RNA–Protein interactions for RNA: ENST00000542663.1

CLSTN3-214, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-214ENST00000542663 NOP16Q9Y3C1 178 aaKnown RBP14.61□□□□□ -0.07
CLSTN3-214ENST00000542663 COL7A1Q02388 2944 aa14.6□□□□□ -0.07
CLSTN3-214ENST00000542663 BTBD17A6NE02 478 aa14.6□□□□□ -0.07
CLSTN3-214ENST00000542663 GPR37O15354 613 aa14.6□□□□□ -0.07
CLSTN3-214ENST00000542663 GRPP07492 148 aa14.6□□□□□ -0.07
CLSTN3-214ENST00000542663 KLF10Q13118 480 aa14.6□□□□□ -0.07
CLSTN3-214ENST00000542663 HERPUD1Q15011 391 aa14.6□□□□□ -0.07
CLSTN3-214ENST00000542663 REC114Q7Z4M0 266 aa14.6□□□□□ -0.07
CLSTN3-214ENST00000542663 GALNT4Q8N4A0 578 aa14.6□□□□□ -0.07
CLSTN3-214ENST00000542663 Q8N7P7 452 aa14.6□□□□□ -0.07
CLSTN3-214ENST00000542663 HSH2DQ96JZ2 352 aa14.6□□□□□ -0.07
CLSTN3-214ENST00000542663 NMNAT3Q96T66 252 aa14.6□□□□□ -0.07
CLSTN3-214ENST00000542663 SIKE1Q9BRV8 207 aa14.6□□□□□ -0.07
CLSTN3-214ENST00000542663 TMEM120AQ9BXJ8 343 aa14.6□□□□□ -0.07
CLSTN3-214ENST00000542663 MRPL15Q9P015 296 aaKnown RBP14.6□□□□□ -0.07
CLSTN3-214ENST00000542663 SIGLEC9Q9Y336 463 aa14.6□□□□□ -0.07
CLSTN3-214ENST00000542663 CAB39Q9Y376 341 aaPredicted RBP14.6□□□□□ -0.07
CLSTN3-214ENST00000542663 RYR3Q15413 4870 aa14.6□□□□□ -0.07
CLSTN3-214ENST00000542663 A0A1W2PRD5 423 aa14.59□□□□□ -0.07
CLSTN3-214ENST00000542663 A0A1W2PRF3 423 aa14.59□□□□□ -0.07
CLSTN3-214ENST00000542663 A0A1W2PRM7 423 aa14.59□□□□□ -0.07
CLSTN3-214ENST00000542663 M0R135 149 aa14.59□□□□□ -0.07
CLSTN3-214ENST00000542663 NPFFO15130 113 aa14.59□□□□□ -0.07
CLSTN3-214ENST00000542663 EFNB2P52799 333 aa14.59□□□□□ -0.07
CLSTN3-214ENST00000542663 TPTEP56180 551 aa14.59□□□□□ -0.07
CLSTN3-214ENST00000542663 KLRD1Q13241 179 aa14.59□□□□□ -0.07
CLSTN3-214ENST00000542663 SEC23BQ15437 767 aa14.59□□□□□ -0.07
CLSTN3-214ENST00000542663 PCK2Q16822 640 aa14.59□□□□□ -0.07
CLSTN3-214ENST00000542663 RFX4Q33E94 735 aa14.59□□□□□ -0.07
CLSTN3-214ENST00000542663 GLYATL3Q5SZD4 288 aa14.59□□□□□ -0.07
CLSTN3-214ENST00000542663 Q6ZTK2 550 aa14.59□□□□□ -0.07
CLSTN3-214ENST00000542663 ZBTB46Q86UZ6 589 aa14.59□□□□□ -0.07
CLSTN3-214ENST00000542663 C11orf53Q8IXP5 236 aa14.59□□□□□ -0.07
CLSTN3-214ENST00000542663 PNKDQ8N490 385 aa14.59□□□□□ -0.07
CLSTN3-214ENST00000542663 OR2AJ1Q8NGZ0 328 aa14.59□□□□□ -0.07
CLSTN3-214ENST00000542663 PPP1R35Q8TAP8 253 aa14.59□□□□□ -0.07
CLSTN3-214ENST00000542663 CFHR4Q92496 578 aa14.59□□□□□ -0.07
CLSTN3-214ENST00000542663 ZNF799Q96GE5 643 aa14.59□□□□□ -0.07
CLSTN3-214ENST00000542663 ERMAPQ96PL5 475 aaPredicted RBP14.59□□□□□ -0.07
CLSTN3-214ENST00000542663 CCL13Q99616 98 aa14.59□□□□□ -0.07
CLSTN3-214ENST00000542663 PPA2Q9H2U2 334 aa14.59□□□□□ -0.07
CLSTN3-214ENST00000542663 RPRD1BQ9NQG5 326 aaKnown RBP14.59□□□□□ -0.07
CLSTN3-214ENST00000542663 MRPL22Q9NWU5 206 aaKnown RBP14.59□□□□□ -0.07
CLSTN3-214ENST00000542663 DNAJB11Q9UBS4 358 aa14.59□□□□□ -0.07
CLSTN3-214ENST00000542663 FOXJ3Q9UPW0 622 aa14.59□□□□□ -0.07
CLSTN3-214ENST00000542663 AURKCQ9UQB9 309 aa14.59□□□□□ -0.07
CLSTN3-214ENST00000542663 ENPP4Q9Y6X5 453 aa14.59□□□□□ -0.07
CLSTN3-214ENST00000542663 LOC100653049A0A140TA62 436 aa14.58□□□□□ -0.08
CLSTN3-214ENST00000542663 hCG_1807616A0A1W2PRN6 198 aa14.58□□□□□ -0.08
CLSTN3-214ENST00000542663 A0A1W2PRQ8 180 aa14.58□□□□□ -0.08
CLSTN3-214ENST00000542663 GGT3PA6NGU5 568 aa14.58□□□□□ -0.08
CLSTN3-214ENST00000542663 UNC119BA6NIH7 251 aa14.58□□□□□ -0.08
CLSTN3-214ENST00000542663 A6NLC8 198 aa14.58□□□□□ -0.08
CLSTN3-214ENST00000542663 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.58□□□□□ -0.08
CLSTN3-214ENST00000542663 CXCR6O00574 342 aa14.58□□□□□ -0.08
CLSTN3-214ENST00000542663 KRT34O76011 436 aa14.58□□□□□ -0.08
CLSTN3-214ENST00000542663 GABRA5P31644 462 aa14.58□□□□□ -0.08
CLSTN3-214ENST00000542663 OTX1P32242 354 aaPredicted RBP14.58□□□□□ -0.08
CLSTN3-214ENST00000542663 DGCR6Q14129 220 aa14.58□□□□□ -0.08
CLSTN3-214ENST00000542663 SMARCD3Q6STE5 483 aa14.58□□□□□ -0.08
CLSTN3-214ENST00000542663 FKBP9P1Q75LS8 142 aa14.58□□□□□ -0.08
CLSTN3-214ENST00000542663 WDR86Q86TI4 376 aa14.58□□□□□ -0.08
CLSTN3-214ENST00000542663 FAM216BQ8N7L0 139 aa14.58□□□□□ -0.08
CLSTN3-214ENST00000542663 C11orf44Q8N8P7 122 aa14.58□□□□□ -0.08
CLSTN3-214ENST00000542663 TNFRSF14Q92956 283 aa14.58□□□□□ -0.08
CLSTN3-214ENST00000542663 DMRTB1Q96MA1 342 aa14.58□□□□□ -0.08
CLSTN3-214ENST00000542663 FN3KQ9H479 309 aa14.58□□□□□ -0.08
CLSTN3-214ENST00000542663 GID8Q9NWU2 228 aa14.58□□□□□ -0.08
CLSTN3-214ENST00000542663 NOTCH3Q9UM47 2321 aa14.57□□□□□ -0.08
CLSTN3-214ENST00000542663 TRBV4-1A0A0J9YWV2 114 aa14.57□□□□□ -0.08
CLSTN3-214ENST00000542663 ANKRD61A6NGH8 418 aa14.57□□□□□ -0.08
CLSTN3-214ENST00000542663 BHLHE40O14503 412 aa14.57□□□□□ -0.08
CLSTN3-214ENST00000542663 SERPINA1P01009 418 aa14.57□□□□□ -0.08
CLSTN3-214ENST00000542663 H1F0P07305 194 aaKnown RBP14.57□□□□□ -0.08
CLSTN3-214ENST00000542663 PSKH1P11801 424 aa14.57□□□□□ -0.08
CLSTN3-214ENST00000542663 HIST1H1CP16403 213 aaKnown RBP14.57□□□□□ -0.08
CLSTN3-214ENST00000542663 SAA4P35542 130 aa14.57□□□□□ -0.08
CLSTN3-214ENST00000542663 RPS27P42677 84 aaKnown RBP14.57□□□□□ -0.08
CLSTN3-214ENST00000542663 GUCA2AQ02747 115 aa14.57□□□□□ -0.08
CLSTN3-214ENST00000542663 SLC36A3Q495N2 470 aa14.57□□□□□ -0.08
CLSTN3-214ENST00000542663 FGD3Q5JSP0 725 aa14.57□□□□□ -0.08
CLSTN3-214ENST00000542663 WDR38Q5JTN6 314 aa14.57□□□□□ -0.08
CLSTN3-214ENST00000542663 C1orf122Q6ZSJ8 110 aa14.57□□□□□ -0.08
CLSTN3-214ENST00000542663 SLC15A3Q8IY34 581 aa14.57□□□□□ -0.08
CLSTN3-214ENST00000542663 SPERTQ8NA61 448 aa14.57□□□□□ -0.08
CLSTN3-214ENST00000542663 OR56B2PQ8NGI1 322 aa14.57□□□□□ -0.08
CLSTN3-214ENST00000542663 OR4K13Q8NH42 304 aa14.57□□□□□ -0.08
CLSTN3-214ENST00000542663 OR5R1Q8NH85 324 aa14.57□□□□□ -0.08
CLSTN3-214ENST00000542663 MRAPQ8TCY5 172 aa14.57□□□□□ -0.08
CLSTN3-214ENST00000542663 LRRC29Q8WV35 223 aa14.57□□□□□ -0.08
CLSTN3-214ENST00000542663 SEH1LQ96EE3 360 aa14.57□□□□□ -0.08
CLSTN3-214ENST00000542663 SAR1AQ9NR31 198 aa14.57□□□□□ -0.08
CLSTN3-214ENST00000542663 PRPF19Q9UMS4 504 aaKnown RBP14.57□□□□□ -0.08
CLSTN3-214ENST00000542663 OR6C68A6NDL8 312 aa14.56□□□□□ -0.08
CLSTN3-214ENST00000542663 ARPC3O15145 178 aa14.56□□□□□ -0.08
CLSTN3-214ENST00000542663 RENP00797 406 aa14.56□□□□□ -0.08
CLSTN3-214ENST00000542663 MUC1P15941 1255 aaPredicted RBP14.56□□□□□ -0.08
CLSTN3-214ENST00000542663 AMY2BP19961 511 aa14.56□□□□□ -0.08
CLSTN3-214ENST00000542663 EEF1B2P24534 225 aaKnown RBP14.56□□□□□ -0.08
CLSTN3-214ENST00000542663 LIPEQ05469 1076 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 147.1 ms