RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 KRTAP27-1Q3LI81 207 aa12.58□□□□□ -0.4
USB1-203ENST00000539737 DCXRQ7Z4W1 244 aa12.58□□□□□ -0.4
USB1-203ENST00000539737 BBS1Q8NFJ9 593 aa12.58□□□□□ -0.4
USB1-203ENST00000539737 TMEM163Q8TC26 289 aa12.58□□□□□ -0.4
USB1-203ENST00000539737 KLF14Q8TD94 323 aaPredicted RBP12.58□□□□□ -0.4
USB1-203ENST00000539737 SLC7A6Q92536 515 aa12.58□□□□□ -0.4
USB1-203ENST00000539737 APOBEC3DQ96AK3 386 aaPredicted RBP12.58□□□□□ -0.4
USB1-203ENST00000539737 EME1Q96AY2 570 aa12.58□□□□□ -0.4
USB1-203ENST00000539737 MARS2Q96GW9 593 aaKnown RBP12.58□□□□□ -0.4
USB1-203ENST00000539737 MAP6Q96JE9 813 aa12.58□□□□□ -0.4
USB1-203ENST00000539737 COPS4Q9BT78 406 aa12.58□□□□□ -0.4
USB1-203ENST00000539737 OR2J1Q9GZK6 312 aa12.58□□□□□ -0.4
USB1-203ENST00000539737 TANC2Q9HCD6 1990 aa12.58□□□□□ -0.4
USB1-203ENST00000539737 NGFP01138 241 aa12.57□□□□□ -0.4
USB1-203ENST00000539737 DBHP09172 617 aa12.57□□□□□ -0.4
USB1-203ENST00000539737 TPTEP56180 551 aa12.57□□□□□ -0.4
USB1-203ENST00000539737 CDC42P60953 191 aa12.57□□□□□ -0.4
USB1-203ENST00000539737 APOFQ13790 326 aa12.57□□□□□ -0.4
USB1-203ENST00000539737 EIF2B1Q14232 305 aaKnown RBP12.57□□□□□ -0.4
USB1-203ENST00000539737 NXNL2Q5VZ03 156 aa12.57□□□□□ -0.4
USB1-203ENST00000539737 GID4Q8IVV7 300 aa12.57□□□□□ -0.4
USB1-203ENST00000539737 TIGD4Q8IY51 512 aa12.57□□□□□ -0.4
USB1-203ENST00000539737 TCEANCQ8N8B7 351 aa12.57□□□□□ -0.4
USB1-203ENST00000539737 ZNF454Q8N9F8 522 aa12.57□□□□□ -0.4
USB1-203ENST00000539737 OR5L1Q8NGL2 311 aa12.57□□□□□ -0.4
USB1-203ENST00000539737 SLAMF6Q96DU3 332 aa12.57□□□□□ -0.4
USB1-203ENST00000539737 TNFRSF19Q9NS68 423 aa12.57□□□□□ -0.4
USB1-203ENST00000539737 SLC22A31A6NKX4 558 aa12.56□□□□□ -0.4
USB1-203ENST00000539737 J3QLI3 93 aa12.56□□□□□ -0.4
USB1-203ENST00000539737 M0R135 149 aa12.56□□□□□ -0.4
USB1-203ENST00000539737 ACSM4P0C7M7 580 aa12.56□□□□□ -0.4
USB1-203ENST00000539737 IGHV4-38-2P0DP08 117 aa12.56□□□□□ -0.4
USB1-203ENST00000539737 PSKH1P11801 424 aa12.56□□□□□ -0.4
USB1-203ENST00000539737 PRTN3P24158 256 aa12.56□□□□□ -0.4
USB1-203ENST00000539737 SLC15A1P46059 708 aa12.56□□□□□ -0.4
USB1-203ENST00000539737 GRB2P62993 217 aaKnown RBP12.56□□□□□ -0.4
USB1-203ENST00000539737 FOXL1Q12952 345 aa12.56□□□□□ -0.4
USB1-203ENST00000539737 BAMBIQ13145 260 aa12.56□□□□□ -0.4
USB1-203ENST00000539737 TAF13Q15543 124 aa12.56□□□□□ -0.4
USB1-203ENST00000539737 ZBTB49Q6ZSB9 765 aa12.56□□□□□ -0.4
USB1-203ENST00000539737 DPY19L4Q7Z388 723 aa12.56□□□□□ -0.4
USB1-203ENST00000539737 OR10S1Q8NGN2 331 aa12.56□□□□□ -0.4
USB1-203ENST00000539737 OR8J1Q8NGP2 316 aa12.56□□□□□ -0.4
USB1-203ENST00000539737 ST7LQ8TDW4 575 aa12.56□□□□□ -0.4
USB1-203ENST00000539737 ZNF799Q96GE5 643 aa12.56□□□□□ -0.4
USB1-203ENST00000539737 TOR3AQ9H497 397 aa12.56□□□□□ -0.4
USB1-203ENST00000539737 MSL2Q9HCI7 577 aa12.56□□□□□ -0.4
USB1-203ENST00000539737 IMPAD1Q9NX62 359 aa12.56□□□□□ -0.4
USB1-203ENST00000539737 H2AFY2Q9P0M6 372 aaPredicted RBP12.56□□□□□ -0.4
USB1-203ENST00000539737 CCDC182A6NF36 153 aa12.55□□□□□ -0.4
USB1-203ENST00000539737 ERICH4A6NGS2 130 aa12.55□□□□□ -0.4
USB1-203ENST00000539737 ANKRD65E5RJM6 399 aa12.55□□□□□ -0.4
USB1-203ENST00000539737 F5H5K5 113 aa12.55□□□□□ -0.4
USB1-203ENST00000539737 M0R129 80 aa12.55□□□□□ -0.4
USB1-203ENST00000539737 SELENOFO60613 162 aa12.55□□□□□ -0.4
USB1-203ENST00000539737 TNFRSF1AP19438 455 aa12.55□□□□□ -0.4
USB1-203ENST00000539737 FPR2P25090 351 aa12.55□□□□□ -0.4
USB1-203ENST00000539737 POLR2IP36954 125 aaKnown RBP12.55□□□□□ -0.4
USB1-203ENST00000539737 NAA10P41227 235 aaPredicted RBP12.55□□□□□ -0.4
USB1-203ENST00000539737 SLC6A9P48067 706 aa12.55□□□□□ -0.4
USB1-203ENST00000539737 MMP15P51511 669 aa12.55□□□□□ -0.4
USB1-203ENST00000539737 TNFAIP6P98066 277 aaPredicted RBP12.55□□□□□ -0.4
USB1-203ENST00000539737 RCN1Q15293 331 aa12.55□□□□□ -0.4
USB1-203ENST00000539737 AADACL4Q5VUY2 407 aa12.55□□□□□ -0.4
USB1-203ENST00000539737 DRAM2Q6UX65 266 aa12.55□□□□□ -0.4
USB1-203ENST00000539737 RHOUQ7L0Q8 258 aa12.55□□□□□ -0.4
USB1-203ENST00000539737 DOK3Q7L591 496 aa12.55□□□□□ -0.4
USB1-203ENST00000539737 SLC16A9Q7RTY1 509 aa12.55□□□□□ -0.4
USB1-203ENST00000539737 OTOSQ8NHW6 89 aa12.55□□□□□ -0.4
USB1-203ENST00000539737 FAM81AQ8TBF8 368 aa12.55□□□□□ -0.4
USB1-203ENST00000539737 RNF133Q8WVZ7 376 aa12.55□□□□□ -0.4
USB1-203ENST00000539737 HRASLS5Q96KN8 279 aa12.55□□□□□ -0.4
USB1-203ENST00000539737 CNN2Q99439 309 aaKnown RBP12.55□□□□□ -0.4
USB1-203ENST00000539737 YIPF3Q9GZM5 350 aa12.55□□□□□ -0.4
USB1-203ENST00000539737 POFUT1Q9H488 388 aa12.55□□□□□ -0.4
USB1-203ENST00000539737 C8orf4Q9NR00 106 aa12.55□□□□□ -0.4
USB1-203ENST00000539737 CENPMQ9NSP4 180 aa12.55□□□□□ -0.4
USB1-203ENST00000539737 APOC1P02654 83 aa12.54□□□□□ -0.4
USB1-203ENST00000539737 LYNP07948 512 aa12.54□□□□□ -0.4
USB1-203ENST00000539737 ADH4P08319 380 aa12.54□□□□□ -0.4
USB1-203ENST00000539737 SBK2P0C263 348 aa12.54□□□□□ -0.4
USB1-203ENST00000539737 HSD11B1P28845 292 aa12.54□□□□□ -0.4
USB1-203ENST00000539737 OTX1P32242 354 aaPredicted RBP12.54□□□□□ -0.4
USB1-203ENST00000539737 EFNB1P98172 346 aa12.54□□□□□ -0.4
USB1-203ENST00000539737 MALLQ13021 153 aa12.54□□□□□ -0.4
USB1-203ENST00000539737 SLC9A3R2Q15599 337 aa12.54□□□□□ -0.4
USB1-203ENST00000539737 TUSC1Q2TAM9 212 aa12.54□□□□□ -0.4
USB1-203ENST00000539737 ARMCX4Q5H9R4 360 aa12.54□□□□□ -0.4
USB1-203ENST00000539737 FBXW12Q6X9E4 464 aa12.54□□□□□ -0.4
USB1-203ENST00000539737 RBMS3Q6XE24 437 aaKnown RBP12.54□□□□□ -0.4
USB1-203ENST00000539737 COLCA1Q6ZS62 124 aa12.54□□□□□ -0.4
USB1-203ENST00000539737 MEPCEQ7L2J0 689 aaKnown RBP12.54□□□□□ -0.4
USB1-203ENST00000539737 TRUB1Q8WWH5 349 aaKnown RBP12.54□□□□□ -0.4
USB1-203ENST00000539737 RDH12Q96NR8 316 aa12.54□□□□□ -0.4
USB1-203ENST00000539737 IL4I1Q96RQ9 567 aa12.54□□□□□ -0.4
USB1-203ENST00000539737 TEAD3Q99594 435 aa12.54□□□□□ -0.4
USB1-203ENST00000539737 KCNJ15Q99712 375 aa12.54□□□□□ -0.4
USB1-203ENST00000539737 ABHD6Q9BV23 337 aa12.54□□□□□ -0.4
USB1-203ENST00000539737 PURGQ9UJV8 347 aaKnown RBP12.54□□□□□ -0.4
USB1-203ENST00000539737 STARD10Q9Y365 291 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms