RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 SLAMF6Q96DU3 332 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 ADAT3Q96EY9 351 aaPredicted RBP4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 C1orf147Q96MC9 270 aaPredicted RBP4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 PBOV1Q9GZY1 135 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 CST11Q9H112 138 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 DUSP15Q9H1R2 295 aaPredicted RBP4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 MOB1AQ9H8S9 216 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 ZMAT3Q9HA38 289 aaKnown RBP4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 FN3KRPQ9HA64 309 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 SERINC1Q9NRX5 453 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 MED29Q9NX70 200 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 COQ3Q9NZJ6 369 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 FREM3P0C091 2139 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 ZNF318Q5VUA4 2279 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 A0A1B0GW55 424 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 OR2AT4A6NND4 320 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 F8VVB4 439 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 F8VWA3 439 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 M0R296 226 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 SULT2B1O00204 365 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 SYT7O43581 403 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 STK17BO94768 372 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 DUS4LO95620 317 aaKnown RBP4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 WDPCPO95876 746 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 ONECUT2O95948 504 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 HLA-AP01891 365 aaKnown RBP4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 GP1BAP07359 652 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 ERCC1P07992 297 aaPredicted RBP4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 CHRM2P08172 466 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 DUX4L2P0CJ85 424 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 DUX4L3P0CJ86 424 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 DUX4L4P0CJ87 422 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 DUX4L5P0CJ88 424 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 DUX4L6P0CJ89 424 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 DUX4L7P0CJ90 424 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 PGA4P0DJD7 388 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 PGA3P0DJD8 388 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 SRFP11831 508 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 GLB1P16278 677 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 CCL1P22362 96 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 LAP3P28838 519 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 PTGDSP41222 190 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 PPM1FP49593 454 aaPredicted RBP4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 ATP1B3P54709 279 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 ZXDAP98168 799 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 POU3F1Q03052 451 aaPredicted RBP4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 FOXF1Q12946 379 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 EIF3IQ13347 325 aaKnown RBP4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 BTN1A1Q13410 526 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 KCNMB1Q16558 191 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 HYAL4Q2M3T9 481 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 SCGB2B2Q4G0G5 96 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 SLC22A6Q4U2R8 563 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 VAX1Q5SQQ9 334 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 THEM4Q5T1C6 240 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 RHBDD2Q6NTF9 364 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 C3orf33Q6P1S2 294 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 ARSKQ6UWY0 536 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 C16orf47Q6ZP98 133 aaPredicted RBP4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 HOGA1Q86XE5 327 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 PRSS58Q8IYP2 241 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 OR5AS1Q8N127 324 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 GVQW1Q8N7I0 195 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 RELL2Q8NC24 303 aaPredicted RBP4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 OR52H1Q8NGJ2 320 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 OR5D14Q8NGL3 314 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 OR10R2Q8NGX6 335 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 POC1BQ8TC44 478 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 STT3BQ8TCJ2 826 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 SSC4DQ8WTU2 575 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 PPP1R1CQ8WVI7 109 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 CMBLQ96DG6 245 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 ZC3H10Q96K80 434 aaKnown RBP4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 MRGPRX4Q96LA9 322 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 PHB2Q99623 299 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 VRK1Q99986 396 aaPredicted RBP4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 GAL3ST1Q99999 423 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 WDR77Q9BQA1 342 aaPredicted RBP4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 PHF7Q9BWX1 381 aaPredicted RBP4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 FOXQ1Q9C009 403 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 B3GNT4Q9C0J1 378 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 MS4A7Q9GZW8 240 aaPredicted RBP4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 LPAR5Q9H1C0 372 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 ZNF768Q9H5H4 540 aaKnown RBP4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 PTGES2Q9H7Z7 377 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 LMAN1LQ9HAT1 526 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 FGF21Q9NSA1 209 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 CENPMQ9NSP4 180 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 MYEF2Q9P2K5 600 aaKnown RBP4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 DUX4Q9UBX2 424 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 SRPK3Q9UPE1 567 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 FARSAQ9Y285 508 aaKnown RBP4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 RPH3AQ9Y2J0 694 aaPredicted RBP4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 KCNK7Q9Y2U2 307 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 NOP16Q9Y3C1 178 aaKnown RBP4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 LHFPL6Q9Y693 200 aa4.6□□□□□ -1.67
ATPAF1-212ENST00000542495 RP1P56715 2156 aa4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 A0A0A6YYD4 124 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms