ -1.16
YBX3-218ENST00000546298 ZNF454Q8N9F8 522 aa7.81□□□□□ -1.16
YBX3-218ENST00000546298 CSNK2A3Q8NEV1 391 aa7.81□□□□□ -1.16
YBX3-218ENST00000546298 SGMS2Q8NHU3 365 aa7.81□□□□□ -1.16
YBX3-218ENST00000546298 RNF133Q8WVZ7 376 aa7.81□□□□□ -1.16
YBX3-218ENST00000546298 SLC25A28Q96A46 364 aa7.81□□□□□ -1.16
YBX3-218ENST00000546298 NIPSNAP1Q9BPW8 284 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms