RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 APOL4Q9BPW4 351 aa16.21■□□□□ 0.19
DDX55-211ENST00000544429 TTTY10Q9BZA0 68 aa16.21■□□□□ 0.19
DDX55-211ENST00000544429 BPESC1Q9GZL8 116 aa16.21■□□□□ 0.19
DDX55-211ENST00000544429 OR10A2Q9H208 303 aa16.21■□□□□ 0.19
DDX55-211ENST00000544429 IL19Q9UHD0 177 aa16.21■□□□□ 0.19
DDX55-211ENST00000544429 IGHV1-69-2A0A0G2JMI3 117 aa16.2■□□□□ 0.18
DDX55-211ENST00000544429 A0A0U1RQV5 110 aa16.2■□□□□ 0.18
DDX55-211ENST00000544429 SNTNA6NMZ2 147 aa16.2■□□□□ 0.18
DDX55-211ENST00000544429 H0YAE9 185 aa16.2■□□□□ 0.18
DDX55-211ENST00000544429 MAGEB4O15481 346 aaPredicted RBP16.2■□□□□ 0.18
DDX55-211ENST00000544429 CLIC3O95833 236 aa16.2■□□□□ 0.18
DDX55-211ENST00000544429 PNPP00491 289 aa16.2■□□□□ 0.18
DDX55-211ENST00000544429 TACSTD2P09758 323 aa16.2■□□□□ 0.18
DDX55-211ENST00000544429 CFL1P23528 166 aaKnown RBP16.2■□□□□ 0.18
DDX55-211ENST00000544429 DDOSTP39656 456 aa16.2■□□□□ 0.18
DDX55-211ENST00000544429 RIDAP52758 137 aaKnown RBP16.2■□□□□ 0.18
DDX55-211ENST00000544429 TMEM33P57088 247 aa16.2■□□□□ 0.18
DDX55-211ENST00000544429 TNFAIP6P98066 277 aaPredicted RBP16.2■□□□□ 0.18
DDX55-211ENST00000544429 ZNF85Q03923 595 aa16.2■□□□□ 0.18
DDX55-211ENST00000544429 KRT74Q7RTS7 529 aa16.2■□□□□ 0.18
DDX55-211ENST00000544429 BIVMQ86UB2 503 aa16.2■□□□□ 0.18
DDX55-211ENST00000544429 DHRSXQ8N5I4 330 aa16.2■□□□□ 0.18
DDX55-211ENST00000544429 ZNF540Q8NDQ6 660 aa16.2■□□□□ 0.18
DDX55-211ENST00000544429 BHLHE23Q8NDY6 225 aa16.2■□□□□ 0.18
DDX55-211ENST00000544429 RNF166Q96A37 237 aaPredicted RBP16.2■□□□□ 0.18
DDX55-211ENST00000544429 LGALS12Q96DT0 336 aa16.2■□□□□ 0.18
DDX55-211ENST00000544429 LYZL4Q96KX0 146 aa16.2■□□□□ 0.18
DDX55-211ENST00000544429 ADI1Q9BV57 179 aa16.2■□□□□ 0.18
DDX55-211ENST00000544429 ZNF275Q9NSD4 429 aaPredicted RBP16.2■□□□□ 0.18
DDX55-211ENST00000544429 DECR2Q9NUI1 292 aa16.2■□□□□ 0.18
DDX55-211ENST00000544429 MRPL15Q9P015 296 aaKnown RBP16.2■□□□□ 0.18
DDX55-211ENST00000544429 NUFIP1Q9UHK0 495 aaKnown RBP16.2■□□□□ 0.18
DDX55-211ENST00000544429 ZNF391Q9UJN7 358 aa16.2■□□□□ 0.18
DDX55-211ENST00000544429 CACNG2Q9Y698 323 aa16.2■□□□□ 0.18
DDX55-211ENST00000544429 ABCA2Q9BZC7 2435 aa16.19■□□□□ 0.18
DDX55-211ENST00000544429 TMEM269A0A1B0GVZ9 245 aa16.19■□□□□ 0.18
DDX55-211ENST00000544429 H0YJX3 145 aa16.19■□□□□ 0.18
DDX55-211ENST00000544429 H0YL77 283 aa16.19■□□□□ 0.18
DDX55-211ENST00000544429 TBX1O43435 398 aa16.19■□□□□ 0.18
DDX55-211ENST00000544429 SULT1C4O75897 302 aa16.19■□□□□ 0.18
DDX55-211ENST00000544429 MFGE8Q08431 387 aaPredicted RBP16.19■□□□□ 0.18
DDX55-211ENST00000544429 IL18R1Q13478 541 aa16.19■□□□□ 0.18
DDX55-211ENST00000544429 RIPK1Q13546 671 aa16.19■□□□□ 0.18
DDX55-211ENST00000544429 TIGD6Q17RP2 521 aa16.19■□□□□ 0.18
DDX55-211ENST00000544429 OR10H4Q8NGA5 316 aa16.19■□□□□ 0.18
DDX55-211ENST00000544429 OR56B2PQ8NGI1 322 aa16.19■□□□□ 0.18
DDX55-211ENST00000544429 PGAM5Q96HS1 289 aa16.19■□□□□ 0.18
DDX55-211ENST00000544429 TBX5Q99593 518 aa16.19■□□□□ 0.18
DDX55-211ENST00000544429 SMR3AQ99954 134 aa16.19■□□□□ 0.18
DDX55-211ENST00000544429 ZNF649Q9BS31 505 aa16.19■□□□□ 0.18
DDX55-211ENST00000544429 EGLN1Q9GZT9 426 aa16.19■□□□□ 0.18
DDX55-211ENST00000544429 BRD7Q9NPI1 651 aa16.19■□□□□ 0.18
DDX55-211ENST00000544429 G6PC2Q9NQR9 355 aa16.19■□□□□ 0.18
DDX55-211ENST00000544429 TMEM100Q9NV29 134 aa16.19■□□□□ 0.18
DDX55-211ENST00000544429 IKZF2Q9UKS7 526 aa16.19■□□□□ 0.18
DDX55-211ENST00000544429 N6AMT1Q9Y5N5 214 aa16.19■□□□□ 0.18
DDX55-211ENST00000544429 IGHV4-61A0A0C4DH41 118 aa16.18■□□□□ 0.18
DDX55-211ENST00000544429 PTBP3O95758 552 aaKnown RBP16.18■□□□□ 0.18
DDX55-211ENST00000544429 IGHA1P01876 353 aa16.18■□□□□ 0.18
DDX55-211ENST00000544429 GNAO1P09471 354 aa16.18■□□□□ 0.18
DDX55-211ENST00000544429 USF1P22415 310 aaPredicted RBP16.18■□□□□ 0.18
DDX55-211ENST00000544429 TNFSF4P23510 183 aa16.18■□□□□ 0.18
DDX55-211ENST00000544429 CAPGP40121 348 aa16.18■□□□□ 0.18
DDX55-211ENST00000544429 GSK3AP49840 483 aa16.18■□□□□ 0.18
DDX55-211ENST00000544429 ACTC1P68032 377 aa16.18■□□□□ 0.18
DDX55-211ENST00000544429 ACTA1P68133 377 aa16.18■□□□□ 0.18
DDX55-211ENST00000544429 ZNF829Q3KNS6 432 aaPredicted RBP16.18■□□□□ 0.18
DDX55-211ENST00000544429 MAPK1IP1LQ8NDC0 245 aa16.18■□□□□ 0.18
DDX55-211ENST00000544429 OR10AD1Q8NGE0 317 aa16.18■□□□□ 0.18
DDX55-211ENST00000544429 FBLIM1Q8WUP2 373 aa16.18■□□□□ 0.18
DDX55-211ENST00000544429 SPRYD4Q8WW59 207 aaPredicted RBP16.18■□□□□ 0.18
DDX55-211ENST00000544429 CYGBQ8WWM9 190 aa16.18■□□□□ 0.18
DDX55-211ENST00000544429 ITFG2Q969R8 447 aa16.18■□□□□ 0.18
DDX55-211ENST00000544429 OR2V2Q96R30 315 aa16.18■□□□□ 0.18
DDX55-211ENST00000544429 PBOV1Q9GZY1 135 aa16.18■□□□□ 0.18
DDX55-211ENST00000544429 SLC22A4Q9H015 551 aa16.18■□□□□ 0.18
DDX55-211ENST00000544429 MOB1AQ9H8S9 216 aa16.18■□□□□ 0.18
DDX55-211ENST00000544429 PCDHGB1Q9Y5G3 927 aa16.18■□□□□ 0.18
DDX55-211ENST00000544429 R4GMQ9 66 aa16.18■□□□□ 0.18
DDX55-211ENST00000544429 HSPE1-MOB4S4R3N1 261 aa16.18■□□□□ 0.18
DDX55-211ENST00000544429 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.17■□□□□ 0.183e-7■■■■■ 29.7
DDX55-211ENST00000544429 GGT3PA6NGU5 568 aa16.17■□□□□ 0.18
DDX55-211ENST00000544429 METTL15A6NJ78 407 aa16.17■□□□□ 0.18
DDX55-211ENST00000544429 SMAD7O15105 426 aaKnown RBP16.17■□□□□ 0.18
DDX55-211ENST00000544429 CDC14BO60729 498 aa16.17■□□□□ 0.18
DDX55-211ENST00000544429 TTRP02766 147 aa16.17■□□□□ 0.18
DDX55-211ENST00000544429 HLA-DPB1P04440 258 aa16.17■□□□□ 0.18
DDX55-211ENST00000544429 TNFRSF1AP19438 455 aa16.17■□□□□ 0.18
DDX55-211ENST00000544429 ACKR3P25106 362 aa16.17■□□□□ 0.18
DDX55-211ENST00000544429 ATP6V1E1P36543 226 aa16.17■□□□□ 0.18
DDX55-211ENST00000544429 CD200P41217 278 aa16.17■□□□□ 0.18
DDX55-211ENST00000544429 GATA4P43694 442 aa16.17■□□□□ 0.18
DDX55-211ENST00000544429 RAB40BQ12829 278 aa16.17■□□□□ 0.18
DDX55-211ENST00000544429 MAB21L1Q13394 359 aa16.17■□□□□ 0.18
DDX55-211ENST00000544429 CARTPTQ16568 116 aa16.17■□□□□ 0.18
DDX55-211ENST00000544429 SMN1Q16637 294 aaKnown RBP16.17■□□□□ 0.18
DDX55-211ENST00000544429 CDONQ4KMG0 1287 aa16.17■□□□□ 0.18
DDX55-211ENST00000544429 LIPNQ5VXI9 398 aa16.17■□□□□ 0.18
DDX55-211ENST00000544429 Q6ZSR3 168 aa16.17■□□□□ 0.18
DDX55-211ENST00000544429 KLBQ86Z14 1044 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms