RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 LILRA1O75019 489 aa14.27□□□□□ -0.13
UBC-208ENST00000540700 LALBAP00709 142 aa14.27□□□□□ -0.13
UBC-208ENST00000540700 MT-ND2P03891 347 aa14.27□□□□□ -0.13
UBC-208ENST00000540700 KRT8P05787 483 aa14.27□□□□□ -0.13
UBC-208ENST00000540700 SERPINF1P36955 418 aa14.27□□□□□ -0.13
UBC-208ENST00000540700 KIR3DL2P43630 455 aa14.27□□□□□ -0.13
UBC-208ENST00000540700 PTH2RP49190 550 aa14.27□□□□□ -0.13
UBC-208ENST00000540700 RGS6P49758 472 aa14.27□□□□□ -0.13
UBC-208ENST00000540700 NANOS3P60323 173 aaKnown RBP14.27□□□□□ -0.13
UBC-208ENST00000540700 PSG7Q13046 419 aa14.27□□□□□ -0.13
UBC-208ENST00000540700 GK2Q14410 553 aaPredicted RBP14.27□□□□□ -0.13
UBC-208ENST00000540700 IRF3Q14653 427 aa14.27□□□□□ -0.13
UBC-208ENST00000540700 RBM48Q5RL73 367 aaKnown RBP14.27□□□□□ -0.13
UBC-208ENST00000540700 MBNL2Q5VZF2 373 aaKnown RBP14.27□□□□□ -0.13
UBC-208ENST00000540700 XAF1Q6GPH4 301 aa14.27□□□□□ -0.13
UBC-208ENST00000540700 MUC15Q8N387 334 aa14.27□□□□□ -0.13
UBC-208ENST00000540700 STX19Q8N4C7 294 aa14.27□□□□□ -0.13
UBC-208ENST00000540700 SPRYD4Q8WW59 207 aaPredicted RBP14.27□□□□□ -0.13
UBC-208ENST00000540700 PBOV1Q9GZY1 135 aa14.27□□□□□ -0.13
UBC-208ENST00000540700 NIPAL2Q9H841 368 aa14.27□□□□□ -0.13
UBC-208ENST00000540700 EXOSC1Q9Y3B2 195 aaKnown RBP14.27□□□□□ -0.13
UBC-208ENST00000540700 CMAHPQ9Y471 501 aa14.27□□□□□ -0.13
UBC-208ENST00000540700 IRGMA1A4Y4 181 aa14.26□□□□□ -0.13
UBC-208ENST00000540700 J3QW42 95 aa14.26□□□□□ -0.13
UBC-208ENST00000540700 TBX1O43435 398 aa14.26□□□□□ -0.13
UBC-208ENST00000540700 IGLV3-1P01715 115 aa14.26□□□□□ -0.13
UBC-208ENST00000540700 MMP16P51512 607 aa14.26□□□□□ -0.13
UBC-208ENST00000540700 CSNK2BP67870 215 aa14.26□□□□□ -0.13
UBC-208ENST00000540700 TNK1Q13470 666 aa14.26□□□□□ -0.13
UBC-208ENST00000540700 MED21Q13503 144 aa14.26□□□□□ -0.13
UBC-208ENST00000540700 EFNB3Q15768 340 aa14.26□□□□□ -0.13
UBC-208ENST00000540700 WDR38Q5JTN6 314 aa14.26□□□□□ -0.13
UBC-208ENST00000540700 ARL9Q6T311 187 aa14.26□□□□□ -0.13
UBC-208ENST00000540700 FBXW12Q6X9E4 464 aa14.26□□□□□ -0.13
UBC-208ENST00000540700 CATSPERDQ86XM0 798 aa14.26□□□□□ -0.13
UBC-208ENST00000540700 SYS1Q8N2H4 156 aa14.26□□□□□ -0.13
UBC-208ENST00000540700 SPSB4Q96A44 273 aa14.26□□□□□ -0.13
UBC-208ENST00000540700 CMBLQ96DG6 245 aa14.26□□□□□ -0.13
UBC-208ENST00000540700 PGAM5Q96HS1 289 aa14.26□□□□□ -0.13
UBC-208ENST00000540700 PLK3Q9H4B4 646 aa14.26□□□□□ -0.13
UBC-208ENST00000540700 SCN3BQ9NY72 215 aa14.26□□□□□ -0.13
UBC-208ENST00000540700 OR52A1Q9UKL2 312 aa14.26□□□□□ -0.13
UBC-208ENST00000540700 LAMP3Q9UQV4 416 aa14.26□□□□□ -0.13
UBC-208ENST00000540700 SIRT4Q9Y6E7 314 aaPredicted RBP14.26□□□□□ -0.13
UBC-208ENST00000540700 PLCE1Q9P212 2302 aa14.26□□□□□ -0.13
UBC-208ENST00000540700 LOC110117498-PIK3R3F6TDL0 507 aa14.25□□□□□ -0.13
UBC-208ENST00000540700 TTRP02766 147 aa14.25□□□□□ -0.13
UBC-208ENST00000540700 ALDH3B1P43353 468 aa14.25□□□□□ -0.13
UBC-208ENST00000540700 GTF2A1P52655 376 aaPredicted RBP14.25□□□□□ -0.13
UBC-208ENST00000540700 RPS23P62266 143 aaKnown RBP14.25□□□□□ -0.13
UBC-208ENST00000540700 ACTA2P62736 377 aa14.25□□□□□ -0.13
UBC-208ENST00000540700 ACTG2P63267 376 aa14.25□□□□□ -0.13
UBC-208ENST00000540700 ZNF829Q3KNS6 432 aaPredicted RBP14.25□□□□□ -0.13
UBC-208ENST00000540700 OR2T2Q6IF00 324 aa14.25□□□□□ -0.13
UBC-208ENST00000540700 C20orf204Q6ZNR8 217 aa14.25□□□□□ -0.13
UBC-208ENST00000540700 FBXL14Q8N1E6 418 aa14.25□□□□□ -0.13
UBC-208ENST00000540700 MAPK1IP1LQ8NDC0 245 aa14.25□□□□□ -0.13
UBC-208ENST00000540700 SYNPRQ8TBG9 265 aa14.25□□□□□ -0.13
UBC-208ENST00000540700 GSX2Q9BZM3 304 aa14.25□□□□□ -0.13
UBC-208ENST00000540700 CBLN4Q9NTU7 201 aa14.25□□□□□ -0.13
UBC-208ENST00000540700 FRRS1LQ9P0K9 344 aa14.25□□□□□ -0.13
UBC-208ENST00000540700 NUFIP1Q9UHK0 495 aaKnown RBP14.25□□□□□ -0.13
UBC-208ENST00000540700 DUSP13Q9UII6 198 aa14.25□□□□□ -0.13
UBC-208ENST00000540700 LSM2Q9Y333 95 aaKnown RBP14.25□□□□□ -0.13
UBC-208ENST00000540700 CAB39Q9Y376 341 aaPredicted RBP14.25□□□□□ -0.13
UBC-208ENST00000540700 TPRKBQ9Y3C4 175 aa14.25□□□□□ -0.13
UBC-208ENST00000540700 hCG_38984A0A1B0GV85 526 aa14.24□□□□□ -0.13
UBC-208ENST00000540700 IGHV3-13P01766 116 aa14.24□□□□□ -0.13
UBC-208ENST00000540700 APOC1P02654 83 aa14.24□□□□□ -0.13
UBC-208ENST00000540700 MAP2K4P45985 399 aa14.24□□□□□ -0.13
UBC-208ENST00000540700 CDH15P55291 814 aa14.24□□□□□ -0.13
UBC-208ENST00000540700 FAM3AP98173 230 aa14.24□□□□□ -0.13
UBC-208ENST00000540700 KRTAP1-1Q07627 177 aa14.24□□□□□ -0.13
UBC-208ENST00000540700 GFOD2Q3B7J2 385 aa14.24□□□□□ -0.13
UBC-208ENST00000540700 ZNF718Q3SXZ3 478 aa14.24□□□□□ -0.13
UBC-208ENST00000540700 RNLSQ5VYX0 342 aa14.24□□□□□ -0.13
UBC-208ENST00000540700 FAM220AQ7Z4H9 259 aa14.24□□□□□ -0.13
UBC-208ENST00000540700 ZCCHC24Q8N2G6 241 aaKnown RBP14.24□□□□□ -0.13
UBC-208ENST00000540700 KLHL36Q8N4N3 616 aa14.24□□□□□ -0.13
UBC-208ENST00000540700 NANOGP1Q8N7R0 232 aa14.24□□□□□ -0.13
UBC-208ENST00000540700 OR2G2Q8NGZ5 317 aa14.24□□□□□ -0.13
UBC-208ENST00000540700 OR52N1Q8NH53 320 aa14.24□□□□□ -0.13
UBC-208ENST00000540700 GATAD2BQ8WXI9 593 aa14.24□□□□□ -0.13
UBC-208ENST00000540700 HAVCR1Q96D42 359 aa14.24□□□□□ -0.13
UBC-208ENST00000540700 REEP6Q96HR9 211 aa14.24□□□□□ -0.13
UBC-208ENST00000540700 CDCA4Q9BXL8 241 aa14.24□□□□□ -0.13
UBC-208ENST00000540700 OR10A2Q9H208 303 aa14.24□□□□□ -0.13
UBC-208ENST00000540700 PURGQ9UJV8 347 aaKnown RBP14.24□□□□□ -0.13
UBC-208ENST00000540700 A0A1B0GTI1 187 aa14.23□□□□□ -0.13
UBC-208ENST00000540700 ACOD1A6NK06 481 aa14.23□□□□□ -0.13
UBC-208ENST00000540700 B9A039 149 aa14.23□□□□□ -0.13
UBC-208ENST00000540700 H3BSA7 217 aa14.23□□□□□ -0.13
UBC-208ENST00000540700 OVOL3O00110 214 aa14.23□□□□□ -0.13
UBC-208ENST00000540700 RGS10O43665 173 aa14.23□□□□□ -0.13
UBC-208ENST00000540700 MYL12AP19105 171 aa14.23□□□□□ -0.13
UBC-208ENST00000540700 KITLGP21583 273 aa14.23□□□□□ -0.13
UBC-208ENST00000540700 ACKR3P25106 362 aa14.23□□□□□ -0.13
UBC-208ENST00000540700 CDKN1AP38936 164 aa14.23□□□□□ -0.13
UBC-208ENST00000540700 MMP15P51511 669 aa14.23□□□□□ -0.13
UBC-208ENST00000540700 KLF3P57682 345 aaPredicted RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms