RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 OR5T1Q8NG75 326 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 NANOS1Q8WY41 292 aaKnown RBP5.19□□□□□ -1.58
VPS50-220ENST00000544910 EDAQ92838 391 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 BORCS7Q96B45 105 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 C8orf44Q96CB5 159 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 TMEM68Q96MH6 324 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 NICN1Q9BSH3 213 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 MTFP1Q9UDX5 166 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 SLC5A6Q9Y289 635 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 A0A1W2PNR3 127 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 TMEM235A6NFC5 223 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 J3QR89 54 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 ZIC2O95409 532 aaPredicted RBP5.19□□□□□ -1.58
VPS50-220ENST00000544910 PTHLHP12272 177 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 TBPP20226 339 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 SDHBP21912 280 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 BLVRBP30043 206 aaPredicted RBP5.19□□□□□ -1.58
VPS50-220ENST00000544910 MTCP1P56278 107 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 CARD18P57730 90 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 SMRP1Q8NCR6 262 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 CTHRC1Q96CG8 243 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 GPX7Q96SL4 187 aaPredicted RBP5.19□□□□□ -1.58
VPS50-220ENST00000544910 CMSS1Q9BQ75 279 aaKnown RBP5.19□□□□□ -1.58
VPS50-220ENST00000544910 KLHDC2Q9Y2U9 406 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 PCDHGA1Q9Y5H4 931 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 HELZP42694 1942 aaKnown RBP5.19□□□□□ -1.58
VPS50-220ENST00000544910 G3V3Y1 287 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 BET1O15155 118 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 ASAH2BP0C7U1 165 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 SULT1A3P0DMM9 295 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 SULT1A4P0DMN0 295 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 ZNF44P15621 663 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 CBR1P16152 277 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 THBS2P35442 1172 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 NPY4RP50391 375 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 SRPXP78539 464 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 PWWP2BQ6NUJ5 590 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 ZNF574Q6ZN55 896 aaPredicted RBP5.19□□□□□ -1.58
VPS50-220ENST00000544910 SLC16A14Q7RTX9 510 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 MRPL21Q7Z2W9 205 aaKnown RBP5.19□□□□□ -1.58
VPS50-220ENST00000544910 CATSPERDQ86XM0 798 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 SPEM1Q8N4L4 309 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 EXD3Q8N9H8 876 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 ZSCAN4Q8NAM6 433 aaPredicted RBP5.19□□□□□ -1.58
VPS50-220ENST00000544910 OR5D18Q8NGL1 313 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 OR1J2Q8NGS2 313 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 OR1S1Q8NH92 325 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 C11orf40Q8WZ69 217 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 PTDSS2Q9BVG9 487 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 BANF2Q9H503 90 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 NARFLQ9H6Q4 476 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 ZNF286AQ9HBT8 521 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 ANAPC1Q9H1A4 1944 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 MTCL1Q9Y4B5 1905 aaKnown RBP5.19□□□□□ -1.58
VPS50-220ENST00000544910 A6NCN8 305 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 WNT11O96014 354 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 HLA-HP01893 362 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 LINC00271P0C7V0 271 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 SLC2A1P11166 492 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 NME2P22392 152 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 APLNRP35414 380 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 AKR1C2P52895 323 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 MFAP5Q13361 173 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 Q3ZCU0 254 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 SMUG1Q53HV7 270 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 UNQ6126/PRO20091Q6UXV3 157 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 AKR7LQ8NHP1 331 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 MITD1Q8WV92 249 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 KISS1RQ969F8 398 aaPredicted RBP5.19□□□□□ -1.58
VPS50-220ENST00000544910 ZNF106Q9H2Y7 1883 aaKnown RBP5.19□□□□□ -1.58
VPS50-220ENST00000544910 GPR84Q9NQS5 396 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 ZNF275Q9NSD4 429 aaPredicted RBP5.19□□□□□ -1.58
VPS50-220ENST00000544910 NECAP2Q9NVZ3 263 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 ASH2LQ9UBL3 628 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 PURGQ9UJV8 347 aaKnown RBP5.19□□□□□ -1.58
VPS50-220ENST00000544910 KCNS2Q9ULS6 477 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 BOKQ9UMX3 212 aaPredicted RBP5.19□□□□□ -1.58
VPS50-220ENST00000544910 STRAPQ9Y3F4 350 aaKnown RBP5.19□□□□□ -1.58
VPS50-220ENST00000544910 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 SCO1O75880 301 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 IGF2P01344 180 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 SERPINA7P05543 415 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 HOXB5P09067 269 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 HRH1P35367 487 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 EFNA3P52797 238 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 ZNF121P58317 390 aaPredicted RBP5.18□□□□□ -1.58
VPS50-220ENST00000544910 IGLV3-21P80748 117 aaPredicted RBP5.18□□□□□ -1.58
VPS50-220ENST00000544910 IFITM2Q01629 132 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 FMODQ06828 376 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 RNF151Q2KHN1 245 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 EXOSC6Q5RKV6 272 aaKnown RBP5.18□□□□□ -1.58
VPS50-220ENST00000544910 ZNF684Q5T5D7 378 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 ABHD17BQ5VST6 288 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 AAED1Q7RTV5 226 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 LIX1LQ8IVB5 337 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 C9orf40Q8IXQ3 194 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 MAML2Q8IZL2 1156 aaPredicted RBP5.18□□□□□ -1.58
VPS50-220ENST00000544910 D2HGDHQ8N465 521 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 RHBDD1Q8TEB9 315 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 PIGTQ969N2 578 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 153 ms