RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 TMEM14DPA8MWL7 114 aa14□□□□□ -0.17
LDLR-204ENST00000545707 ZNF208O43345 1280 aa14□□□□□ -0.17
LDLR-204ENST00000545707 RAD51DO75771 328 aa14□□□□□ -0.17
LDLR-204ENST00000545707 HEXBP07686 556 aa14□□□□□ -0.17
LDLR-204ENST00000545707 GIMD1P0DJR0 217 aa14□□□□□ -0.17
LDLR-204ENST00000545707 CLRN1P58418 232 aa14□□□□□ -0.17
LDLR-204ENST00000545707 SLC9A3R2Q15599 337 aa14□□□□□ -0.17
LDLR-204ENST00000545707 PAN3Q58A45 887 aaKnown RBP14□□□□□ -0.17
LDLR-204ENST00000545707 NFAM1Q8NET5 270 aaPredicted RBP14□□□□□ -0.17
LDLR-204ENST00000545707 OR5D18Q8NGL1 313 aa14□□□□□ -0.17
LDLR-204ENST00000545707 NPRL2Q8WTW4 380 aa14□□□□□ -0.17
LDLR-204ENST00000545707 MRPL13Q9BYD1 178 aaKnown RBP14□□□□□ -0.17
LDLR-204ENST00000545707 MRPS28Q9Y2Q9 187 aaKnown RBP14□□□□□ -0.17
LDLR-204ENST00000545707 ADAP1O75689 374 aa13.99□□□□□ -0.17
LDLR-204ENST00000545707 TMEM50BP56557 158 aa13.99□□□□□ -0.17
LDLR-204ENST00000545707 RSPO4Q2I0M5 234 aaPredicted RBP13.99□□□□□ -0.17
LDLR-204ENST00000545707 MISPQ8IVT2 679 aa13.99□□□□□ -0.17
LDLR-204ENST00000545707 OR5AS1Q8N127 324 aa13.99□□□□□ -0.17
LDLR-204ENST00000545707 OR10G3Q8NGC4 313 aa13.99□□□□□ -0.17
LDLR-204ENST00000545707 OR8B12Q8NGG6 310 aa13.99□□□□□ -0.17
LDLR-204ENST00000545707 POC1BQ8TC44 478 aa13.99□□□□□ -0.17
LDLR-204ENST00000545707 MAFIPQ8WZ33 124 aa13.99□□□□□ -0.17
LDLR-204ENST00000545707 DCUN1D4Q92564 292 aa13.99□□□□□ -0.17
LDLR-204ENST00000545707 FAM117AQ9C073 453 aa13.99□□□□□ -0.17
LDLR-204ENST00000545707 CHMP1AQ9HD42 196 aaPredicted RBP13.99□□□□□ -0.17
LDLR-204ENST00000545707 GPR84Q9NQS5 396 aa13.99□□□□□ -0.17
LDLR-204ENST00000545707 RPH3AQ9Y2J0 694 aaPredicted RBP13.99□□□□□ -0.17
LDLR-204ENST00000545707 E9PLN8 166 aa13.99□□□□□ -0.17
LDLR-204ENST00000545707 GLULP15104 373 aa13.99□□□□□ -0.17
LDLR-204ENST00000545707 ZNF17P17021 662 aa13.99□□□□□ -0.17
LDLR-204ENST00000545707 HLA-GP17693 338 aa13.99□□□□□ -0.17
LDLR-204ENST00000545707 SFTPDP35247 375 aa13.99□□□□□ -0.17
LDLR-204ENST00000545707 ZNF121P58317 390 aaPredicted RBP13.99□□□□□ -0.17
LDLR-204ENST00000545707 NAA40Q86UY6 237 aa13.99□□□□□ -0.17
LDLR-204ENST00000545707 RRNAD1Q96FB5 475 aaKnown RBP13.99□□□□□ -0.17
LDLR-204ENST00000545707 UQCC2Q9BRT2 126 aa13.99□□□□□ -0.17
LDLR-204ENST00000545707 PPP4R1LQ9P1A2 415 aa13.99□□□□□ -0.17
LDLR-204ENST00000545707 B3GALT5Q9Y2C3 310 aa13.99□□□□□ -0.17
LDLR-204ENST00000545707 A0A0B4J2A0 478 aa13.98□□□□□ -0.17
LDLR-204ENST00000545707 H0YIZ8 118 aa13.98□□□□□ -0.17
LDLR-204ENST00000545707 DUS4LO95620 317 aaKnown RBP13.98□□□□□ -0.17
LDLR-204ENST00000545707 CRHP06850 196 aa13.98□□□□□ -0.17
LDLR-204ENST00000545707 PSMB6P28072 239 aa13.98□□□□□ -0.17
LDLR-204ENST00000545707 UEVLDQ8IX04 471 aa13.98□□□□□ -0.17
LDLR-204ENST00000545707 OR5AP2Q8NGF4 316 aa13.98□□□□□ -0.17
LDLR-204ENST00000545707 RAB3CQ96E17 227 aa13.98□□□□□ -0.17
LDLR-204ENST00000545707 C1orf147Q96MC9 270 aaPredicted RBP13.98□□□□□ -0.17
LDLR-204ENST00000545707 OR5B2Q96R09 309 aa13.98□□□□□ -0.17
LDLR-204ENST00000545707 ADAT1Q9BUB4 502 aaKnown RBP13.98□□□□□ -0.17
LDLR-204ENST00000545707 ALKBH4Q9NXW9 302 aa13.98□□□□□ -0.17
LDLR-204ENST00000545707 SHPKQ9UHJ6 478 aa13.98□□□□□ -0.17
LDLR-204ENST00000545707 SDCBPO00560 298 aaPredicted RBP13.98□□□□□ -0.17
LDLR-204ENST00000545707 HCKP08631 526 aa13.98□□□□□ -0.17
LDLR-204ENST00000545707 ZNF41P51814 821 aaPredicted RBP13.98□□□□□ -0.17
LDLR-204ENST00000545707 ZNF529Q6P280 563 aa13.98□□□□□ -0.17
LDLR-204ENST00000545707 FAM57BQ71RH2 274 aa13.98□□□□□ -0.17
LDLR-204ENST00000545707 HOGA1Q86XE5 327 aa13.98□□□□□ -0.17
LDLR-204ENST00000545707 OR2AJ1Q8NGZ0 328 aa13.98□□□□□ -0.17
LDLR-204ENST00000545707 ELP5Q8TE02 316 aa13.98□□□□□ -0.17
LDLR-204ENST00000545707 PAQR8Q8TEZ7 354 aa13.98□□□□□ -0.17
LDLR-204ENST00000545707 ARHGAP5-AS1Q96IT6 56 aa13.98□□□□□ -0.17
LDLR-204ENST00000545707 ARPC5LQ9BPX5 153 aa13.98□□□□□ -0.17
LDLR-204ENST00000545707 RNF126Q9BV68 326 aa13.98□□□□□ -0.17
LDLR-204ENST00000545707 DNTTIP1Q9H147 329 aa13.98□□□□□ -0.17
LDLR-204ENST00000545707 C5orf66Q9H5L9 145 aa13.98□□□□□ -0.17
LDLR-204ENST00000545707 CRTAPO75718 401 aaPredicted RBP13.97□□□□□ -0.17
LDLR-204ENST00000545707 OR2J2O76002 312 aa13.97□□□□□ -0.17
LDLR-204ENST00000545707 HTR3BO95264 441 aa13.97□□□□□ -0.17
LDLR-204ENST00000545707 PGA4P0DJD7 388 aa13.97□□□□□ -0.17
LDLR-204ENST00000545707 PGA3P0DJD8 388 aa13.97□□□□□ -0.17
LDLR-204ENST00000545707 GLB1P16278 677 aa13.97□□□□□ -0.17
LDLR-204ENST00000545707 MPZP25189 248 aa13.97□□□□□ -0.17
LDLR-204ENST00000545707 SRSF3P84103 164 aaKnown RBP13.97□□□□□ -0.17
LDLR-204ENST00000545707 SMAD4Q13485 552 aaKnown RBP13.97□□□□□ -0.17
LDLR-204ENST00000545707 DTWD2Q8NBA8 298 aa13.97□□□□□ -0.17
LDLR-204ENST00000545707 OR4K17Q8NGC6 315 aa13.97□□□□□ -0.17
LDLR-204ENST00000545707 TERB2Q8NHR7 220 aa13.97□□□□□ -0.17
LDLR-204ENST00000545707 TMEM230Q96A57 120 aa13.97□□□□□ -0.17
LDLR-204ENST00000545707 GPER1Q99527 375 aa13.97□□□□□ -0.17
LDLR-204ENST00000545707 A0A1B0GW55 424 aa13.96□□□□□ -0.17
LDLR-204ENST00000545707 MSGN1A6NI15 193 aa13.96□□□□□ -0.17
LDLR-204ENST00000545707 GPR31O00270 319 aa13.96□□□□□ -0.17
LDLR-204ENST00000545707 CDC14BO60729 498 aa13.96□□□□□ -0.17
LDLR-204ENST00000545707 DUX4L2P0CJ85 424 aa13.96□□□□□ -0.17
LDLR-204ENST00000545707 DUX4L3P0CJ86 424 aa13.96□□□□□ -0.17
LDLR-204ENST00000545707 DUX4L4P0CJ87 422 aa13.96□□□□□ -0.17
LDLR-204ENST00000545707 DUX4L5P0CJ88 424 aa13.96□□□□□ -0.17
LDLR-204ENST00000545707 DUX4L6P0CJ89 424 aa13.96□□□□□ -0.17
LDLR-204ENST00000545707 DUX4L7P0CJ90 424 aa13.96□□□□□ -0.17
LDLR-204ENST00000545707 PLPPR5Q32ZL2 321 aa13.96□□□□□ -0.17
LDLR-204ENST00000545707 THEM4Q5T1C6 240 aa13.96□□□□□ -0.17
LDLR-204ENST00000545707 ZNF574Q6ZN55 896 aaPredicted RBP13.96□□□□□ -0.17
LDLR-204ENST00000545707 C1QL2Q7Z5L3 287 aa13.96□□□□□ -0.17
LDLR-204ENST00000545707 TMEM200AQ86VY9 491 aa13.96□□□□□ -0.17
LDLR-204ENST00000545707 TMEM17Q86X19 198 aa13.96□□□□□ -0.17
LDLR-204ENST00000545707 OR6S1Q8NH40 331 aa13.96□□□□□ -0.17
LDLR-204ENST00000545707 MARC2Q969Z3 335 aa13.96□□□□□ -0.17
LDLR-204ENST00000545707 LIN37Q96GY3 246 aaPredicted RBP13.96□□□□□ -0.17
LDLR-204ENST00000545707 AIFM2Q9BRQ8 373 aa13.96□□□□□ -0.17
LDLR-204ENST00000545707 ST6GALNAC5Q9BVH7 336 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms