RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 TIGD6Q17RP2 521 aa9.96□□□□□ -0.82
HDAC4-216ENST00000544989 SNAI3Q3KNW1 292 aa9.96□□□□□ -0.82
HDAC4-216ENST00000544989 GLYATL3Q5SZD4 288 aa9.96□□□□□ -0.82
HDAC4-216ENST00000544989 KDM4DQ6B0I6 523 aa9.96□□□□□ -0.82
HDAC4-216ENST00000544989 ZFP1Q6P2D0 407 aa9.96□□□□□ -0.82
HDAC4-216ENST00000544989 DEGS2Q6QHC5 323 aa9.96□□□□□ -0.82
HDAC4-216ENST00000544989 ASRGL1Q7L266 308 aa9.96□□□□□ -0.82
HDAC4-216ENST00000544989 SLC16A9Q7RTY1 509 aa9.96□□□□□ -0.82
HDAC4-216ENST00000544989 NAA40Q86UY6 237 aa9.96□□□□□ -0.82
HDAC4-216ENST00000544989 ASB17Q8WXJ9 295 aa9.96□□□□□ -0.82
HDAC4-216ENST00000544989 TMEM158Q8WZ71 300 aa9.96□□□□□ -0.82
HDAC4-216ENST00000544989 MNTQ99583 582 aa9.96□□□□□ -0.82
HDAC4-216ENST00000544989 FN3KRPQ9HA64 309 aa9.96□□□□□ -0.82
HDAC4-216ENST00000544989 ABCB9Q9NP78 766 aa9.96□□□□□ -0.82
HDAC4-216ENST00000544989 TRIM36Q9NQ86 728 aa9.96□□□□□ -0.82
HDAC4-216ENST00000544989 C14orf119Q9NWQ9 140 aa9.96□□□□□ -0.82
HDAC4-216ENST00000544989 UBAP1Q9NZ09 502 aa9.96□□□□□ -0.82
HDAC4-216ENST00000544989 LAMP5Q9UJQ1 280 aa9.96□□□□□ -0.82
HDAC4-216ENST00000544989 DYSFO75923 2080 aa9.95□□□□□ -0.82
HDAC4-216ENST00000544989 ACOD1A6NK06 481 aa9.95□□□□□ -0.82
HDAC4-216ENST00000544989 SLC22A31A6NKX4 558 aa9.95□□□□□ -0.82
HDAC4-216ENST00000544989 ANKRD30BLA7E2S9 258 aa9.95□□□□□ -0.82
HDAC4-216ENST00000544989 F5H5P2 479 aa9.95□□□□□ -0.82
HDAC4-216ENST00000544989 PHYHO14832 338 aa9.95□□□□□ -0.82
HDAC4-216ENST00000544989 MLNRO43193 412 aa9.95□□□□□ -0.82
HDAC4-216ENST00000544989 TBX1O43435 398 aa9.95□□□□□ -0.82
HDAC4-216ENST00000544989 PLPP2O43688 288 aa9.95□□□□□ -0.82
HDAC4-216ENST00000544989 PSKH1P11801 424 aa9.95□□□□□ -0.82
HDAC4-216ENST00000544989 SLC2A5P22732 501 aa9.95□□□□□ -0.82
HDAC4-216ENST00000544989 ACTR3P61158 418 aa9.95□□□□□ -0.82
HDAC4-216ENST00000544989 APOFQ13790 326 aa9.95□□□□□ -0.82
HDAC4-216ENST00000544989 LIPNQ5VXI9 398 aa9.95□□□□□ -0.82
HDAC4-216ENST00000544989 FAHD2BQ6P2I3 314 aaPredicted RBP9.95□□□□□ -0.82
HDAC4-216ENST00000544989 GID4Q8IVV7 300 aa9.95□□□□□ -0.82
HDAC4-216ENST00000544989 RFLNBQ8N5W9 214 aa9.95□□□□□ -0.82
HDAC4-216ENST00000544989 CSNK2A3Q8NEV1 391 aa9.95□□□□□ -0.82
HDAC4-216ENST00000544989 THEM6Q8WUY1 208 aa9.95□□□□□ -0.82
HDAC4-216ENST00000544989 FAHD2AQ96GK7 314 aa9.95□□□□□ -0.82
HDAC4-216ENST00000544989 SIGLEC11Q96RL6 698 aa9.95□□□□□ -0.82
HDAC4-216ENST00000544989 TEAD3Q99594 435 aa9.95□□□□□ -0.82
HDAC4-216ENST00000544989 ADAT1Q9BUB4 502 aaKnown RBP9.95□□□□□ -0.82
HDAC4-216ENST00000544989 PATZ1Q9HBE1 687 aaKnown RBP9.95□□□□□ -0.82
HDAC4-216ENST00000544989 LPAR2Q9HBW0 351 aa9.95□□□□□ -0.82
HDAC4-216ENST00000544989 MIOXQ9UGB7 285 aa9.95□□□□□ -0.82
HDAC4-216ENST00000544989 LRCH1Q9Y2L9 728 aa9.95□□□□□ -0.82
HDAC4-216ENST00000544989 POLR3KQ9Y2Y1 108 aaPredicted RBP9.95□□□□□ -0.82
HDAC4-216ENST00000544989 ZAR1LA6NP61 321 aa9.94□□□□□ -0.82
HDAC4-216ENST00000544989 EBAG9O00559 213 aa9.94□□□□□ -0.82
HDAC4-216ENST00000544989 SELENOFO60613 162 aa9.94□□□□□ -0.82
HDAC4-216ENST00000544989 ZNF254O75437 659 aa9.94□□□□□ -0.82
HDAC4-216ENST00000544989 CA6P23280 308 aa9.94□□□□□ -0.82
HDAC4-216ENST00000544989 DCTDP32321 178 aa9.94□□□□□ -0.82
HDAC4-216ENST00000544989 ZNF121P58317 390 aaPredicted RBP9.94□□□□□ -0.82
HDAC4-216ENST00000544989 ZMYND11Q15326 602 aa9.94□□□□□ -0.82
HDAC4-216ENST00000544989 ESCO2Q56NI9 601 aa9.94□□□□□ -0.82
HDAC4-216ENST00000544989 SPRNQ5BIV9 151 aa9.94□□□□□ -0.82
HDAC4-216ENST00000544989 DCAF12L2Q5VW00 463 aa9.94□□□□□ -0.82
HDAC4-216ENST00000544989 SLX4IPQ5VYV7 408 aa9.94□□□□□ -0.82
HDAC4-216ENST00000544989 NXNL2Q5VZ03 156 aa9.94□□□□□ -0.82
HDAC4-216ENST00000544989 TMEM236Q5W0B7 351 aa9.94□□□□□ -0.82
HDAC4-216ENST00000544989 SPATC1Q76KD6 591 aa9.94□□□□□ -0.82
HDAC4-216ENST00000544989 NLRC3Q7RTR2 1065 aa9.94□□□□□ -0.82
HDAC4-216ENST00000544989 KRT77Q7Z794 578 aa9.94□□□□□ -0.82
HDAC4-216ENST00000544989 MOGAT3Q86VF5 341 aa9.94□□□□□ -0.82
HDAC4-216ENST00000544989 OR56B2PQ8NGI1 322 aa9.94□□□□□ -0.82
HDAC4-216ENST00000544989 OR2AE1Q8NHA4 323 aa9.94□□□□□ -0.82
HDAC4-216ENST00000544989 TMEM163Q8TC26 289 aa9.94□□□□□ -0.82
HDAC4-216ENST00000544989 LRTOMTQ8WZ04 291 aa9.94□□□□□ -0.82
HDAC4-216ENST00000544989 REEP6Q96HR9 211 aa9.94□□□□□ -0.82
HDAC4-216ENST00000544989 PGAM5Q96HS1 289 aa9.94□□□□□ -0.82
HDAC4-216ENST00000544989 CNN2Q99439 309 aaKnown RBP9.94□□□□□ -0.82
HDAC4-216ENST00000544989 RBM4BQ9BQ04 359 aaKnown RBP9.94□□□□□ -0.82
HDAC4-216ENST00000544989 MROQ9BYG7 248 aa9.94□□□□□ -0.82
HDAC4-216ENST00000544989 G6PC2Q9NQR9 355 aa9.94□□□□□ -0.82
HDAC4-216ENST00000544989 METRNQ9UJH8 293 aa9.94□□□□□ -0.82
HDAC4-216ENST00000544989 N6AMT1Q9Y5N5 214 aa9.94□□□□□ -0.82
HDAC4-216ENST00000544989 ORC6Q9Y5N6 252 aa9.94□□□□□ -0.82
HDAC4-216ENST00000544989 A0A0A6YYJ9 748 aa9.93□□□□□ -0.82
HDAC4-216ENST00000544989 A8MXK9 166 aa9.93□□□□□ -0.82
HDAC4-216ENST00000544989 F5H0A9 414 aaPredicted RBP9.93□□□□□ -0.82
HDAC4-216ENST00000544989 H0YL77 283 aa9.93□□□□□ -0.82
HDAC4-216ENST00000544989 PTBP3O95758 552 aaKnown RBP9.93□□□□□ -0.82
HDAC4-216ENST00000544989 HLA-DPB1P04440 258 aa9.93□□□□□ -0.82
HDAC4-216ENST00000544989 SLC2A1P11166 492 aa9.93□□□□□ -0.82
HDAC4-216ENST00000544989 ALOX5APP20292 161 aa9.93□□□□□ -0.82
HDAC4-216ENST00000544989 GNALP38405 381 aa9.93□□□□□ -0.82
HDAC4-216ENST00000544989 NAA10P41227 235 aaPredicted RBP9.93□□□□□ -0.82
HDAC4-216ENST00000544989 PSMA6P60900 246 aaKnown RBP9.93□□□□□ -0.82
HDAC4-216ENST00000544989 POU4F2Q12837 409 aa9.93□□□□□ -0.82
HDAC4-216ENST00000544989 MAB21L1Q13394 359 aa9.93□□□□□ -0.82
HDAC4-216ENST00000544989 C12orf73Q69YU5 71 aa9.93□□□□□ -0.82
HDAC4-216ENST00000544989 IL17RELQ6ZVW7 336 aa9.93□□□□□ -0.82
HDAC4-216ENST00000544989 FAM57BQ71RH2 274 aa9.93□□□□□ -0.82
HDAC4-216ENST00000544989 MEPCEQ7L2J0 689 aaKnown RBP9.93□□□□□ -0.82
HDAC4-216ENST00000544989 PRSS45Q7RTY3 260 aa9.93□□□□□ -0.82
HDAC4-216ENST00000544989 AMIGO2Q86SJ2 522 aa9.93□□□□□ -0.82
HDAC4-216ENST00000544989 BBS1Q8NFJ9 593 aa9.93□□□□□ -0.82
HDAC4-216ENST00000544989 OR8S1Q8NH09 359 aa9.93□□□□□ -0.82
HDAC4-216ENST00000544989 DNAJC27Q9NZQ0 273 aa9.93□□□□□ -0.82
HDAC4-216ENST00000544989 RNF7Q9UBF6 113 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms