RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 WARS2Q9UGM6 360 aaKnown RBP11.56□□□□□ -0.56
CD9-208ENST00000538834 A8MV72 311 aaPredicted RBP11.55□□□□□ -0.56
CD9-208ENST00000538834 FAM157AC9JC47 383 aa11.55□□□□□ -0.56
CD9-208ENST00000538834 CLDN25C9JDP6 229 aa11.55□□□□□ -0.56
CD9-208ENST00000538834 IFNL4K9M1U5 179 aa11.55□□□□□ -0.56
CD9-208ENST00000538834 SLC16A6O15403 523 aa11.55□□□□□ -0.56
CD9-208ENST00000538834 PPIHO43447 177 aaKnown RBP11.55□□□□□ -0.56
CD9-208ENST00000538834 GMDSO60547 372 aa11.55□□□□□ -0.56
CD9-208ENST00000538834 H2BFMP0C1H6 154 aa11.55□□□□□ -0.56
CD9-208ENST00000538834 TNFSF4P23510 183 aa11.55□□□□□ -0.56
CD9-208ENST00000538834 SLC6A9P48067 706 aa11.55□□□□□ -0.56
CD9-208ENST00000538834 MMP16P51512 607 aa11.55□□□□□ -0.56
CD9-208ENST00000538834 ISL1P61371 349 aa11.55□□□□□ -0.56
CD9-208ENST00000538834 HNRNPA0Q13151 305 aaKnown RBP11.55□□□□□ -0.56
CD9-208ENST00000538834 TAF13Q15543 124 aa11.55□□□□□ -0.56
CD9-208ENST00000538834 KCTD18Q6PI47 426 aaPredicted RBP11.55□□□□□ -0.56
CD9-208ENST00000538834 LRRN1Q6UXK5 716 aa11.55□□□□□ -0.56
CD9-208ENST00000538834 SPATC1Q76KD6 591 aa11.55□□□□□ -0.56
CD9-208ENST00000538834 LRRC28Q86X40 367 aaPredicted RBP11.55□□□□□ -0.56
CD9-208ENST00000538834 KLBQ86Z14 1044 aa11.55□□□□□ -0.56
CD9-208ENST00000538834 PLPP7Q8NBV4 271 aa11.55□□□□□ -0.56
CD9-208ENST00000538834 ASB17Q8WXJ9 295 aa11.55□□□□□ -0.56
CD9-208ENST00000538834 ERGIC1Q969X5 290 aa11.55□□□□□ -0.56
CD9-208ENST00000538834 RNF166Q96A37 237 aaPredicted RBP11.55□□□□□ -0.56
CD9-208ENST00000538834 CNN2Q99439 309 aaKnown RBP11.55□□□□□ -0.56
CD9-208ENST00000538834 RGCCQ9H4X1 137 aa11.55□□□□□ -0.56
CD9-208ENST00000538834 CLN6Q9NWW5 311 aa11.55□□□□□ -0.56
CD9-208ENST00000538834 LAMP5Q9UJQ1 280 aa11.55□□□□□ -0.56
CD9-208ENST00000538834 NPTNQ9Y639 398 aa11.55□□□□□ -0.56
CD9-208ENST00000538834 TMEM14AQ9Y6G1 99 aa11.55□□□□□ -0.56
CD9-208ENST00000538834 A0A0U1RQV5 110 aa11.54□□□□□ -0.56
CD9-208ENST00000538834 LOC100289279A0A1B0GTE1 492 aa11.54□□□□□ -0.56
CD9-208ENST00000538834 F5H5P2 479 aa11.54□□□□□ -0.56
CD9-208ENST00000538834 TMEM178BH3BS89 294 aa11.54□□□□□ -0.56
CD9-208ENST00000538834 IGHV2-5P01817 119 aa11.54□□□□□ -0.56
CD9-208ENST00000538834 HLA-DPB1P04440 258 aa11.54□□□□□ -0.56
CD9-208ENST00000538834 HSD11B1P28845 292 aa11.54□□□□□ -0.56
CD9-208ENST00000538834 RBMXP38159 391 aaKnown RBP11.54□□□□□ -0.56
CD9-208ENST00000538834 RPS7P62081 194 aaKnown RBP11.54□□□□□ -0.56
CD9-208ENST00000538834 SLC3A1Q07837 685 aa11.54□□□□□ -0.56
CD9-208ENST00000538834 FAM57BQ71RH2 274 aa11.54□□□□□ -0.56
CD9-208ENST00000538834 MRPL21Q7Z2W9 205 aaKnown RBP11.54□□□□□ -0.56
CD9-208ENST00000538834 BHLHE23Q8NDY6 225 aa11.54□□□□□ -0.56
CD9-208ENST00000538834 OR10AD1Q8NGE0 317 aa11.54□□□□□ -0.56
CD9-208ENST00000538834 OR8B12Q8NGG6 310 aa11.54□□□□□ -0.56
CD9-208ENST00000538834 OR56B2PQ8NGI1 322 aa11.54□□□□□ -0.56
CD9-208ENST00000538834 CCL17Q92583 94 aa11.54□□□□□ -0.56
CD9-208ENST00000538834 RIBC2Q9H4K1 309 aa11.54□□□□□ -0.56
CD9-208ENST00000538834 ZNF391Q9UJN7 358 aa11.54□□□□□ -0.56
CD9-208ENST00000538834 POLR3KQ9Y2Y1 108 aaPredicted RBP11.54□□□□□ -0.56
CD9-208ENST00000538834 DSCAML1Q8TD84 2053 aa11.53□□□□□ -0.56
CD9-208ENST00000538834 F5H0A9 414 aaPredicted RBP11.53□□□□□ -0.56
CD9-208ENST00000538834 TNFRSF13BO14836 293 aaPredicted RBP11.53□□□□□ -0.56
CD9-208ENST00000538834 LMX1BO60663 402 aa11.53□□□□□ -0.56
CD9-208ENST00000538834 PNPP00491 289 aa11.53□□□□□ -0.56
CD9-208ENST00000538834 MRPL3P09001 348 aaKnown RBP11.53□□□□□ -0.56
CD9-208ENST00000538834 ZNF16P17020 682 aaPredicted RBP11.53□□□□□ -0.56
CD9-208ENST00000538834 CFL1P23528 166 aaKnown RBP11.53□□□□□ -0.56
CD9-208ENST00000538834 ACKR3P25106 362 aa11.53□□□□□ -0.56
CD9-208ENST00000538834 SRP9P49458 86 aaKnown RBP11.53□□□□□ -0.56
CD9-208ENST00000538834 GSK3AP49840 483 aa11.53□□□□□ -0.56
CD9-208ENST00000538834 DVL1P1P54792 670 aaPredicted RBP11.53□□□□□ -0.56
CD9-208ENST00000538834 CDC42P60953 191 aa11.53□□□□□ -0.56
CD9-208ENST00000538834 GABPB1Q06547 395 aaPredicted RBP11.53□□□□□ -0.56
CD9-208ENST00000538834 EGR3Q06889 387 aa11.53□□□□□ -0.56
CD9-208ENST00000538834 POU4F2Q12837 409 aa11.53□□□□□ -0.56
CD9-208ENST00000538834 TMEM155Q4W5P6 130 aa11.53□□□□□ -0.56
CD9-208ENST00000538834 FAM76BQ5HYJ3 339 aa11.53□□□□□ -0.56
CD9-208ENST00000538834 ZBTB49Q6ZSB9 765 aa11.53□□□□□ -0.56
CD9-208ENST00000538834 SSX6Q7RTT6 188 aa11.53□□□□□ -0.56
CD9-208ENST00000538834 C11orf53Q8IXP5 236 aa11.53□□□□□ -0.56
CD9-208ENST00000538834 SLC35F2Q8IXU6 374 aa11.53□□□□□ -0.56
CD9-208ENST00000538834 LINC01356Q8N9X3 169 aa11.53□□□□□ -0.56
CD9-208ENST00000538834 RHOXF1Q8NHV9 184 aa11.53□□□□□ -0.56
CD9-208ENST00000538834 RAB1CQ92928 201 aa11.53□□□□□ -0.56
CD9-208ENST00000538834 REEP6Q96HR9 211 aa11.53□□□□□ -0.56
CD9-208ENST00000538834 RDH12Q96NR8 316 aa11.53□□□□□ -0.56
CD9-208ENST00000538834 G6PC2Q9NQR9 355 aa11.53□□□□□ -0.56
CD9-208ENST00000538834 YAE1D1Q9NRH1 226 aa11.53□□□□□ -0.56
CD9-208ENST00000538834 FAM118AQ9NWS6 357 aa11.53□□□□□ -0.56
CD9-208ENST00000538834 H2AFY2Q9P0M6 372 aaPredicted RBP11.53□□□□□ -0.56
CD9-208ENST00000538834 NUFIP1Q9UHK0 495 aaKnown RBP11.53□□□□□ -0.56
CD9-208ENST00000538834 MRM2Q9UI43 246 aaKnown RBP11.53□□□□□ -0.56
CD9-208ENST00000538834 PPP1R3CQ9UQK1 317 aa11.53□□□□□ -0.56
CD9-208ENST00000538834 ATRQ13535 2644 aa11.52□□□□□ -0.57
CD9-208ENST00000538834 B4DSR2 109 aa11.52□□□□□ -0.57
CD9-208ENST00000538834 PHYHO14832 338 aa11.52□□□□□ -0.57
CD9-208ENST00000538834 CASQ2O14958 399 aaPredicted RBP11.52□□□□□ -0.57
CD9-208ENST00000538834 TPD52L2O43399 206 aaKnown RBP11.52□□□□□ -0.57
CD9-208ENST00000538834 CST4P01036 141 aa11.52□□□□□ -0.57
CD9-208ENST00000538834 ANXA2P07355 339 aaKnown RBP11.52□□□□□ -0.57
CD9-208ENST00000538834 OR2T7P0C7T2 308 aa11.52□□□□□ -0.57
CD9-208ENST00000538834 CA6P23280 308 aa11.52□□□□□ -0.57
CD9-208ENST00000538834 CXCR4P61073 352 aa11.52□□□□□ -0.57
CD9-208ENST00000538834 MVKQ03426 396 aa11.52□□□□□ -0.57
CD9-208ENST00000538834 ZMYND11Q15326 602 aa11.52□□□□□ -0.57
CD9-208ENST00000538834 ZSCAN26Q16670 478 aa11.52□□□□□ -0.57
CD9-208ENST00000538834 ZIK1Q3SY52 487 aaPredicted RBP11.52□□□□□ -0.57
CD9-208ENST00000538834 AVPI1Q5T686 147 aa11.52□□□□□ -0.57
CD9-208ENST00000538834 MEDAGQ5VYS4 303 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms