RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 IER2Q9BTL4 223 aa11.28□□□□□ -0.6
COL4A6-209ENST00000545689 PPP1R14DQ9NXH3 145 aa11.28□□□□□ -0.6
COL4A6-209ENST00000545689 ETFBKMTQ8IXQ9 262 aa11.28□□□□□ -0.6
COL4A6-209ENST00000545689 ST8SIA2Q92186 375 aa11.28□□□□□ -0.6
COL4A6-209ENST00000545689 DUSP13Q9UII6 198 aa11.28□□□□□ -0.6
COL4A6-209ENST00000545689 SCN9AQ15858 1988 aa11.28□□□□□ -0.6
COL4A6-209ENST00000545689 MEIKINA0A087WXM9 373 aa11.28□□□□□ -0.6
COL4A6-209ENST00000545689 CCL11P51671 97 aa11.28□□□□□ -0.6
COL4A6-209ENST00000545689 TMEM215Q68D42 235 aa11.28□□□□□ -0.6
COL4A6-209ENST00000545689 ANGPTL6Q8NI99 470 aa11.28□□□□□ -0.6
COL4A6-209ENST00000545689 LANCL2Q9NS86 450 aa11.28□□□□□ -0.6
COL4A6-209ENST00000545689 K7EQM0 130 aa11.28□□□□□ -0.6
COL4A6-209ENST00000545689 CTDSPLO15194 276 aa11.28□□□□□ -0.6
COL4A6-209ENST00000545689 CXCL13O43927 109 aa11.28□□□□□ -0.6
COL4A6-209ENST00000545689 METTL15P1P0C7V9 234 aa11.28□□□□□ -0.6
COL4A6-209ENST00000545689 METAP1P53582 386 aa11.28□□□□□ -0.6
COL4A6-209ENST00000545689 PPIAP62937 165 aaKnown RBP11.28□□□□□ -0.6
COL4A6-209ENST00000545689 PDZK1IP1Q13113 114 aa11.28□□□□□ -0.6
COL4A6-209ENST00000545689 TMEM268Q5VZI3 342 aa11.28□□□□□ -0.6
COL4A6-209ENST00000545689 IL34Q6ZMJ4 242 aa11.28□□□□□ -0.6
COL4A6-209ENST00000545689 OR51H1Q8NH63 302 aa11.28□□□□□ -0.6
COL4A6-209ENST00000545689 C8orf44Q96CB5 159 aa11.28□□□□□ -0.6
COL4A6-209ENST00000545689 C14orf79Q96F83 325 aa11.28□□□□□ -0.6
COL4A6-209ENST00000545689 CCL27Q9Y4X3 112 aa11.28□□□□□ -0.6
COL4A6-209ENST00000545689 SHROOM3Q8TF72 1996 aa11.28□□□□□ -0.6
COL4A6-209ENST00000545689 C5orf49A4QMS7 147 aa11.27□□□□□ -0.6
COL4A6-209ENST00000545689 TNFSF11O14788 317 aa11.27□□□□□ -0.6
COL4A6-209ENST00000545689 SCGB1D1O95968 90 aa11.27□□□□□ -0.6
COL4A6-209ENST00000545689 PRAMEF5Q5TYX0 476 aa11.27□□□□□ -0.6
COL4A6-209ENST00000545689 PRAMEF6Q5VXH4 476 aa11.27□□□□□ -0.6
COL4A6-209ENST00000545689 FAAP20Q6NZ36 180 aa11.27□□□□□ -0.6
COL4A6-209ENST00000545689 Q6ZRG5 221 aa11.27□□□□□ -0.6
COL4A6-209ENST00000545689 C4orf45Q96LM5 186 aa11.27□□□□□ -0.6
COL4A6-209ENST00000545689 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.27□□□□□ -0.6
COL4A6-209ENST00000545689 ALG1L2C9J202 215 aa11.27□□□□□ -0.6
COL4A6-209ENST00000545689 LRP3O75074 770 aa11.27□□□□□ -0.6
COL4A6-209ENST00000545689 AANATQ16613 207 aa11.27□□□□□ -0.6
COL4A6-209ENST00000545689 PELI1Q96FA3 418 aa11.27□□□□□ -0.6
COL4A6-209ENST00000545689 LINC01565O15544 149 aa11.27□□□□□ -0.61
COL4A6-209ENST00000545689 ABCD3P28288 659 aa11.27□□□□□ -0.61
COL4A6-209ENST00000545689 RAC1P63000 192 aa11.27□□□□□ -0.61
COL4A6-209ENST00000545689 TMED6Q8WW62 240 aa11.27□□□□□ -0.61
COL4A6-209ENST00000545689 KLK11Q9UBX7 282 aa11.27□□□□□ -0.61
COL4A6-209ENST00000545689 PROCRQ9UNN8 238 aa11.27□□□□□ -0.61
COL4A6-209ENST00000545689 UMAD1C9J7I0 102 aa11.27□□□□□ -0.61
COL4A6-209ENST00000545689 GSTZ1O43708 216 aaPredicted RBP11.27□□□□□ -0.61
COL4A6-209ENST00000545689 ENSAO43768 121 aaKnown RBP11.27□□□□□ -0.61
COL4A6-209ENST00000545689 OR13C7P0DN81 318 aa11.27□□□□□ -0.61
COL4A6-209ENST00000545689 FAM74A1Q5RGS3 127 aa11.27□□□□□ -0.61
COL4A6-209ENST00000545689 C11orf87Q6NUJ2 197 aa11.27□□□□□ -0.61
COL4A6-209ENST00000545689 TMPRSS7Q7RTY8 843 aa11.27□□□□□ -0.61
COL4A6-209ENST00000545689 APOBEC3DQ96AK3 386 aaPredicted RBP11.27□□□□□ -0.61
COL4A6-209ENST00000545689 ACTR3CQ9C0K3 210 aaPredicted RBP11.27□□□□□ -0.61
COL4A6-209ENST00000545689 MTFP1Q9UDX5 166 aa11.27□□□□□ -0.61
COL4A6-209ENST00000545689 ZFP92A6NM28 416 aa11.27□□□□□ -0.61
COL4A6-209ENST00000545689 ZNF724A8MTY0 619 aa11.27□□□□□ -0.61
COL4A6-209ENST00000545689 PIAS2O75928 621 aa11.27□□□□□ -0.61
COL4A6-209ENST00000545689 WISP3O95389 354 aaPredicted RBP11.27□□□□□ -0.61
COL4A6-209ENST00000545689 ZNF425Q6IV72 752 aa11.27□□□□□ -0.61
COL4A6-209ENST00000545689 FAM199XQ6PEV8 388 aaPredicted RBP11.27□□□□□ -0.61
COL4A6-209ENST00000545689 MENTQ9BUN1 341 aa11.27□□□□□ -0.61
COL4A6-209ENST00000545689 ACKR3P25106 362 aa11.26□□□□□ -0.61
COL4A6-209ENST00000545689 SCGB2A2Q13296 93 aa11.26□□□□□ -0.61
COL4A6-209ENST00000545689 ACOT6Q3I5F7 207 aaPredicted RBP11.26□□□□□ -0.61
COL4A6-209ENST00000545689 OR8G2PQ6IF36 304 aa11.26□□□□□ -0.61
COL4A6-209ENST00000545689 ADAMTSL1Q8N6G6 1762 aa11.26□□□□□ -0.61
COL4A6-209ENST00000545689 CTSVO60911 334 aa11.26□□□□□ -0.61
COL4A6-209ENST00000545689 IL11RAQ14626 422 aa11.26□□□□□ -0.61
COL4A6-209ENST00000545689 DRAM2Q6UX65 266 aa11.26□□□□□ -0.61
COL4A6-209ENST00000545689 ZNF547Q8IVP9 402 aa11.26□□□□□ -0.61
COL4A6-209ENST00000545689 SLC35E1Q96K37 410 aa11.26□□□□□ -0.61
COL4A6-209ENST00000545689 OR2C1O95371 312 aa11.26□□□□□ -0.61
COL4A6-209ENST00000545689 PIGPP57054 158 aa11.26□□□□□ -0.61
COL4A6-209ENST00000545689 TESK1Q15569 626 aa11.26□□□□□ -0.61
COL4A6-209ENST00000545689 SSX2Q16385 188 aa11.26□□□□□ -0.61
COL4A6-209ENST00000545689 WDR38Q5JTN6 314 aa11.26□□□□□ -0.61
COL4A6-209ENST00000545689 RPUSD3Q6P087 351 aaKnown RBP11.26□□□□□ -0.61
COL4A6-209ENST00000545689 ABI3BPQ7Z7G0 1075 aa11.26□□□□□ -0.61
COL4A6-209ENST00000545689 GLCCI1Q86VQ1 547 aa11.26□□□□□ -0.61
COL4A6-209ENST00000545689 CDC20BQ86Y33 519 aa11.26□□□□□ -0.61
COL4A6-209ENST00000545689 Q8IYB0 196 aa11.26□□□□□ -0.61
COL4A6-209ENST00000545689 OR1F12Q8NHA8 337 aa11.26□□□□□ -0.61
COL4A6-209ENST00000545689 PPP1R1CQ8WVI7 109 aa11.26□□□□□ -0.61
COL4A6-209ENST00000545689 ZNF707Q96C28 371 aaPredicted RBP11.26□□□□□ -0.61
COL4A6-209ENST00000545689 C20orf141Q9NUB4 165 aa11.26□□□□□ -0.61
COL4A6-209ENST00000545689 PPM1DO15297 605 aa11.26□□□□□ -0.61
COL4A6-209ENST00000545689 LY86O95711 162 aa11.26□□□□□ -0.61
COL4A6-209ENST00000545689 GPR12P47775 334 aa11.26□□□□□ -0.61
COL4A6-209ENST00000545689 NDUFA6P56556 154 aa11.26□□□□□ -0.61
COL4A6-209ENST00000545689 HYAL1Q12794 435 aa11.26□□□□□ -0.61
COL4A6-209ENST00000545689 EDDM3AQ14507 147 aa11.26□□□□□ -0.61
COL4A6-209ENST00000545689 MAMSTRQ6ZN01 415 aa11.26□□□□□ -0.61
COL4A6-209ENST00000545689 ST3GAL6Q9Y274 331 aa11.26□□□□□ -0.61
COL4A6-209ENST00000545689 PYCARD-AS1I3L0S3 204 aa11.26□□□□□ -0.61
COL4A6-209ENST00000545689 SDCBPO00560 298 aaPredicted RBP11.26□□□□□ -0.61
COL4A6-209ENST00000545689 NME2P1O60361 137 aa11.26□□□□□ -0.61
COL4A6-209ENST00000545689 F10P00742 488 aa11.26□□□□□ -0.61
COL4A6-209ENST00000545689 GP1BAP07359 652 aa11.26□□□□□ -0.61
COL4A6-209ENST00000545689 ZP3P21754 424 aa11.26□□□□□ -0.61
COL4A6-209ENST00000545689 CTGFP29279 349 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms