RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 PPP1R14AQ96A00 147 aa5.4□□□□□ -1.54
LTBR-212ENST00000543542 SGK3Q96BR1 496 aa5.4□□□□□ -1.54
LTBR-212ENST00000543542 MBD6Q96DN6 1003 aa5.4□□□□□ -1.54
LTBR-212ENST00000543542 ELMOD3Q96FG2 381 aa5.4□□□□□ -1.54
LTBR-212ENST00000543542 SORCS2Q96PQ0 1159 aa5.4□□□□□ -1.54
LTBR-212ENST00000543542 DIRC2Q96SL1 478 aa5.4□□□□□ -1.54
LTBR-212ENST00000543542 RHNO1Q9BSD3 238 aa5.4□□□□□ -1.54
LTBR-212ENST00000543542 EGLN1Q9GZT9 426 aa5.4□□□□□ -1.54
LTBR-212ENST00000543542 COMMD4Q9H0A8 199 aa5.4□□□□□ -1.54
LTBR-212ENST00000543542 RGCCQ9H4X1 137 aa5.4□□□□□ -1.54
LTBR-212ENST00000543542 PLEKHA1Q9HB21 404 aa5.4□□□□□ -1.54
LTBR-212ENST00000543542 MSL2Q9HCI7 577 aa5.4□□□□□ -1.54
LTBR-212ENST00000543542 GPR84Q9NQS5 396 aa5.4□□□□□ -1.54
LTBR-212ENST00000543542 PLCXD1Q9NUJ7 323 aa5.4□□□□□ -1.54
LTBR-212ENST00000543542 MRPS18AQ9NVS2 196 aaKnown RBP5.4□□□□□ -1.54
LTBR-212ENST00000543542 FAM206AQ9NX38 181 aa5.4□□□□□ -1.54
LTBR-212ENST00000543542 NKIRAS2Q9NYR9 191 aa5.4□□□□□ -1.54
LTBR-212ENST00000543542 NUFIP1Q9UHK0 495 aaKnown RBP5.4□□□□□ -1.54
LTBR-212ENST00000543542 PSORS1C1Q9UIG5 152 aa5.4□□□□□ -1.54
LTBR-212ENST00000543542 ZNF391Q9UJN7 358 aa5.4□□□□□ -1.54
LTBR-212ENST00000543542 ZDHHC8Q9ULC8 765 aa5.4□□□□□ -1.54
LTBR-212ENST00000543542 DIMT1Q9UNQ2 313 aaKnown RBP5.4□□□□□ -1.54
LTBR-212ENST00000543542 ERGIC3Q9Y282 383 aa5.4□□□□□ -1.54
LTBR-212ENST00000543542 NOP16Q9Y3C1 178 aaKnown RBP5.4□□□□□ -1.54
LTBR-212ENST00000543542 CENPEQ02224 2701 aa5.4□□□□□ -1.55
LTBR-212ENST00000543542 NBPF19A0A087WUL8 3843 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 TRBV2A0A0J9YWF9 115 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 A0A0U1RQV5 110 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 C5orf63A6NC05 138 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 ZSCAN5BA6NJL1 495 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 CD300LBA8K4G0 201 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 IQCF6A8MYZ5 107 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 J3QRE1 110 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 OVOL3O00110 214 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 SYT7O43581 403 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 DENRO43583 198 aaKnown RBP5.39□□□□□ -1.55
LTBR-212ENST00000543542 RGS10O43665 173 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 NDUFS7O75251 213 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 PNPP00491 289 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 F12P00748 615 aaPredicted RBP5.39□□□□□ -1.55
LTBR-212ENST00000543542 IGHV1-46P01743 117 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 IGHV4-39P01824 125 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 TTRP02766 147 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 CDK1P06493 297 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 CCDC159P0C7I6 412 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 OCM2P0CE71 109 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 OCMP0CE72 109 aaPredicted RBP5.39□□□□□ -1.55
LTBR-212ENST00000543542 UBCP0CG48 685 aaKnown RBP5.39□□□□□ -1.55
LTBR-212ENST00000543542 LIMS3P0CW19 117 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 LIMS4P0CW20 117 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 DAOP14920 347 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 CA6P23280 308 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 DDOSTP39656 456 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 MAGEB1P43366 347 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 GSK3AP49840 483 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 PDLIM4P50479 330 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 MMP15P51511 669 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 EFNA4P52798 201 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 TNFAIP6P98066 277 aaPredicted RBP5.39□□□□□ -1.55
LTBR-212ENST00000543542 FAM3AP98173 230 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 MZT1Q08AG7 82 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 RIPPLY1Q0D2K3 151 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 ALKBH1Q13686 389 aaKnown RBP5.39□□□□□ -1.55
LTBR-212ENST00000543542 CLEC12BQ2HXU8 276 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 WDR38Q5JTN6 314 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 Q5PR19 223 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 OR2G6Q5TZ20 316 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 TMEM244Q5VVB8 128 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 CLEC2AQ6UVW9 174 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 KCTD8Q6ZWB6 473 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 DOK3Q7L591 496 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 PRSS45Q7RTY3 260 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 CATSPERDQ86XM0 798 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 KLBQ86Z14 1044 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 ELMOD2Q8IZ81 293 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 LRRC75A-AS1Q8N1F1 130 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 CSNK2A3Q8NEV1 391 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 SEMA6DQ8NFY4 1073 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 OR10AD1Q8NGE0 317 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 OR56B2PQ8NGI1 322 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 OR8S1Q8NH09 359 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 HAVCR2Q8TDQ0 301 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 FBLIM1Q8WUP2 373 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 TSEN15Q8WW01 171 aaKnown RBP5.39□□□□□ -1.55
LTBR-212ENST00000543542 GATAD2BQ8WXI9 593 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 PIGCQ92535 297 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 GTF3AQ92664 365 aaKnown RBP5.39□□□□□ -1.55
LTBR-212ENST00000543542 RORBQ92753 470 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 PELI1Q96FA3 418 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 HIST1H2AAQ96QV6 131 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 ADAT1Q9BUB4 502 aaKnown RBP5.39□□□□□ -1.55
LTBR-212ENST00000543542 REPIN1Q9BWE0 567 aaKnown RBP5.39□□□□□ -1.55
LTBR-212ENST00000543542 PAPOLGQ9BWT3 736 aaKnown RBP5.39□□□□□ -1.55
LTBR-212ENST00000543542 MND1Q9BWT6 205 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 GSX2Q9BZM3 304 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 SLC22A4Q9H015 551 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 ISG20L2Q9H9L3 353 aaKnown RBP5.39□□□□□ -1.55
LTBR-212ENST00000543542 SAP30LQ9HAJ7 183 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 TRIM36Q9NQ86 728 aa5.39□□□□□ -1.55
LTBR-212ENST00000543542 ZNF701Q9NV72 531 aaPredicted RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms