RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 HLA-DQA2P01906 255 aa6.48□□□□□ -1.37
SNHG1-223ENST00000545440 ACSM4P0C7M7 580 aa6.48□□□□□ -1.37
SNHG1-223ENST00000545440 ANPEPP15144 967 aa6.48□□□□□ -1.37
SNHG1-223ENST00000545440 ZNF3P17036 446 aa6.48□□□□□ -1.37
SNHG1-223ENST00000545440 SLC25A1P53007 311 aa6.48□□□□□ -1.37
SNHG1-223ENST00000545440 AVPI1Q5T686 147 aa6.48□□□□□ -1.37
SNHG1-223ENST00000545440 Q6ZR03 302 aa6.48□□□□□ -1.37
SNHG1-223ENST00000545440 COLCA1Q6ZS62 124 aa6.48□□□□□ -1.37
SNHG1-223ENST00000545440 IL17RELQ6ZVW7 336 aa6.48□□□□□ -1.37
SNHG1-223ENST00000545440 PEG10Q86TG7 708 aaKnown RBP6.48□□□□□ -1.37
SNHG1-223ENST00000545440 LINC00346Q8IVM7 164 aa6.48□□□□□ -1.37
SNHG1-223ENST00000545440 AQP12AQ8IXF9 295 aa6.48□□□□□ -1.37
SNHG1-223ENST00000545440 ADGRG5Q8IZF4 528 aa6.48□□□□□ -1.37
SNHG1-223ENST00000545440 PRR18Q8N4B5 295 aa6.48□□□□□ -1.37
SNHG1-223ENST00000545440 PROKR2Q8NFJ6 384 aa6.48□□□□□ -1.37
SNHG1-223ENST00000545440 OR2T33Q8NG76 320 aa6.48□□□□□ -1.37
SNHG1-223ENST00000545440 OR2Z1Q8NG97 314 aa6.48□□□□□ -1.37
SNHG1-223ENST00000545440 OR10G2Q8NGC3 310 aa6.48□□□□□ -1.37
SNHG1-223ENST00000545440 OR2AJ1Q8NGZ0 328 aa6.48□□□□□ -1.37
SNHG1-223ENST00000545440 TEX47Q8TBZ9 253 aa6.48□□□□□ -1.37
SNHG1-223ENST00000545440 TMEM158Q8WZ71 300 aa6.48□□□□□ -1.37
SNHG1-223ENST00000545440 CCL17Q92583 94 aa6.48□□□□□ -1.37
SNHG1-223ENST00000545440 PTP4A1Q93096 173 aa6.48□□□□□ -1.37
SNHG1-223ENST00000545440 HAVCR1Q96D42 359 aa6.48□□□□□ -1.37
SNHG1-223ENST00000545440 CMBLQ96DG6 245 aa6.48□□□□□ -1.37
SNHG1-223ENST00000545440 NEIL1Q96FI4 390 aaPredicted RBP6.48□□□□□ -1.37
SNHG1-223ENST00000545440 PITX2Q99697 317 aa6.48□□□□□ -1.37
SNHG1-223ENST00000545440 THTPAQ9BU02 230 aa6.48□□□□□ -1.37
SNHG1-223ENST00000545440 RBM4Q9BWF3 364 aaKnown RBP6.48□□□□□ -1.37
SNHG1-223ENST00000545440 C1QTNF5Q9BXJ0 243 aa6.48□□□□□ -1.37
SNHG1-223ENST00000545440 ZCCHC4Q9H5U6 513 aa6.48□□□□□ -1.37
SNHG1-223ENST00000545440 ZNF665Q9H7R5 613 aa6.48□□□□□ -1.37
SNHG1-223ENST00000545440 DDX28Q9NUL7 540 aaKnown RBP6.48□□□□□ -1.37
SNHG1-223ENST00000545440 HIF1ANQ9NWT6 349 aa6.48□□□□□ -1.37
SNHG1-223ENST00000545440 MRPL22Q9NWU5 206 aaKnown RBP6.48□□□□□ -1.37
SNHG1-223ENST00000545440 TREM2Q9NZC2 230 aa6.48□□□□□ -1.37
SNHG1-223ENST00000545440 IL19Q9UHD0 177 aa6.48□□□□□ -1.37
SNHG1-223ENST00000545440 OAZ3Q9UMX2 235 aa6.48□□□□□ -1.37
SNHG1-223ENST00000545440 STARD10Q9Y365 291 aa6.48□□□□□ -1.37
SNHG1-223ENST00000545440 COMMD3-BMI1R4GMX3 469 aa6.48□□□□□ -1.37
SNHG1-223ENST00000545440 A0A0G2JMP0 313 aa6.47□□□□□ -1.37
SNHG1-223ENST00000545440 A0A0X1KG70 313 aa6.47□□□□□ -1.37
SNHG1-223ENST00000545440 A0A1B0GWJ7 208 aa6.47□□□□□ -1.37
SNHG1-223ENST00000545440 RIIAD1A6NNX1 92 aa6.47□□□□□ -1.37
SNHG1-223ENST00000545440 RNF212BA8MTL3 300 aa6.47□□□□□ -1.37
SNHG1-223ENST00000545440 IFNL4K9M1U5 179 aa6.47□□□□□ -1.37
SNHG1-223ENST00000545440 PNPP00491 289 aa6.47□□□□□ -1.37
SNHG1-223ENST00000545440 IFNGP01579 166 aa6.47□□□□□ -1.37
SNHG1-223ENST00000545440 ZNF823P16415 610 aa6.47□□□□□ -1.37
SNHG1-223ENST00000545440 SELEP16581 610 aa6.47□□□□□ -1.37
SNHG1-223ENST00000545440 CFPP27918 469 aa6.47□□□□□ -1.37
SNHG1-223ENST00000545440 OTX1P32242 354 aaPredicted RBP6.47□□□□□ -1.37
SNHG1-223ENST00000545440 PYCR1P32322 319 aa6.47□□□□□ -1.37
SNHG1-223ENST00000545440 ERFP50548 548 aa6.47□□□□□ -1.37
SNHG1-223ENST00000545440 BLVRAP53004 296 aa6.47□□□□□ -1.37
SNHG1-223ENST00000545440 PPP1R8Q12972 351 aaKnown RBP6.47□□□□□ -1.37
SNHG1-223ENST00000545440 SCGB2A2Q13296 93 aa6.47□□□□□ -1.37
SNHG1-223ENST00000545440 CRMP1Q14194 572 aa6.47□□□□□ -1.37
SNHG1-223ENST00000545440 FLOT2Q14254 428 aa6.47□□□□□ -1.37
SNHG1-223ENST00000545440 HLXQ14774 488 aaPredicted RBP6.47□□□□□ -1.37
SNHG1-223ENST00000545440 PCK2Q16822 640 aa6.47□□□□□ -1.37
SNHG1-223ENST00000545440 RNF151Q2KHN1 245 aa6.47□□□□□ -1.37
SNHG1-223ENST00000545440 KRTAP19-4Q3LI73 84 aa6.47□□□□□ -1.37
SNHG1-223ENST00000545440 SPRNQ5BIV9 151 aa6.47□□□□□ -1.37
SNHG1-223ENST00000545440 ZNF362Q5T0B9 420 aaPredicted RBP6.47□□□□□ -1.37
SNHG1-223ENST00000545440 ACSM5Q6NUN0 579 aa6.47□□□□□ -1.37
SNHG1-223ENST00000545440 SLC27A4Q6P1M0 643 aa6.47□□□□□ -1.37
SNHG1-223ENST00000545440 TEX29Q8N6K0 151 aa6.47□□□□□ -1.37
SNHG1-223ENST00000545440 ZNF283Q8N7M2 679 aa6.47□□□□□ -1.37
SNHG1-223ENST00000545440 CYB561A3Q8NBI2 242 aa6.47□□□□□ -1.37
SNHG1-223ENST00000545440 SLC37A3Q8NCC5 494 aa6.47□□□□□ -1.37
SNHG1-223ENST00000545440 OR8G5Q8NG78 346 aa6.47□□□□□ -1.37
SNHG1-223ENST00000545440 OR4M2Q8NGB6 313 aa6.47□□□□□ -1.37
SNHG1-223ENST00000545440 OR13G1Q8NGZ3 307 aa6.47□□□□□ -1.37
SNHG1-223ENST00000545440 OR4Q3Q8NH05 313 aa6.47□□□□□ -1.37
SNHG1-223ENST00000545440 BCAS4Q8TDM0 211 aa6.47□□□□□ -1.37
SNHG1-223ENST00000545440 GIPC3Q8TF64 312 aa6.47□□□□□ -1.37
SNHG1-223ENST00000545440 SPTSSAQ969W0 71 aa6.47□□□□□ -1.37
SNHG1-223ENST00000545440 OR2V2Q96R30 315 aa6.47□□□□□ -1.37
SNHG1-223ENST00000545440 SIGLEC11Q96RL6 698 aa6.47□□□□□ -1.37
SNHG1-223ENST00000545440 GAL3ST1Q99999 423 aa6.47□□□□□ -1.37
SNHG1-223ENST00000545440 CHID1Q9BWS9 393 aa6.47□□□□□ -1.37
SNHG1-223ENST00000545440 TSSK6Q9BXA6 273 aa6.47□□□□□ -1.37
SNHG1-223ENST00000545440 HCAR1Q9BXC0 346 aa6.47□□□□□ -1.37
SNHG1-223ENST00000545440 NMNAT2Q9BZQ4 307 aa6.47□□□□□ -1.37
SNHG1-223ENST00000545440 TMEM106BQ9NUM4 274 aa6.47□□□□□ -1.37
SNHG1-223ENST00000545440 ARMC1Q9NVT9 282 aa6.47□□□□□ -1.37
SNHG1-223ENST00000545440 PTTG3PQ9NZH4 202 aa6.47□□□□□ -1.37
SNHG1-223ENST00000545440 NPTNQ9Y639 398 aa6.47□□□□□ -1.37
SNHG1-223ENST00000545440 FBN1P35555 2871 aaKnown RBP6.47□□□□□ -1.37
SNHG1-223ENST00000545440 UBE2QL1A1L167 161 aa6.46□□□□□ -1.38
SNHG1-223ENST00000545440 ISPDA4D126 451 aa6.46□□□□□ -1.38
SNHG1-223ENST00000545440 F5H5K5 113 aa6.46□□□□□ -1.38
SNHG1-223ENST00000545440 J3QLI3 93 aa6.46□□□□□ -1.38
SNHG1-223ENST00000545440 M0R135 149 aa6.46□□□□□ -1.38
SNHG1-223ENST00000545440 GYG2O15488 501 aa6.46□□□□□ -1.38
SNHG1-223ENST00000545440 CST1P01037 141 aa6.46□□□□□ -1.38
SNHG1-223ENST00000545440 IGHV2-70P01814 119 aa6.46□□□□□ -1.38
SNHG1-223ENST00000545440 SPI1P17947 270 aa6.46□□□□□ -1.38
SNHG1-223ENST00000545440 GATA3P23771 443 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms