RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 TIGD6Q17RP2 521 aa12.75□□□□□ -0.37
UBE3B-211ENST00000539843 RSPO1Q2MKA7 263 aaPredicted RBP12.75□□□□□ -0.37
UBE3B-211ENST00000539843 C11orf91Q3C1V1 193 aa12.75□□□□□ -0.37
UBE3B-211ENST00000539843 SFRP4Q6FHJ7 346 aaPredicted RBP12.75□□□□□ -0.37
UBE3B-211ENST00000539843 C17orf107Q6ZR85 190 aa12.75□□□□□ -0.37
UBE3B-211ENST00000539843 LNX2Q8N448 690 aa12.75□□□□□ -0.37
UBE3B-211ENST00000539843 OR2T33Q8NG76 320 aa12.75□□□□□ -0.37
UBE3B-211ENST00000539843 OR9Q2Q8NGE9 314 aa12.75□□□□□ -0.37
UBE3B-211ENST00000539843 OR6K6Q8NGW6 343 aa12.75□□□□□ -0.37
UBE3B-211ENST00000539843 OR2AE1Q8NHA4 323 aa12.75□□□□□ -0.37
UBE3B-211ENST00000539843 GATAD2BQ8WXI9 593 aa12.75□□□□□ -0.37
UBE3B-211ENST00000539843 SLAMF6Q96DU3 332 aa12.75□□□□□ -0.37
UBE3B-211ENST00000539843 FAM71F1Q96KD3 344 aaPredicted RBP12.75□□□□□ -0.37
UBE3B-211ENST00000539843 TSSK6Q9BXA6 273 aa12.75□□□□□ -0.37
UBE3B-211ENST00000539843 SLITRK2Q9H156 845 aa12.75□□□□□ -0.37
UBE3B-211ENST00000539843 MUC13Q9H3R2 512 aa12.75□□□□□ -0.37
UBE3B-211ENST00000539843 TOR3AQ9H497 397 aa12.75□□□□□ -0.37
UBE3B-211ENST00000539843 REEP1Q9H902 201 aa12.75□□□□□ -0.37
UBE3B-211ENST00000539843 C1orf123Q9NWV4 160 aa12.75□□□□□ -0.37
UBE3B-211ENST00000539843 IL20Q9NYY1 176 aa12.75□□□□□ -0.37
UBE3B-211ENST00000539843 ARL2BPQ9Y2Y0 163 aa12.75□□□□□ -0.37
UBE3B-211ENST00000539843 LYVE1Q9Y5Y7 322 aa12.75□□□□□ -0.37
UBE3B-211ENST00000539843 COMMD3-BMI1R4GMX3 469 aa12.75□□□□□ -0.37
UBE3B-211ENST00000539843 ZNF879B4DU55 563 aa12.74□□□□□ -0.37
UBE3B-211ENST00000539843 HOXA3O43365 443 aaPredicted RBP12.74□□□□□ -0.37
UBE3B-211ENST00000539843 TOX4O94842 621 aa12.74□□□□□ -0.37
UBE3B-211ENST00000539843 ECDO95905 644 aaPredicted RBP12.74□□□□□ -0.37
UBE3B-211ENST00000539843 ANXA2P07355 339 aaKnown RBP12.74□□□□□ -0.37
UBE3B-211ENST00000539843 GRPP07492 148 aa12.74□□□□□ -0.37
UBE3B-211ENST00000539843 MSX2P35548 267 aaPredicted RBP12.74□□□□□ -0.37
UBE3B-211ENST00000539843 GNALP38405 381 aa12.74□□□□□ -0.37
UBE3B-211ENST00000539843 HMGA2P52926 109 aa12.74□□□□□ -0.37
UBE3B-211ENST00000539843 PDCD1Q15116 288 aa12.74□□□□□ -0.37
UBE3B-211ENST00000539843 MPPED2Q15777 294 aa12.74□□□□□ -0.37
UBE3B-211ENST00000539843 SNAI3Q3KNW1 292 aa12.74□□□□□ -0.37
UBE3B-211ENST00000539843 GLYATL3Q5SZD4 288 aa12.74□□□□□ -0.37
UBE3B-211ENST00000539843 LYPD2Q6UXB3 125 aa12.74□□□□□ -0.37
UBE3B-211ENST00000539843 BRD3OSQ6XYD6 125 aa12.74□□□□□ -0.37
UBE3B-211ENST00000539843 NAA40Q86UY6 237 aa12.74□□□□□ -0.37
UBE3B-211ENST00000539843 ARHGAP24Q8N264 748 aa12.74□□□□□ -0.37
UBE3B-211ENST00000539843 TMEM86BQ8N661 226 aa12.74□□□□□ -0.37
UBE3B-211ENST00000539843 AQP11Q8NBQ7 271 aa12.74□□□□□ -0.37
UBE3B-211ENST00000539843 SLC37A3Q8NCC5 494 aa12.74□□□□□ -0.37
UBE3B-211ENST00000539843 C19orf18Q8NEA5 215 aa12.74□□□□□ -0.37
UBE3B-211ENST00000539843 OR56B2PQ8NGI1 322 aa12.74□□□□□ -0.37
UBE3B-211ENST00000539843 OR51L1Q8NGJ5 315 aa12.74□□□□□ -0.37
UBE3B-211ENST00000539843 OR9Q1Q8NGQ5 310 aa12.74□□□□□ -0.37
UBE3B-211ENST00000539843 OR4F5Q8NH21 305 aa12.74□□□□□ -0.37
UBE3B-211ENST00000539843 TMIGD2Q96BF3 282 aa12.74□□□□□ -0.37
UBE3B-211ENST00000539843 C1orf147Q96MC9 270 aaPredicted RBP12.74□□□□□ -0.37
UBE3B-211ENST00000539843 BEX1Q9HBH7 125 aa12.74□□□□□ -0.37
UBE3B-211ENST00000539843 ACTR3BQ9P1U1 418 aa12.74□□□□□ -0.37
UBE3B-211ENST00000539843 SRRM5B3KS81 715 aa12.73□□□□□ -0.37
UBE3B-211ENST00000539843 ZNF593O00488 134 aaPredicted RBP12.73□□□□□ -0.37
UBE3B-211ENST00000539843 TIPRLO75663 272 aa12.73□□□□□ -0.37
UBE3B-211ENST00000539843 PTBP3O95758 552 aaKnown RBP12.73□□□□□ -0.37
UBE3B-211ENST00000539843 OTX1P32242 354 aaPredicted RBP12.73□□□□□ -0.37
UBE3B-211ENST00000539843 CFHR2P36980 270 aa12.73□□□□□ -0.37
UBE3B-211ENST00000539843 RPS27P42677 84 aaKnown RBP12.73□□□□□ -0.37
UBE3B-211ENST00000539843 SLC25A1P53007 311 aa12.73□□□□□ -0.37
UBE3B-211ENST00000539843 DEFB112Q30KQ8 113 aa12.73□□□□□ -0.37
UBE3B-211ENST00000539843 CYP2R1Q6VVX0 501 aa12.73□□□□□ -0.37
UBE3B-211ENST00000539843 SCCPDHQ8NBX0 429 aa12.73□□□□□ -0.37
UBE3B-211ENST00000539843 OR52H1Q8NGJ2 320 aa12.73□□□□□ -0.37
UBE3B-211ENST00000539843 TEX47Q8TBZ9 253 aa12.73□□□□□ -0.37
UBE3B-211ENST00000539843 TBC1D15Q8TC07 691 aa12.73□□□□□ -0.37
UBE3B-211ENST00000539843 DACT3Q96B18 629 aaPredicted RBP12.73□□□□□ -0.37
UBE3B-211ENST00000539843 BTBD10Q9BSF8 475 aa12.73□□□□□ -0.37
UBE3B-211ENST00000539843 MAGIXQ9H6Y5 334 aa12.73□□□□□ -0.37
UBE3B-211ENST00000539843 SAMHD1Q9Y3Z3 626 aaKnown RBP12.73□□□□□ -0.37
UBE3B-211ENST00000539843 ANXA2P2A6NMY6 339 aa12.72□□□□□ -0.37
UBE3B-211ENST00000539843 C22orf46C9J442 243 aa12.72□□□□□ -0.37
UBE3B-211ENST00000539843 KNG1P01042 644 aa12.72□□□□□ -0.37
UBE3B-211ENST00000539843 GASTP01350 101 aa12.72□□□□□ -0.37
UBE3B-211ENST00000539843 SPI1P17947 270 aa12.72□□□□□ -0.37
UBE3B-211ENST00000539843 PAICSP22234 425 aaKnown RBP12.72□□□□□ -0.37
UBE3B-211ENST00000539843 NAA10P41227 235 aaPredicted RBP12.72□□□□□ -0.37
UBE3B-211ENST00000539843 CRMP1Q14194 572 aa12.72□□□□□ -0.37
UBE3B-211ENST00000539843 EIF2B1Q14232 305 aaKnown RBP12.72□□□□□ -0.37
UBE3B-211ENST00000539843 GK3PQ14409 553 aa12.72□□□□□ -0.37
UBE3B-211ENST00000539843 MICBQ29980 383 aa12.72□□□□□ -0.37
UBE3B-211ENST00000539843 FAM98BQ52LJ0 330 aaKnown RBP12.72□□□□□ -0.37
UBE3B-211ENST00000539843 TEX30Q5JUR7 227 aa12.72□□□□□ -0.37
UBE3B-211ENST00000539843 ZNF841Q6ZN19 808 aa12.72□□□□□ -0.37
UBE3B-211ENST00000539843 SLC36A1Q7Z2H8 476 aa12.72□□□□□ -0.37
UBE3B-211ENST00000539843 SSMEM1Q8WWF3 244 aa12.72□□□□□ -0.37
UBE3B-211ENST00000539843 OTULINQ96BN8 352 aa12.72□□□□□ -0.37
UBE3B-211ENST00000539843 MARCH7Q9H992 704 aa12.72□□□□□ -0.37
UBE3B-211ENST00000539843 PRPF19Q9UMS4 504 aaKnown RBP12.72□□□□□ -0.37
UBE3B-211ENST00000539843 CAB39Q9Y376 341 aaPredicted RBP12.72□□□□□ -0.37
UBE3B-211ENST00000539843 MMP24Q9Y5R2 645 aa12.72□□□□□ -0.37
UBE3B-211ENST00000539843 POMT1Q9Y6A1 747 aa12.72□□□□□ -0.37
UBE3B-211ENST00000539843 TENM1Q9UKZ4 2725 aa12.72□□□□□ -0.37
UBE3B-211ENST00000539843 H3BN98 237 aa12.71□□□□□ -0.37
UBE3B-211ENST00000539843 GYPAP02724 150 aa12.71□□□□□ -0.37
UBE3B-211ENST00000539843 SLC2A1P11166 492 aa12.71□□□□□ -0.37
UBE3B-211ENST00000539843 MAGEA2P43356 314 aa12.71□□□□□ -0.37
UBE3B-211ENST00000539843 CX3CR1P49238 355 aa12.71□□□□□ -0.37
UBE3B-211ENST00000539843 RPL15P61313 204 aaKnown RBP12.71□□□□□ -0.37
UBE3B-211ENST00000539843 GNGT1P63211 74 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms