RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 OTX1P32242 354 aaPredicted RBP14.81□□□□□ -0.04
COPS3-212ENST00000539941 TMPRSS3P57727 454 aa14.81□□□□□ -0.04
COPS3-212ENST00000539941 GRK1Q15835 563 aa14.81□□□□□ -0.04
COPS3-212ENST00000539941 ZNF79Q15937 498 aa14.81□□□□□ -0.04
COPS3-212ENST00000539941 BAK1Q16611 211 aa14.81□□□□□ -0.04
COPS3-212ENST00000539941 TBR1Q16650 682 aa14.81□□□□□ -0.04
COPS3-212ENST00000539941 TATDN3Q17R31 274 aa14.81□□□□□ -0.04
COPS3-212ENST00000539941 METAP1DQ6UB28 335 aaPredicted RBP14.81□□□□□ -0.04
COPS3-212ENST00000539941 PLXDC2Q6UX71 529 aa14.81□□□□□ -0.04
COPS3-212ENST00000539941 STAC2Q6ZMT1 411 aa14.81□□□□□ -0.04
COPS3-212ENST00000539941 ASB5Q8WWX0 329 aa14.81□□□□□ -0.04
COPS3-212ENST00000539941 AKAP1Q92667 903 aaKnown RBP eCLIP14.81□□□□□ -0.04
COPS3-212ENST00000539941 PPP1R14AQ96A00 147 aa14.81□□□□□ -0.04
COPS3-212ENST00000539941 RADILQ96JH8 1075 aa14.81□□□□□ -0.04
COPS3-212ENST00000539941 ABRACLQ9P1F3 81 aa14.81□□□□□ -0.04
COPS3-212ENST00000539941 COMMD3Q9UBI1 195 aa14.81□□□□□ -0.04
COPS3-212ENST00000539941 UPB1Q9UBR1 384 aa14.81□□□□□ -0.04
COPS3-212ENST00000539941 SLC19A2O60779 497 aa14.8□□□□□ -0.04
COPS3-212ENST00000539941 SS18L1O75177 396 aaPredicted RBP14.8□□□□□ -0.04
COPS3-212ENST00000539941 TTRP02766 147 aa14.8□□□□□ -0.04
COPS3-212ENST00000539941 FSTP19883 344 aa14.8□□□□□ -0.04
COPS3-212ENST00000539941 THBS2P35442 1172 aa14.8□□□□□ -0.04
COPS3-212ENST00000539941 MAGEB1P43366 347 aa14.8□□□□□ -0.04
COPS3-212ENST00000539941 CX3CR1P49238 355 aa14.8□□□□□ -0.04
COPS3-212ENST00000539941 ZNF121P58317 390 aaPredicted RBP14.8□□□□□ -0.04
COPS3-212ENST00000539941 BTG1P62324 171 aa14.8□□□□□ -0.04
COPS3-212ENST00000539941 AANATQ16613 207 aa14.8□□□□□ -0.04
COPS3-212ENST00000539941 CLVS2Q5SYC1 327 aa14.8□□□□□ -0.04
COPS3-212ENST00000539941 FAM131AQ6UXB0 335 aa14.8□□□□□ -0.04
COPS3-212ENST00000539941 ZNF813Q6ZN06 617 aa14.8□□□□□ -0.04
COPS3-212ENST00000539941 COMMD7Q86VX2 200 aa14.8□□□□□ -0.04
COPS3-212ENST00000539941 LINC00518Q8N0U6 118 aa14.8□□□□□ -0.04
COPS3-212ENST00000539941 ZNF283Q8N7M2 679 aa14.8□□□□□ -0.04
COPS3-212ENST00000539941 SPTSSAQ969W0 71 aa14.8□□□□□ -0.04
COPS3-212ENST00000539941 MRI1Q9BV20 369 aa14.8□□□□□ -0.04
COPS3-212ENST00000539941 SCPEP1Q9HB40 452 aa14.8□□□□□ -0.04
COPS3-212ENST00000539941 RBFOX1Q9NWB1 397 aaKnown RBP14.8□□□□□ -0.04
COPS3-212ENST00000539941 PLEK2Q9NYT0 353 aa14.8□□□□□ -0.04
COPS3-212ENST00000539941 SLC23A1Q9UHI7 598 aa14.8□□□□□ -0.04
COPS3-212ENST00000539941 FOXJ3Q9UPW0 622 aa14.8□□□□□ -0.04
COPS3-212ENST00000539941 SLC5A6Q9Y289 635 aa14.8□□□□□ -0.04
COPS3-212ENST00000539941 AK6Q9Y3D8 172 aaKnown RBP14.8□□□□□ -0.04
COPS3-212ENST00000539941 TIMM10BQ9Y5J6 103 aa14.8□□□□□ -0.04
COPS3-212ENST00000539941 ALG5Q9Y673 324 aa14.8□□□□□ -0.04
COPS3-212ENST00000539941 TTLL8A6PVC2 850 aa14.79□□□□□ -0.04
COPS3-212ENST00000539941 AHRRA9YTQ3 701 aa14.79□□□□□ -0.04
COPS3-212ENST00000539941 SGCEO43556 437 aa14.79□□□□□ -0.04
COPS3-212ENST00000539941 ACSM4P0C7M7 580 aa14.79□□□□□ -0.04
COPS3-212ENST00000539941 PRKXP51817 358 aa14.79□□□□□ -0.04
COPS3-212ENST00000539941 SLC25A35Q3KQZ1 300 aa14.79□□□□□ -0.04
COPS3-212ENST00000539941 SLC16A14Q7RTX9 510 aa14.79□□□□□ -0.04
COPS3-212ENST00000539941 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.79□□□□□ -0.04
COPS3-212ENST00000539941 NUFIP2Q7Z417 695 aaKnown RBP14.79□□□□□ -0.04
COPS3-212ENST00000539941 LRRTM1Q86UE6 522 aa14.79□□□□□ -0.04
COPS3-212ENST00000539941 C19orf18Q8NEA5 215 aa14.79□□□□□ -0.04
COPS3-212ENST00000539941 ZNF680Q8NEM1 530 aa14.79□□□□□ -0.04
COPS3-212ENST00000539941 WNT2BQ93097 391 aa14.79□□□□□ -0.04
COPS3-212ENST00000539941 ABHD17AQ96GS6 310 aa14.79□□□□□ -0.04
COPS3-212ENST00000539941 DIRAS2Q96HU8 199 aa14.79□□□□□ -0.04
COPS3-212ENST00000539941 BBC3Q96PG8 261 aaPredicted RBP14.79□□□□□ -0.04
COPS3-212ENST00000539941 SLC25A18Q9H1K4 315 aa14.79□□□□□ -0.04
COPS3-212ENST00000539941 CKLFQ9UBR5 152 aa14.79□□□□□ -0.04
COPS3-212ENST00000539941 SESN1Q9Y6P5 492 aa14.79□□□□□ -0.04
COPS3-212ENST00000539941 V9GY05 133 aa14.79□□□□□ -0.04
COPS3-212ENST00000539941 K7EM74 188 aa14.78□□□□□ -0.04
COPS3-212ENST00000539941 AIPO00170 330 aa14.78□□□□□ -0.04
COPS3-212ENST00000539941 IGHV3-9P01782 118 aa14.78□□□□□ -0.04
COPS3-212ENST00000539941 HOXD4P09016 255 aaPredicted RBP14.78□□□□□ -0.04
COPS3-212ENST00000539941 C4BPBP20851 252 aa14.78□□□□□ -0.04
COPS3-212ENST00000539941 OR3A2P47893 321 aa14.78□□□□□ -0.04
COPS3-212ENST00000539941 FGD2Q7Z6J4 655 aa14.78□□□□□ -0.04
COPS3-212ENST00000539941 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.78□□□□□ -0.04
COPS3-212ENST00000539941 OR13C3Q8NGS6 347 aa14.78□□□□□ -0.04
COPS3-212ENST00000539941 ORAI1Q96D31 301 aa14.78□□□□□ -0.04
COPS3-212ENST00000539941 CLEC4MQ9H2X3 399 aaPredicted RBP14.78□□□□□ -0.04
COPS3-212ENST00000539941 BRD7Q9NPI1 651 aa14.78□□□□□ -0.04
COPS3-212ENST00000539941 ZNF224Q9NZL3 707 aa14.78□□□□□ -0.04
COPS3-212ENST00000539941 MALT1Q9UDY8 824 aa14.78□□□□□ -0.04
COPS3-212ENST00000539941 A0A1B0GVI7 797 aa14.77□□□□□ -0.04
COPS3-212ENST00000539941 FABP12A6NFH5 140 aa14.77□□□□□ -0.04
COPS3-212ENST00000539941 IFITM5A6NNB3 132 aa14.77□□□□□ -0.04
COPS3-212ENST00000539941 P2RY10O00398 339 aa14.77□□□□□ -0.04
COPS3-212ENST00000539941 TSPAN4O14817 238 aa14.77□□□□□ -0.04
COPS3-212ENST00000539941 AKR7A2O43488 359 aa14.77□□□□□ -0.04
COPS3-212ENST00000539941 SYNGR3O43761 229 aa14.77□□□□□ -0.04
COPS3-212ENST00000539941 DOK2O60496 412 aa14.77□□□□□ -0.04
COPS3-212ENST00000539941 CSF3P09919 207 aa14.77□□□□□ -0.04
COPS3-212ENST00000539941 RRASP10301 218 aa14.77□□□□□ -0.04
COPS3-212ENST00000539941 ZNF32P17041 273 aa14.77□□□□□ -0.04
COPS3-212ENST00000539941 ATF1P18846 271 aa14.77□□□□□ -0.04
COPS3-212ENST00000539941 ZP3P21754 424 aa14.77□□□□□ -0.04
COPS3-212ENST00000539941 CCL1P22362 96 aa14.77□□□□□ -0.04
COPS3-212ENST00000539941 CFPP27918 469 aa14.77□□□□□ -0.04
COPS3-212ENST00000539941 KIR2DL3P43628 341 aa14.77□□□□□ -0.04
COPS3-212ENST00000539941 ARF1P84077 181 aaKnown RBP14.77□□□□□ -0.04
COPS3-212ENST00000539941 PLEKHN1Q494U1 663 aaPredicted RBP14.77□□□□□ -0.04
COPS3-212ENST00000539941 TRIQKQ629K1 86 aa14.77□□□□□ -0.04
COPS3-212ENST00000539941 OR2A2Q6IF42 318 aa14.77□□□□□ -0.04
COPS3-212ENST00000539941 PRSS45Q7RTY3 260 aa14.77□□□□□ -0.04
COPS3-212ENST00000539941 LUZP2Q86TE4 346 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms