RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 IGHV2-5P01817 119 aa13.26□□□□□ -0.29
CCDC78-216ENST00000544996 MRPL3P09001 348 aaKnown RBP13.26□□□□□ -0.29
CCDC78-216ENST00000544996 IRF2P14316 349 aa13.26□□□□□ -0.29
CCDC78-216ENST00000544996 SRD5A1P18405 259 aa13.26□□□□□ -0.29
CCDC78-216ENST00000544996 ALOX5APP20292 161 aa13.26□□□□□ -0.29
CCDC78-216ENST00000544996 GATA4P43694 442 aa13.26□□□□□ -0.29
CCDC78-216ENST00000544996 MZT1Q08AG7 82 aa13.26□□□□□ -0.29
CCDC78-216ENST00000544996 NXNL2Q5VZ03 156 aa13.26□□□□□ -0.29
CCDC78-216ENST00000544996 LRRN1Q6UXK5 716 aa13.26□□□□□ -0.29
CCDC78-216ENST00000544996 MEPCEQ7L2J0 689 aaKnown RBP13.26□□□□□ -0.29
CCDC78-216ENST00000544996 ZNF771Q7L3S4 317 aaPredicted RBP13.26□□□□□ -0.29
CCDC78-216ENST00000544996 KRT77Q7Z794 578 aa13.26□□□□□ -0.29
CCDC78-216ENST00000544996 MOGAT3Q86VF5 341 aa13.26□□□□□ -0.29
CCDC78-216ENST00000544996 KLBQ86Z14 1044 aa13.26□□□□□ -0.29
CCDC78-216ENST00000544996 GID4Q8IVV7 300 aa13.26□□□□□ -0.29
CCDC78-216ENST00000544996 C1orf87Q8N0U7 546 aa13.26□□□□□ -0.29
CCDC78-216ENST00000544996 SPERTQ8NA61 448 aa13.26□□□□□ -0.29
CCDC78-216ENST00000544996 OR56B2PQ8NGI1 322 aa13.26□□□□□ -0.29
CCDC78-216ENST00000544996 OR11L1Q8NGX0 322 aa13.26□□□□□ -0.29
CCDC78-216ENST00000544996 ASB17Q8WXJ9 295 aa13.26□□□□□ -0.29
CCDC78-216ENST00000544996 ERGIC1Q969X5 290 aa13.26□□□□□ -0.29
CCDC78-216ENST00000544996 SGK3Q96BR1 496 aa13.26□□□□□ -0.29
CCDC78-216ENST00000544996 IL4I1Q96RQ9 567 aa13.26□□□□□ -0.29
CCDC78-216ENST00000544996 CNN2Q99439 309 aaKnown RBP13.26□□□□□ -0.29
CCDC78-216ENST00000544996 PKP2Q99959 881 aa13.26□□□□□ -0.29
CCDC78-216ENST00000544996 ADAT1Q9BUB4 502 aaKnown RBP13.26□□□□□ -0.29
CCDC78-216ENST00000544996 GABARAPL3Q9BY60 117 aa13.26□□□□□ -0.29
CCDC78-216ENST00000544996 MROQ9BYG7 248 aa13.26□□□□□ -0.29
CCDC78-216ENST00000544996 RGCCQ9H4X1 137 aa13.26□□□□□ -0.29
CCDC78-216ENST00000544996 BRD7Q9NPI1 651 aa13.26□□□□□ -0.29
CCDC78-216ENST00000544996 DCAF16Q9NXF7 216 aa13.26□□□□□ -0.29
CCDC78-216ENST00000544996 SONP18583 2426 aaKnown RBP13.25□□□□□ -0.29
CCDC78-216ENST00000544996 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.25□□□□□ -0.29
CCDC78-216ENST00000544996 IGHV3-64DA0A0J9YX35 117 aa13.25□□□□□ -0.29
CCDC78-216ENST00000544996 CCDC182A6NF36 153 aa13.25□□□□□ -0.29
CCDC78-216ENST00000544996 ANKRD30BLA7E2S9 258 aa13.25□□□□□ -0.29
CCDC78-216ENST00000544996 H3BNX3 289 aa13.25□□□□□ -0.29
CCDC78-216ENST00000544996 M0R129 80 aa13.25□□□□□ -0.29
CCDC78-216ENST00000544996 MDH2P40926 338 aaKnown RBP13.25□□□□□ -0.29
CCDC78-216ENST00000544996 CD200P41217 278 aa13.25□□□□□ -0.29
CCDC78-216ENST00000544996 HCCSP53701 268 aa13.25□□□□□ -0.29
CCDC78-216ENST00000544996 EFNB1P98172 346 aa13.25□□□□□ -0.29
CCDC78-216ENST00000544996 SNCBQ16143 134 aa13.25□□□□□ -0.29
CCDC78-216ENST00000544996 ZNF181Q2M3W8 571 aa13.25□□□□□ -0.29
CCDC78-216ENST00000544996 GFOD2Q3B7J2 385 aa13.25□□□□□ -0.29
CCDC78-216ENST00000544996 TMEM155Q4W5P6 130 aa13.25□□□□□ -0.29
CCDC78-216ENST00000544996 DEGS2Q6QHC5 323 aa13.25□□□□□ -0.29
CCDC78-216ENST00000544996 PRSS45Q7RTY3 260 aa13.25□□□□□ -0.29
CCDC78-216ENST00000544996 LRRC28Q86X40 367 aaPredicted RBP13.25□□□□□ -0.29
CCDC78-216ENST00000544996 MUC20Q8N307 709 aaPredicted RBP13.25□□□□□ -0.29
CCDC78-216ENST00000544996 FTMTQ8N4E7 242 aa13.25□□□□□ -0.29
CCDC78-216ENST00000544996 ZNF420Q8TAQ5 688 aaPredicted RBP13.25□□□□□ -0.29
CCDC78-216ENST00000544996 SIGLEC11Q96RL6 698 aa13.25□□□□□ -0.29
CCDC78-216ENST00000544996 KLHDC2Q9Y2U9 406 aa13.25□□□□□ -0.29
CCDC78-216ENST00000544996 YLPM1P49750 1951 aaKnown RBP13.25□□□□□ -0.29
CCDC78-216ENST00000544996 PLPP2O43688 288 aa13.24□□□□□ -0.29
CCDC78-216ENST00000544996 ANOS1P23352 680 aa13.24□□□□□ -0.29
CCDC78-216ENST00000544996 POLR2IP36954 125 aaKnown RBP13.24□□□□□ -0.29
CCDC78-216ENST00000544996 SRP14P37108 136 aaKnown RBP13.24□□□□□ -0.29
CCDC78-216ENST00000544996 PSMA6P60900 246 aaKnown RBP13.24□□□□□ -0.29
CCDC78-216ENST00000544996 FAM3AP98173 230 aa13.24□□□□□ -0.29
CCDC78-216ENST00000544996 MAB21L1Q13394 359 aa13.24□□□□□ -0.29
CCDC78-216ENST00000544996 ZMYND11Q15326 602 aa13.24□□□□□ -0.29
CCDC78-216ENST00000544996 AADACL4Q5VUY2 407 aa13.24□□□□□ -0.29
CCDC78-216ENST00000544996 FAHD2BQ6P2I3 314 aaPredicted RBP13.24□□□□□ -0.29
CCDC78-216ENST00000544996 IL17RELQ6ZVW7 336 aa13.24□□□□□ -0.29
CCDC78-216ENST00000544996 BCDIN3DQ7Z5W3 292 aaKnown RBP13.24□□□□□ -0.29
CCDC78-216ENST00000544996 PLPP7Q8NBV4 271 aa13.24□□□□□ -0.29
CCDC78-216ENST00000544996 FAHD2AQ96GK7 314 aa13.24□□□□□ -0.29
CCDC78-216ENST00000544996 MNTQ99583 582 aa13.24□□□□□ -0.29
CCDC78-216ENST00000544996 FN3KRPQ9HA64 309 aa13.24□□□□□ -0.29
CCDC78-216ENST00000544996 C14orf119Q9NWQ9 140 aa13.24□□□□□ -0.29
CCDC78-216ENST00000544996 ZNF391Q9UJN7 358 aa13.24□□□□□ -0.29
CCDC78-216ENST00000544996 LRP12Q9Y561 859 aa13.24□□□□□ -0.29
CCDC78-216ENST00000544996 A0A0G2JMP0 313 aa13.23□□□□□ -0.29
CCDC78-216ENST00000544996 A0A0X1KG70 313 aa13.23□□□□□ -0.29
CCDC78-216ENST00000544996 KIAA1324LA8MWY0 1029 aaPredicted RBP13.23□□□□□ -0.29
CCDC78-216ENST00000544996 PHYHO14832 338 aa13.23□□□□□ -0.29
CCDC78-216ENST00000544996 ZNF254O75437 659 aa13.23□□□□□ -0.29
CCDC78-216ENST00000544996 CYB5R3P00387 301 aaPredicted RBP13.23□□□□□ -0.29
CCDC78-216ENST00000544996 ALPLP05186 524 aa13.23□□□□□ -0.29
CCDC78-216ENST00000544996 GSK3AP49840 483 aa13.23□□□□□ -0.29
CCDC78-216ENST00000544996 CDC42P60953 191 aa13.23□□□□□ -0.29
CCDC78-216ENST00000544996 ROM1Q03395 351 aa13.23□□□□□ -0.29
CCDC78-216ENST00000544996 HNRNPA0Q13151 305 aaKnown RBP13.23□□□□□ -0.29
CCDC78-216ENST00000544996 ZNF679Q8IYX0 411 aa13.23□□□□□ -0.29
CCDC78-216ENST00000544996 TEX29Q8N6K0 151 aa13.23□□□□□ -0.29
CCDC78-216ENST00000544996 CSNK2A3Q8NEV1 391 aa13.23□□□□□ -0.29
CCDC78-216ENST00000544996 OR4M2Q8NGB6 313 aa13.23□□□□□ -0.29
CCDC78-216ENST00000544996 OR8J1Q8NGP2 316 aa13.23□□□□□ -0.29
CCDC78-216ENST00000544996 OR8S1Q8NH09 359 aa13.23□□□□□ -0.29
CCDC78-216ENST00000544996 Q8TCH9 128 aa13.23□□□□□ -0.29
CCDC78-216ENST00000544996 UFSP2Q9NUQ7 469 aa13.23□□□□□ -0.29
CCDC78-216ENST00000544996 HAO2Q9NYQ3 351 aa13.23□□□□□ -0.29
CCDC78-216ENST00000544996 WARS2Q9UGM6 360 aaKnown RBP13.23□□□□□ -0.29
CCDC78-216ENST00000544996 PPIAL4EA0A075B759 164 aa13.22□□□□□ -0.29
CCDC78-216ENST00000544996 hCG_38984A0A1B0GV85 526 aa13.22□□□□□ -0.29
CCDC78-216ENST00000544996 TMEM269A0A1B0GVZ9 245 aa13.22□□□□□ -0.29
CCDC78-216ENST00000544996 ACOD1A6NK06 481 aa13.22□□□□□ -0.29
CCDC78-216ENST00000544996 PPIAL4DF5H284 164 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms