RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 ROBO1Q9Y6N7 1651 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 PXDNLA1KZ92 1463 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 IGHV2OR16-5A0A0B4J2B6 119 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 SMCO3A2RU48 225 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 A6NIZ1 184 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 M0R3G1 203 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 RAB29O14966 203 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 FGF16O43320 207 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 EIF4E2O60573 245 aaKnown RBP0.71□□□□□ -2.3
HIF1A-204ENST00000539097 RP2O75695 350 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 ATP5LO75964 103 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 ERLIN2O94905 339 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 KLHL2O95198 593 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 FADS2O95864 444 aaKnown RBP0.71□□□□□ -2.3
HIF1A-204ENST00000539097 FTH1P02794 183 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 IGHV1-8P0DP01 117 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 PSMC3P17980 439 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 ADORA2BP29275 332 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 FGF9P31371 208 aaPredicted RBP0.71□□□□□ -2.3
HIF1A-204ENST00000539097 APOC4P55056 127 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 OR2B6P58173 313 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 RAP1BP61224 184 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 ARG2P78540 354 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 TPBGQ13641 420 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 ZSCAN26Q16670 478 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 TRIM16LQ309B1 348 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 Q3ZCU0 254 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 PIGGQ5H8A4 983 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 SAMD4BQ5PRF9 694 aaKnown RBP0.71□□□□□ -2.3
HIF1A-204ENST00000539097 MLIPQ5VWP3 458 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 RNASEKQ6P5S7 137 aaKnown RBP0.71□□□□□ -2.3
HIF1A-204ENST00000539097 RTL4Q6ZR62 310 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 GID4Q8IVV7 300 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 SLC35G3Q8N808 338 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 ACOT4Q8N9L9 421 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 OR13C9Q8NGT0 318 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 OR6K2Q8NGY2 324 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 OR6N2Q8NGY6 317 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 OR2L8Q8NGY9 312 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 RDH5Q92781 318 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 UCN3Q969E3 161 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 TADA1Q96BN2 335 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 CCDC127Q96BQ5 260 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 S100PBPQ96BU1 408 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 LRRC39Q96DD0 335 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 AURKBQ96GD4 344 aaPredicted RBP0.71□□□□□ -2.3
HIF1A-204ENST00000539097 SLC29A1Q99808 456 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 ELOVL6Q9H5J4 265 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 TMEM38AQ9H6F2 299 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 DMAP1Q9NPF5 467 aaPredicted RBP0.71□□□□□ -2.3
HIF1A-204ENST00000539097 LZTFL1Q9NQ48 299 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 MYEF2Q9P2K5 600 aaKnown RBP0.71□□□□□ -2.3
HIF1A-204ENST00000539097 RSPH14Q9UHP6 348 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 FLVCR2Q9UPI3 526 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 F11RQ9Y624 299 aaKnown RBP0.71□□□□□ -2.3
HIF1A-204ENST00000539097 CACNG2Q9Y698 323 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 FAM135BQ49AJ0 1406 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 SSC5DA1L4H1 1573 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 EYSQ5T1H1 3165 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 NEXMIFQ5QGS0 1516 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 CHD5Q8TDI0 1954 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 NRXN1Q9ULB1 1477 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 AKAP12Q02952 1782 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 MAST2Q6P0Q8 1798 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 A0A0A6YYD5 115 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 IGHV1OR15-9A0A0B4J2B8 117 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 KIR2DS1A0A191URI9 304 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 A0A1B0GUA9 196 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 A0A1B0GVY2 172 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 TCRBV9S1A1TA0A576 114 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 FAM231BA6NCW3 169 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 ZNF593O00488 134 aaPredicted RBP0.71□□□□□ -2.3
HIF1A-204ENST00000539097 TCAPO15273 167 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 ICOSLGO75144 302 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 CDH16O75309 829 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 GCM2O75603 506 aaPredicted RBP0.71□□□□□ -2.3
HIF1A-204ENST00000539097 PLEKHA8P1O95397 391 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 PTHP01270 115 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 HSPB1P04792 205 aaKnown RBP0.71□□□□□ -2.3
HIF1A-204ENST00000539097 VDAC1P21796 283 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 PTPRGP23470 1445 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 SERPINB5P36952 375 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 PRLHRP49683 370 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 CRISP3P54108 245 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 GGTLC2Q14390 218 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 PRPSAP1Q14558 356 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 HERPUD1Q15011 391 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 TRAM2Q15035 370 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 SHHQ15465 462 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 IDNKQ5T6J7 187 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 SLC8B1Q6J4K2 584 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 TMEM53Q6P2H8 277 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 TMEM205Q6UW68 189 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 IGFL2Q6UWQ7 119 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 CYHR1Q6ZMK1 362 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 SMG6Q86US8 1419 aaKnown RBP0.71□□□□□ -2.3
HIF1A-204ENST00000539097 KRTAP11-1Q8IUC1 163 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 NRMQ8IXM6 262 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 SYS1Q8N2H4 156 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 NPWQ8N729 165 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms