RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 TOR3AQ9H497 397 aa10.93□□□□□ -0.66
SEMA4D-223ENST00000540475 PRDM13Q9H4Q3 707 aa10.93□□□□□ -0.66
SEMA4D-223ENST00000540475 ARMC1Q9NVT9 282 aa10.93□□□□□ -0.66
SEMA4D-223ENST00000540475 RNF7Q9UBF6 113 aa10.93□□□□□ -0.66
SEMA4D-223ENST00000540475 U3KQV3 271 aa10.93□□□□□ -0.66
SEMA4D-223ENST00000540475 DHRS12A0PJE2 317 aa10.92□□□□□ -0.66
SEMA4D-223ENST00000540475 ZNF878C9JN71 531 aa10.92□□□□□ -0.66
SEMA4D-223ENST00000540475 XRCC2O43543 280 aa10.92□□□□□ -0.66
SEMA4D-223ENST00000540475 IFNGP01579 166 aa10.92□□□□□ -0.66
SEMA4D-223ENST00000540475 GYPBP06028 91 aa10.92□□□□□ -0.66
SEMA4D-223ENST00000540475 SPARCP09486 303 aa10.92□□□□□ -0.66
SEMA4D-223ENST00000540475 HKR1P10072 659 aa10.92□□□□□ -0.66
SEMA4D-223ENST00000540475 HOXB6P17509 224 aaKnown RBP10.92□□□□□ -0.66
SEMA4D-223ENST00000540475 GRK5P34947 590 aa10.92□□□□□ -0.66
SEMA4D-223ENST00000540475 PITPNBP48739 271 aa10.92□□□□□ -0.66
SEMA4D-223ENST00000540475 GRB2P62993 217 aaKnown RBP10.92□□□□□ -0.66
SEMA4D-223ENST00000540475 C11orf91Q3C1V1 193 aa10.92□□□□□ -0.66
SEMA4D-223ENST00000540475 PRAMEF6Q5VXH4 476 aa10.92□□□□□ -0.66
SEMA4D-223ENST00000540475 LYPD2Q6UXB3 125 aa10.92□□□□□ -0.66
SEMA4D-223ENST00000540475 BTNL3Q6UXE8 466 aa10.92□□□□□ -0.66
SEMA4D-223ENST00000540475 NLRC3Q7RTR2 1065 aa10.92□□□□□ -0.66
SEMA4D-223ENST00000540475 OR10G2Q8NGC3 310 aa10.92□□□□□ -0.66
SEMA4D-223ENST00000540475 OR8B3Q8NGG8 313 aa10.92□□□□□ -0.66
SEMA4D-223ENST00000540475 RNF133Q8WVZ7 376 aa10.92□□□□□ -0.66
SEMA4D-223ENST00000540475 OR8B2Q96RD0 313 aa10.92□□□□□ -0.66
SEMA4D-223ENST00000540475 FEVQ99581 238 aa10.92□□□□□ -0.66
SEMA4D-223ENST00000540475 FN3KRPQ9HA64 309 aa10.92□□□□□ -0.66
SEMA4D-223ENST00000540475 IGHV3-64DA0A0J9YX35 117 aa10.91□□□□□ -0.66
SEMA4D-223ENST00000540475 GGT3PA6NGU5 568 aa10.91□□□□□ -0.66
SEMA4D-223ENST00000540475 AQP12BA6NM10 295 aa10.91□□□□□ -0.66
SEMA4D-223ENST00000540475 NDUFA2O43678 99 aa10.91□□□□□ -0.66
SEMA4D-223ENST00000540475 GLCEO94923 617 aa10.91□□□□□ -0.66
SEMA4D-223ENST00000540475 SOX14O95416 240 aa10.91□□□□□ -0.66
SEMA4D-223ENST00000540475 APOC1P02654 83 aa10.91□□□□□ -0.66
SEMA4D-223ENST00000540475 RNASE1P07998 156 aaKnown RBP10.91□□□□□ -0.66
SEMA4D-223ENST00000540475 IGHV4-38-2P0DP08 117 aa10.91□□□□□ -0.66
SEMA4D-223ENST00000540475 ZNF3P17036 446 aa10.91□□□□□ -0.66
SEMA4D-223ENST00000540475 SLC15A1P46059 708 aa10.91□□□□□ -0.66
SEMA4D-223ENST00000540475 PRKXP51817 358 aa10.91□□□□□ -0.66
SEMA4D-223ENST00000540475 BPIFB3P59826 476 aa10.91□□□□□ -0.66
SEMA4D-223ENST00000540475 FAM3AP98173 230 aa10.91□□□□□ -0.66
SEMA4D-223ENST00000540475 KCNJ8Q15842 424 aa10.91□□□□□ -0.66
SEMA4D-223ENST00000540475 AWAT1Q58HT5 328 aa10.91□□□□□ -0.66
SEMA4D-223ENST00000540475 RBMS3Q6XE24 437 aaKnown RBP10.91□□□□□ -0.66
SEMA4D-223ENST00000540475 AQP12AQ8IXF9 295 aa10.91□□□□□ -0.66
SEMA4D-223ENST00000540475 C11orf53Q8IXP5 236 aa10.91□□□□□ -0.66
SEMA4D-223ENST00000540475 TIGD4Q8IY51 512 aa10.91□□□□□ -0.66
SEMA4D-223ENST00000540475 ADGRG5Q8IZF4 528 aa10.91□□□□□ -0.66
SEMA4D-223ENST00000540475 PARP8Q8N3A8 854 aa10.91□□□□□ -0.66
SEMA4D-223ENST00000540475 CCDC197Q8NCU1 140 aa10.91□□□□□ -0.66
SEMA4D-223ENST00000540475 GIPC3Q8TF64 312 aa10.91□□□□□ -0.66
SEMA4D-223ENST00000540475 SGK3Q96BR1 496 aa10.91□□□□□ -0.66
SEMA4D-223ENST00000540475 ZMYND19Q96E35 227 aaPredicted RBP10.91□□□□□ -0.66
SEMA4D-223ENST00000540475 COPS4Q9BT78 406 aa10.91□□□□□ -0.66
SEMA4D-223ENST00000540475 ADAT1Q9BUB4 502 aaKnown RBP10.91□□□□□ -0.66
SEMA4D-223ENST00000540475 CHID1Q9BWS9 393 aa10.91□□□□□ -0.66
SEMA4D-223ENST00000540475 TRIM36Q9NQ86 728 aa10.91□□□□□ -0.66
SEMA4D-223ENST00000540475 CLN8Q9UBY8 286 aa10.91□□□□□ -0.66
SEMA4D-223ENST00000540475 DNAJC9-AS1A6NH13 148 aa10.9□□□□□ -0.66
SEMA4D-223ENST00000540475 RIIAD1A6NNX1 92 aa10.9□□□□□ -0.66
SEMA4D-223ENST00000540475 LGALS8O00214 317 aa10.9□□□□□ -0.66
SEMA4D-223ENST00000540475 LIPFP07098 398 aa10.9□□□□□ -0.66
SEMA4D-223ENST00000540475 OPRL1P41146 370 aa10.9□□□□□ -0.66
SEMA4D-223ENST00000540475 MZT1Q08AG7 82 aa10.9□□□□□ -0.66
SEMA4D-223ENST00000540475 FOXL1Q12952 345 aa10.9□□□□□ -0.66
SEMA4D-223ENST00000540475 KLHL12Q53G59 568 aa10.9□□□□□ -0.66
SEMA4D-223ENST00000540475 TEX36Q5VZQ5 186 aa10.9□□□□□ -0.66
SEMA4D-223ENST00000540475 KRT74Q7RTS7 529 aa10.9□□□□□ -0.66
SEMA4D-223ENST00000540475 SLC16A9Q7RTY1 509 aa10.9□□□□□ -0.66
SEMA4D-223ENST00000540475 DPY19L4Q7Z388 723 aa10.9□□□□□ -0.66
SEMA4D-223ENST00000540475 TMEM179BQ7Z7N9 219 aa10.9□□□□□ -0.66
SEMA4D-223ENST00000540475 GCSAMQ8N6F7 178 aa10.9□□□□□ -0.66
SEMA4D-223ENST00000540475 C3orf56Q8N813 242 aa10.9□□□□□ -0.66
SEMA4D-223ENST00000540475 OR56B2PQ8NGI1 322 aa10.9□□□□□ -0.66
SEMA4D-223ENST00000540475 OR52H1Q8NGJ2 320 aa10.9□□□□□ -0.66
SEMA4D-223ENST00000540475 NUDT16L1Q9BRJ7 211 aaKnown RBP10.9□□□□□ -0.66
SEMA4D-223ENST00000540475 ABHD6Q9BV23 337 aa10.9□□□□□ -0.66
SEMA4D-223ENST00000540475 SP140LQ9H930 580 aa10.9□□□□□ -0.66
SEMA4D-223ENST00000540475 CENPMQ9NSP4 180 aa10.9□□□□□ -0.66
SEMA4D-223ENST00000540475 UFSP2Q9NUQ7 469 aa10.9□□□□□ -0.66
SEMA4D-223ENST00000540475 KAAG1Q9UBP8 84 aa10.9□□□□□ -0.66
SEMA4D-223ENST00000540475 CTSZQ9UBR2 303 aa10.9□□□□□ -0.66
SEMA4D-223ENST00000540475 TRAV38-1A0A0B4J264 116 aa10.89□□□□□ -0.67
SEMA4D-223ENST00000540475 hCG_38984A0A1B0GV85 526 aa10.89□□□□□ -0.67
SEMA4D-223ENST00000540475 OOEPA6NGQ2 149 aa10.89□□□□□ -0.67
SEMA4D-223ENST00000540475 C22orf46C9J442 243 aa10.89□□□□□ -0.67
SEMA4D-223ENST00000540475 FCN3O75636 299 aa10.89□□□□□ -0.67
SEMA4D-223ENST00000540475 CST1P01037 141 aa10.89□□□□□ -0.67
SEMA4D-223ENST00000540475 SLC2A1P11166 492 aa10.89□□□□□ -0.67
SEMA4D-223ENST00000540475 EGR1P18146 543 aa10.89□□□□□ -0.67
SEMA4D-223ENST00000540475 GSTT1P30711 240 aa10.89□□□□□ -0.67
SEMA4D-223ENST00000540475 CFHR2P36980 270 aa10.89□□□□□ -0.67
SEMA4D-223ENST00000540475 MTNR1AP48039 350 aa10.89□□□□□ -0.67
SEMA4D-223ENST00000540475 CX3CR1P49238 355 aa10.89□□□□□ -0.67
SEMA4D-223ENST00000540475 CDK5Q00535 292 aa10.89□□□□□ -0.67
SEMA4D-223ENST00000540475 EIF2B1Q14232 305 aaKnown RBP10.89□□□□□ -0.67
SEMA4D-223ENST00000540475 TAF13Q15543 124 aa10.89□□□□□ -0.67
SEMA4D-223ENST00000540475 CD276Q5ZPR3 534 aa10.89□□□□□ -0.67
SEMA4D-223ENST00000540475 SHFQ7M4L6 423 aa10.89□□□□□ -0.67
SEMA4D-223ENST00000540475 PAPD5Q8NDF8 572 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms