RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 TBCCD1Q9NVR7 557 aa8.25□□□□□ -1.09
YBX3-215ENST00000544504 RSL24D1Q9UHA3 163 aaKnown RBP8.25□□□□□ -1.09
YBX3-215ENST00000544504 FLNAP21333 2647 aaKnown RBP8.25□□□□□ -1.09
YBX3-215ENST00000544504 LOC107986453A0A1B0GWG9 222 aa8.24□□□□□ -1.09
YBX3-215ENST00000544504 LOC390937A0A1W2PQ73 354 aa8.24□□□□□ -1.09
YBX3-215ENST00000544504 DHRS7CA6NNS2 312 aa8.24□□□□□ -1.09
YBX3-215ENST00000544504 H3BSA7 217 aa8.24□□□□□ -1.09
YBX3-215ENST00000544504 TBX1O43435 398 aa8.24□□□□□ -1.09
YBX3-215ENST00000544504 PNPP00491 289 aa8.24□□□□□ -1.09
YBX3-215ENST00000544504 CRYAAP02489 173 aa8.24□□□□□ -1.09
YBX3-215ENST00000544504 GADD45AP24522 165 aa8.24□□□□□ -1.09
YBX3-215ENST00000544504 PTAFRP25105 342 aa8.24□□□□□ -1.09
YBX3-215ENST00000544504 RANBP1P43487 201 aa8.24□□□□□ -1.09
YBX3-215ENST00000544504 KIR3DL2P43630 455 aa8.24□□□□□ -1.09
YBX3-215ENST00000544504 NANOS3P60323 173 aaKnown RBP8.24□□□□□ -1.09
YBX3-215ENST00000544504 TUBA1BP68363 451 aa8.24□□□□□ -1.09
YBX3-215ENST00000544504 MFGE8Q08431 387 aaPredicted RBP8.24□□□□□ -1.09
YBX3-215ENST00000544504 TAB1Q15750 504 aa8.24□□□□□ -1.09
YBX3-215ENST00000544504 Q499Y3 187 aa8.24□□□□□ -1.09
YBX3-215ENST00000544504 TMEM108Q6UXF1 575 aa8.24□□□□□ -1.09
YBX3-215ENST00000544504 COLCA1Q6ZS62 124 aa8.24□□□□□ -1.09
YBX3-215ENST00000544504 TUBA1AQ71U36 451 aa8.24□□□□□ -1.09
YBX3-215ENST00000544504 DOK3Q7L591 496 aa8.24□□□□□ -1.09
YBX3-215ENST00000544504 COMMD2Q86X83 199 aa8.24□□□□□ -1.09
YBX3-215ENST00000544504 PRSS35Q8N3Z0 413 aa8.24□□□□□ -1.09
YBX3-215ENST00000544504 KBTBD8Q8NFY9 601 aa8.24□□□□□ -1.09
YBX3-215ENST00000544504 OR8B12Q8NGG6 310 aa8.24□□□□□ -1.09
YBX3-215ENST00000544504 ABHD4Q8TB40 342 aa8.24□□□□□ -1.09
YBX3-215ENST00000544504 RNF166Q96A37 237 aaPredicted RBP8.24□□□□□ -1.09
YBX3-215ENST00000544504 ISOC1Q96CN7 298 aa8.24□□□□□ -1.09
YBX3-215ENST00000544504 C10orf35Q96D05 121 aa8.24□□□□□ -1.09
YBX3-215ENST00000544504 KCTD7Q96MP8 289 aa8.24□□□□□ -1.09
YBX3-215ENST00000544504 ZNF75AQ96N20 296 aa8.24□□□□□ -1.09
YBX3-215ENST00000544504 MED18Q9BUE0 208 aa8.24□□□□□ -1.09
YBX3-215ENST00000544504 RBM38Q9H0Z9 239 aaKnown RBP8.24□□□□□ -1.09
YBX3-215ENST00000544504 SLITRK2Q9H156 845 aa8.24□□□□□ -1.09
YBX3-215ENST00000544504 NOX3Q9HBY0 568 aa8.24□□□□□ -1.09
YBX3-215ENST00000544504 SLC24A3Q9HC58 644 aa8.24□□□□□ -1.09
YBX3-215ENST00000544504 NEK6Q9HC98 313 aa8.24□□□□□ -1.09
YBX3-215ENST00000544504 BRD7Q9NPI1 651 aa8.24□□□□□ -1.09
YBX3-215ENST00000544504 KCNN3Q9UGI6 736 aa8.24□□□□□ -1.09
YBX3-215ENST00000544504 DHDHQ9UQ10 334 aa8.24□□□□□ -1.09
YBX3-215ENST00000544504 SLC22A13Q9Y226 551 aa8.24□□□□□ -1.09
YBX3-215ENST00000544504 SF3B6Q9Y3B4 125 aaKnown RBP8.24□□□□□ -1.09
YBX3-215ENST00000544504 SIRT4Q9Y6E7 314 aaPredicted RBP8.24□□□□□ -1.09
YBX3-215ENST00000544504 CEPT1Q9Y6K0 416 aa8.24□□□□□ -1.09
YBX3-215ENST00000544504 STAB1Q9NY15 2570 aa8.23□□□□□ -1.09
YBX3-215ENST00000544504 LOC100509620A0A075B734 347 aa8.23□□□□□ -1.09
YBX3-215ENST00000544504 LOC100506127A0A0U1RQW1 187 aa8.23□□□□□ -1.09
YBX3-215ENST00000544504 ZNF503-AS2A6NEH8 195 aa8.23□□□□□ -1.09
YBX3-215ENST00000544504 GABRPO00591 440 aa8.23□□□□□ -1.09
YBX3-215ENST00000544504 SYT7O43581 403 aa8.23□□□□□ -1.09
YBX3-215ENST00000544504 ATE1O95260 518 aa8.23□□□□□ -1.09
YBX3-215ENST00000544504 TTRP02766 147 aa8.23□□□□□ -1.09
YBX3-215ENST00000544504 DBHP09172 617 aa8.23□□□□□ -1.09
YBX3-215ENST00000544504 OCM2P0CE71 109 aa8.23□□□□□ -1.09
YBX3-215ENST00000544504 EPXP11678 715 aa8.23□□□□□ -1.09
YBX3-215ENST00000544504 CCL1P22362 96 aa8.23□□□□□ -1.09
YBX3-215ENST00000544504 CCNOP22674 350 aa8.23□□□□□ -1.09
YBX3-215ENST00000544504 MYL9P24844 172 aa8.23□□□□□ -1.09
YBX3-215ENST00000544504 CCKARP32238 428 aa8.23□□□□□ -1.09
YBX3-215ENST00000544504 CRYBB2P43320 205 aa8.23□□□□□ -1.09
YBX3-215ENST00000544504 RAD52P43351 418 aa8.23□□□□□ -1.09
YBX3-215ENST00000544504 MAP2K3P46734 347 aa8.23□□□□□ -1.09
YBX3-215ENST00000544504 RPS23P62266 143 aaKnown RBP8.23□□□□□ -1.09
YBX3-215ENST00000544504 RPS25P62851 125 aaKnown RBP8.23□□□□□ -1.09
YBX3-215ENST00000544504 RSPO1Q2MKA7 263 aaPredicted RBP8.23□□□□□ -1.09
YBX3-215ENST00000544504 ACSM3Q53FZ2 586 aa8.23□□□□□ -1.09
YBX3-215ENST00000544504 ZMAT1Q5H9K5 638 aa8.23□□□□□ -1.09
YBX3-215ENST00000544504 SEZ6L2Q6UXD5 910 aa8.23□□□□□ -1.09
YBX3-215ENST00000544504 PRSS45Q7RTY3 260 aa8.23□□□□□ -1.09
YBX3-215ENST00000544504 ZNF584Q8IVC4 421 aa8.23□□□□□ -1.09
YBX3-215ENST00000544504 FTMTQ8N4E7 242 aa8.23□□□□□ -1.09
YBX3-215ENST00000544504 OR13C3Q8NGS6 347 aa8.23□□□□□ -1.09
YBX3-215ENST00000544504 TSEN15Q8WW01 171 aaKnown RBP8.23□□□□□ -1.09
YBX3-215ENST00000544504 SLC7A6Q92536 515 aa8.23□□□□□ -1.09
YBX3-215ENST00000544504 NRGNQ92686 78 aa8.23□□□□□ -1.09
YBX3-215ENST00000544504 TMEM203Q969S6 136 aa8.23□□□□□ -1.09
YBX3-215ENST00000544504 PDCD1LG2Q9BQ51 273 aa8.23□□□□□ -1.09
YBX3-215ENST00000544504 CHCHD6Q9BRQ6 235 aa8.23□□□□□ -1.09
YBX3-215ENST00000544504 BCL2L14Q9BZR8 327 aa8.23□□□□□ -1.09
YBX3-215ENST00000544504 PLEKHA1Q9HB21 404 aa8.23□□□□□ -1.09
YBX3-215ENST00000544504 CKLFQ9UBR5 152 aa8.23□□□□□ -1.09
YBX3-215ENST00000544504 NBEAL1Q6ZS30 2694 aa8.23□□□□□ -1.09
YBX3-215ENST00000544504 COL6A5A8TX70 2615 aa8.22□□□□□ -1.09
YBX3-215ENST00000544504 IGHV1-18A0A0C4DH31 117 aa8.22□□□□□ -1.09
YBX3-215ENST00000544504 TRBV5-5A0A0J9YX44 114 aa8.22□□□□□ -1.09
YBX3-215ENST00000544504 A0A1W2PR80 420 aa8.22□□□□□ -1.09
YBX3-215ENST00000544504 VSTM5A8MXK1 200 aa8.22□□□□□ -1.09
YBX3-215ENST00000544504 M0R1B8 84 aa8.22□□□□□ -1.09
YBX3-215ENST00000544504 SC5DO75845 299 aa8.22□□□□□ -1.09
YBX3-215ENST00000544504 DHRS3O75911 302 aa8.22□□□□□ -1.09
YBX3-215ENST00000544504 UCHL1P09936 223 aa8.22□□□□□ -1.09
YBX3-215ENST00000544504 CECR9P0C854 216 aa8.22□□□□□ -1.09
YBX3-215ENST00000544504 SLC2A1P11166 492 aa8.22□□□□□ -1.09
YBX3-215ENST00000544504 SELEP16581 610 aa8.22□□□□□ -1.09
YBX3-215ENST00000544504 DDOSTP39656 456 aa8.22□□□□□ -1.09
YBX3-215ENST00000544504 ZNF83P51522 516 aa8.22□□□□□ -1.09
YBX3-215ENST00000544504 PSMD7P51665 324 aa8.22□□□□□ -1.09
YBX3-215ENST00000544504 FABP5Q01469 135 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms