RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 OR52L1Q8NGH7 329 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 OR5K1Q8NHB7 308 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 GCDHQ92947 438 aaPredicted RBP4.45□□□□□ -1.7
CLIP1-217ENST00000543205 MARS2Q96GW9 593 aaKnown RBP4.45□□□□□ -1.7
CLIP1-217ENST00000543205 CENPNQ96H22 339 aaPredicted RBP4.45□□□□□ -1.7
CLIP1-217ENST00000543205 SLC25A44Q96H78 314 aaPredicted RBP4.45□□□□□ -1.7
CLIP1-217ENST00000543205 FEVQ99581 238 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 IFT27Q9BW83 186 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 DGCR6LQ9BY27 220 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 LINC00470Q9BZP3 86 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 SEMA6AQ9H2E6 1030 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 OR52D1Q9H346 318 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 TXNIPQ9H3M7 391 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 NTN4Q9HB63 628 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 TMEM165Q9HC07 324 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 S100A14Q9HCY8 104 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 SLC7A10Q9NS82 523 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 SLCO1C1Q9NYB5 712 aa4.45□□□□□ -1.7
CLIP1-217ENST00000543205 PLEKHB1Q9UF11 243 aaPredicted RBP4.45□□□□□ -1.7
CLIP1-217ENST00000543205 ZNF346Q9UL40 294 aaKnown RBP4.45□□□□□ -1.7
CLIP1-217ENST00000543205 DIDO1Q9BTC0 2240 aaKnown RBP4.44□□□□□ -1.7
CLIP1-217ENST00000543205 FBN2P35556 2912 aa4.44□□□□□ -1.7
CLIP1-217ENST00000543205 A0A0U1RRA0 63 aa4.44□□□□□ -1.7
CLIP1-217ENST00000543205 CIB4A0PJX0 185 aa4.44□□□□□ -1.7
CLIP1-217ENST00000543205 FAM90A10PA6NDY2 464 aa4.44□□□□□ -1.7
CLIP1-217ENST00000543205 TUBAL3A6NHL2 446 aa4.44□□□□□ -1.7
CLIP1-217ENST00000543205 A6NIZ1 184 aa4.44□□□□□ -1.7
CLIP1-217ENST00000543205 CENPBD1B2RD01 187 aa4.44□□□□□ -1.7
CLIP1-217ENST00000543205 H3BNX3 289 aa4.44□□□□□ -1.7
CLIP1-217ENST00000543205 XKRYO14609 159 aa4.44□□□□□ -1.7
CLIP1-217ENST00000543205 LYZL6O75951 148 aa4.44□□□□□ -1.7
CLIP1-217ENST00000543205 IGHMP01871 453 aa4.44□□□□□ -1.7
CLIP1-217ENST00000543205 CD14P08571 375 aa4.44□□□□□ -1.7
CLIP1-217ENST00000543205 NR2C1P13056 603 aa4.44□□□□□ -1.7
CLIP1-217ENST00000543205 COX6B1P14854 86 aa4.44□□□□□ -1.7
CLIP1-217ENST00000543205 ACADSP16219 412 aa4.44□□□□□ -1.7
CLIP1-217ENST00000543205 PPP3CBP16298 524 aa4.44□□□□□ -1.7
CLIP1-217ENST00000543205 IGHV1-2P23083 117 aa4.44□□□□□ -1.7
CLIP1-217ENST00000543205 MPGP29372 298 aa4.44□□□□□ -1.7
CLIP1-217ENST00000543205 PCYT1AP49585 367 aa4.44□□□□□ -1.7
CLIP1-217ENST00000543205 ENTPD1P49961 510 aa4.44□□□□□ -1.7
CLIP1-217ENST00000543205 RAP1BP61224 184 aa4.44□□□□□ -1.7
CLIP1-217ENST00000543205 RAP1AP62834 184 aa4.44□□□□□ -1.7
CLIP1-217ENST00000543205 ADAM8P78325 824 aa4.44□□□□□ -1.7
CLIP1-217ENST00000543205 SORDQ00796 357 aa4.44□□□□□ -1.7
CLIP1-217ENST00000543205 ROR2Q01974 943 aaKnown RBP4.44□□□□□ -1.7
CLIP1-217ENST00000543205 TGFBR3Q03167 851 aa4.44□□□□□ -1.7
CLIP1-217ENST00000543205 LGALS3BPQ08380 585 aa4.44□□□□□ -1.7
CLIP1-217ENST00000543205 C9orf135Q5VTT2 229 aa4.44□□□□□ -1.7
CLIP1-217ENST00000543205 STAC2Q6ZMT1 411 aa4.44□□□□□ -1.7
CLIP1-217ENST00000543205 ZNF620Q6ZNG0 422 aa4.44□□□□□ -1.7
CLIP1-217ENST00000543205 RASSF6Q6ZTQ3 369 aa4.44□□□□□ -1.7
CLIP1-217ENST00000543205 ZNF771Q7L3S4 317 aaPredicted RBP4.44□□□□□ -1.7
CLIP1-217ENST00000543205 BHLHA15Q7RTS1 189 aaPredicted RBP4.44□□□□□ -1.7
CLIP1-217ENST00000543205 MED12LQ86YW9 2145 aa4.44□□□□□ -1.7
CLIP1-217ENST00000543205 HS3ST5Q8IZT8 346 aa4.44□□□□□ -1.7
CLIP1-217ENST00000543205 TMEM123Q8N131 208 aa4.44□□□□□ -1.7
CLIP1-217ENST00000543205 GABRG1Q8N1C3 465 aa4.44□□□□□ -1.7
CLIP1-217ENST00000543205 SVOPLQ8N434 492 aa4.44□□□□□ -1.7
CLIP1-217ENST00000543205 SYT8Q8NBV8 401 aa4.44□□□□□ -1.7
CLIP1-217ENST00000543205 ICA1LQ8NDH6 482 aa4.44□□□□□ -1.7
CLIP1-217ENST00000543205 ASB10Q8WXI3 467 aa4.44□□□□□ -1.7
CLIP1-217ENST00000543205 ST8SIA2Q92186 375 aa4.44□□□□□ -1.7
CLIP1-217ENST00000543205 ZNF570Q96NI8 536 aa4.44□□□□□ -1.7
CLIP1-217ENST00000543205 ALKBH3Q96Q83 286 aaPredicted RBP4.44□□□□□ -1.7
CLIP1-217ENST00000543205 FYTTD1Q96QD9 318 aaKnown RBP4.44□□□□□ -1.7
CLIP1-217ENST00000543205 TSPAN32Q96QS1 320 aa4.44□□□□□ -1.7
CLIP1-217ENST00000543205 NIPSNAP1Q9BPW8 284 aa4.44□□□□□ -1.7
CLIP1-217ENST00000543205 MED18Q9BUE0 208 aa4.44□□□□□ -1.7
CLIP1-217ENST00000543205 ULBP2Q9BZM5 246 aa4.44□□□□□ -1.7
CLIP1-217ENST00000543205 MAGT1Q9H0U3 335 aa4.44□□□□□ -1.7
CLIP1-217ENST00000543205 EGLN3Q9H6Z9 239 aa4.44□□□□□ -1.7
CLIP1-217ENST00000543205 MED20Q9H944 212 aa4.44□□□□□ -1.7
CLIP1-217ENST00000543205 RDH8Q9NYR8 311 aa4.44□□□□□ -1.7
CLIP1-217ENST00000543205 TAS2R16Q9NYV7 291 aa4.44□□□□□ -1.7
CLIP1-217ENST00000543205 GLTPQ9NZD2 209 aa4.44□□□□□ -1.7
CLIP1-217ENST00000543205 NKX1-2Q9UD57 310 aaPredicted RBP4.44□□□□□ -1.7
CLIP1-217ENST00000543205 NDRG3Q9UGV2 375 aa4.44□□□□□ -1.7
CLIP1-217ENST00000543205 IER3IP1Q9Y5U9 82 aa4.44□□□□□ -1.7
CLIP1-217ENST00000543205 CDH10Q9Y6N8 788 aa4.44□□□□□ -1.7
CLIP1-217ENST00000543205 RELNP78509 3460 aa4.44□□□□□ -1.7
CLIP1-217ENST00000543205 MPDZO75970 2070 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 H3BN98 237 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 RPL36A-HNRNPH2H7BZ11 118 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 IMPA2O14732 288 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 CASKO14936 926 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 ARHGEF9O43307 516 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 SPRY2O43597 315 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 TRMUO75648 421 aaKnown RBP4.43□□□□□ -1.7
CLIP1-217ENST00000543205 RAD51DO75771 328 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 PPP1R3DO95685 299 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 PGA4P0DJD7 388 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 PGA3P0DJD8 388 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 APEHP13798 732 aaKnown RBP4.43□□□□□ -1.7
CLIP1-217ENST00000543205 ZNF26P17031 533 aaPredicted RBP4.43□□□□□ -1.7
CLIP1-217ENST00000543205 PSMB1P20618 241 aaKnown RBP4.43□□□□□ -1.7
CLIP1-217ENST00000543205 PAICSP22234 425 aaKnown RBP4.43□□□□□ -1.7
CLIP1-217ENST00000543205 PPIFP30405 207 aaKnown RBP4.43□□□□□ -1.7
CLIP1-217ENST00000543205 GABRA5P31644 462 aa4.43□□□□□ -1.7
CLIP1-217ENST00000543205 HAAOP46952 286 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms