RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 RPUSD1Q9UJJ7 312 aaKnown RBP10.31□□□□□ -0.76
COPS7A-211ENST00000540408 ZNF281Q9Y2X9 895 aa10.31□□□□□ -0.76
COPS7A-211ENST00000540408 ANKRD61A6NGH8 418 aa10.3□□□□□ -0.76
COPS7A-211ENST00000540408 ARPC3O15145 178 aa10.3□□□□□ -0.76
COPS7A-211ENST00000540408 SLC22A2O15244 555 aa10.3□□□□□ -0.76
COPS7A-211ENST00000540408 GPR37O15354 613 aa10.3□□□□□ -0.76
COPS7A-211ENST00000540408 OR10H3O60404 316 aa10.3□□□□□ -0.76
COPS7A-211ENST00000540408 GMNNO75496 209 aa10.3□□□□□ -0.76
COPS7A-211ENST00000540408 TSPAN15O95858 294 aa10.3□□□□□ -0.76
COPS7A-211ENST00000540408 PAHP00439 452 aa10.3□□□□□ -0.76
COPS7A-211ENST00000540408 SMIM11AP58511 58 aa10.3□□□□□ -0.76
COPS7A-211ENST00000540408 FXYD6P3P58550 94 aa10.3□□□□□ -0.76
COPS7A-211ENST00000540408 ZNF92Q03936 586 aa10.3□□□□□ -0.76
COPS7A-211ENST00000540408 MICBQ29980 383 aa10.3□□□□□ -0.76
COPS7A-211ENST00000540408 FBLN7Q53RD9 439 aa10.3□□□□□ -0.76
COPS7A-211ENST00000540408 SLC36A1Q7Z2H8 476 aa10.3□□□□□ -0.76
COPS7A-211ENST00000540408 VMO1Q7Z5L0 202 aa10.3□□□□□ -0.76
COPS7A-211ENST00000540408 ZBTB46Q86UZ6 589 aa10.3□□□□□ -0.76
COPS7A-211ENST00000540408 GALNT4Q8N4A0 578 aa10.3□□□□□ -0.76
COPS7A-211ENST00000540408 OR8S1Q8NH09 359 aa10.3□□□□□ -0.76
COPS7A-211ENST00000540408 OR4K13Q8NH42 304 aa10.3□□□□□ -0.76
COPS7A-211ENST00000540408 FANK1Q8TC84 345 aa10.3□□□□□ -0.76
COPS7A-211ENST00000540408 DMRTB1Q96MA1 342 aa10.3□□□□□ -0.76
COPS7A-211ENST00000540408 IFT27Q9BW83 186 aa10.3□□□□□ -0.76
COPS7A-211ENST00000540408 OPA3Q9H6K4 179 aa10.3□□□□□ -0.76
COPS7A-211ENST00000540408 NDUFAF4Q9P032 175 aa10.3□□□□□ -0.76
COPS7A-211ENST00000540408 ONECUT1Q9UBC0 465 aa10.3□□□□□ -0.76
COPS7A-211ENST00000540408 VPREB3Q9UKI3 123 aa10.3□□□□□ -0.76
COPS7A-211ENST00000540408 TRBV4-1A0A0J9YWV2 114 aa10.29□□□□□ -0.76
COPS7A-211ENST00000540408 ZNF816-ZNF321PA0A0X1KG74 233 aa10.29□□□□□ -0.76
COPS7A-211ENST00000540408 IDH3BO43837 385 aa10.29□□□□□ -0.76
COPS7A-211ENST00000540408 TSPAN9O75954 239 aa10.29□□□□□ -0.76
COPS7A-211ENST00000540408 LHBP01229 141 aa10.29□□□□□ -0.76
COPS7A-211ENST00000540408 MUC1P15941 1255 aaPredicted RBP10.29□□□□□ -0.76
COPS7A-211ENST00000540408 HIST1H1CP16403 213 aaKnown RBP10.29□□□□□ -0.76
COPS7A-211ENST00000540408 IFNGR2P38484 337 aa10.29□□□□□ -0.76
COPS7A-211ENST00000540408 DDOSTP39656 456 aa10.29□□□□□ -0.76
COPS7A-211ENST00000540408 SLC7A2P52569 658 aa10.29□□□□□ -0.76
COPS7A-211ENST00000540408 HOXA4Q00056 320 aaPredicted RBP10.29□□□□□ -0.76
COPS7A-211ENST00000540408 SF3A3Q12874 501 aaKnown RBP eCLIP10.29□□□□□ -0.76
COPS7A-211ENST00000540408 TAF13Q15543 124 aa10.29□□□□□ -0.76
COPS7A-211ENST00000540408 TEX36Q5VZQ5 186 aa10.29□□□□□ -0.76
COPS7A-211ENST00000540408 METAP1DQ6UB28 335 aaPredicted RBP10.29□□□□□ -0.76
COPS7A-211ENST00000540408 DRAM2Q6UX65 266 aa10.29□□□□□ -0.76
COPS7A-211ENST00000540408 ZNF826PQ6ZT77 177 aa10.29□□□□□ -0.76
COPS7A-211ENST00000540408 Q6ZTK2 550 aa10.29□□□□□ -0.76
COPS7A-211ENST00000540408 HDXQ7Z353 690 aa10.29□□□□□ -0.76
COPS7A-211ENST00000540408 FAM90A1Q86YD7 464 aa10.29□□□□□ -0.76
COPS7A-211ENST00000540408 LNX2Q8N448 690 aa10.29□□□□□ -0.76
COPS7A-211ENST00000540408 PIP4P2Q8N4L2 257 aa10.29□□□□□ -0.76
COPS7A-211ENST00000540408 GCSAMQ8N6F7 178 aa10.29□□□□□ -0.76
COPS7A-211ENST00000540408 OR52J3Q8NH60 311 aa10.29□□□□□ -0.76
COPS7A-211ENST00000540408 OR5R1Q8NH85 324 aa10.29□□□□□ -0.76
COPS7A-211ENST00000540408 KCTD14Q9BQ13 255 aaPredicted RBP10.29□□□□□ -0.76
COPS7A-211ENST00000540408 OR52D1Q9H346 318 aa10.29□□□□□ -0.76
COPS7A-211ENST00000540408 EFCAB1Q9HAE3 211 aa10.29□□□□□ -0.76
COPS7A-211ENST00000540408 RNPEPL1Q9HAU8 725 aa10.29□□□□□ -0.76
COPS7A-211ENST00000540408 PNRC2Q9NPJ4 139 aaKnown RBP10.29□□□□□ -0.76
COPS7A-211ENST00000540408 GMPR2Q9P2T1 348 aaKnown RBP10.29□□□□□ -0.76
COPS7A-211ENST00000540408 SAMD4AQ9UPU9 718 aaKnown RBP10.29□□□□□ -0.76
COPS7A-211ENST00000540408 WNK1Q9H4A3 2382 aa10.29□□□□□ -0.76
COPS7A-211ENST00000540408 ANKRD30BLA7E2S9 258 aa10.28□□□□□ -0.76
COPS7A-211ENST00000540408 NME4O00746 187 aa10.28□□□□□ -0.76
COPS7A-211ENST00000540408 XRCC2O43543 280 aa10.28□□□□□ -0.76
COPS7A-211ENST00000540408 NDUFB3O43676 98 aa10.28□□□□□ -0.76
COPS7A-211ENST00000540408 NAA10P41227 235 aaPredicted RBP10.28□□□□□ -0.76
COPS7A-211ENST00000540408 GSK3BP49841 420 aa10.28□□□□□ -0.76
COPS7A-211ENST00000540408 EGR3Q06889 387 aa10.28□□□□□ -0.76
COPS7A-211ENST00000540408 POU4F2Q12837 409 aa10.28□□□□□ -0.76
COPS7A-211ENST00000540408 SEC23BQ15437 767 aa10.28□□□□□ -0.76
COPS7A-211ENST00000540408 SNAI3Q3KNW1 292 aa10.28□□□□□ -0.76
COPS7A-211ENST00000540408 GLYATL3Q5SZD4 288 aa10.28□□□□□ -0.76
COPS7A-211ENST00000540408 OR2AE1Q8NHA4 323 aa10.28□□□□□ -0.76
COPS7A-211ENST00000540408 MAP6Q96JE9 813 aa10.28□□□□□ -0.76
COPS7A-211ENST00000540408 COPS4Q9BT78 406 aa10.28□□□□□ -0.76
COPS7A-211ENST00000540408 FGFR1OP2Q9NVK5 253 aa10.28□□□□□ -0.76
COPS7A-211ENST00000540408 ZNRD1Q9P1U0 126 aa10.28□□□□□ -0.76
COPS7A-211ENST00000540408 N6AMT1Q9Y5N5 214 aa10.28□□□□□ -0.76
COPS7A-211ENST00000540408 IGHV3OR15-7A0A075B7D8 119 aa10.27□□□□□ -0.77
COPS7A-211ENST00000540408 OR6C68A6NDL8 312 aa10.27□□□□□ -0.77
COPS7A-211ENST00000540408 TIPRLO75663 272 aa10.27□□□□□ -0.77
COPS7A-211ENST00000540408 DIRAS1O95057 198 aa10.27□□□□□ -0.77
COPS7A-211ENST00000540408 GADD45GO95257 159 aa10.27□□□□□ -0.77
COPS7A-211ENST00000540408 NCK1P16333 377 aa10.27□□□□□ -0.77
COPS7A-211ENST00000540408 GABRA5P31644 462 aa10.27□□□□□ -0.77
COPS7A-211ENST00000540408 LRRC10Q5BKY1 277 aa10.27□□□□□ -0.77
COPS7A-211ENST00000540408 GLYATQ6IB77 296 aa10.27□□□□□ -0.77
COPS7A-211ENST00000540408 DPY19L4Q7Z388 723 aa10.27□□□□□ -0.77
COPS7A-211ENST00000540408 LY6G5BQ8NDX9 201 aa10.27□□□□□ -0.77
COPS7A-211ENST00000540408 SDR9C7Q8NEX9 313 aa10.27□□□□□ -0.77
COPS7A-211ENST00000540408 PROKR2Q8NFJ6 384 aa10.27□□□□□ -0.77
COPS7A-211ENST00000540408 OR56B2PQ8NGI1 322 aa10.27□□□□□ -0.77
COPS7A-211ENST00000540408 LRRC29Q8WV35 223 aa10.27□□□□□ -0.77
COPS7A-211ENST00000540408 CCL13Q99616 98 aa10.27□□□□□ -0.77
COPS7A-211ENST00000540408 KCNJ15Q99712 375 aa10.27□□□□□ -0.77
COPS7A-211ENST00000540408 SP140LQ9H930 580 aa10.27□□□□□ -0.77
COPS7A-211ENST00000540408 SIRT7Q9NRC8 400 aa10.27□□□□□ -0.77
COPS7A-211ENST00000540408 FBLN5Q9UBX5 448 aa10.27□□□□□ -0.77
COPS7A-211ENST00000540408 NOTCH1P46531 2555 aa10.27□□□□□ -0.77
COPS7A-211ENST00000540408 MEIOCA2RUB1 952 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms