RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 GMDSO60547 372 aa11.5□□□□□ -0.57
SMARCA4-206ENST00000538456 PTP4A3O75365 173 aa11.5□□□□□ -0.57
SMARCA4-206ENST00000538456 PPP1R3DO95685 299 aa11.5□□□□□ -0.57
SMARCA4-206ENST00000538456 PTBP3O95758 552 aaKnown RBP11.5□□□□□ -0.57
SMARCA4-206ENST00000538456 PAHP00439 452 aa11.5□□□□□ -0.57
SMARCA4-206ENST00000538456 ANOS1P23352 680 aa11.5□□□□□ -0.57
SMARCA4-206ENST00000538456 FXYD6P3P58550 94 aa11.5□□□□□ -0.57
SMARCA4-206ENST00000538456 ZNF92Q03936 586 aa11.5□□□□□ -0.57
SMARCA4-206ENST00000538456 ECH1Q13011 328 aa11.5□□□□□ -0.57
SMARCA4-206ENST00000538456 KLRD1Q13241 179 aa11.5□□□□□ -0.57
SMARCA4-206ENST00000538456 HERPUD1Q15011 391 aa11.5□□□□□ -0.57
SMARCA4-206ENST00000538456 SNAI3Q3KNW1 292 aa11.5□□□□□ -0.57
SMARCA4-206ENST00000538456 IFI44LQ53G44 452 aa11.5□□□□□ -0.57
SMARCA4-206ENST00000538456 FGD3Q5JSP0 725 aa11.5□□□□□ -0.57
SMARCA4-206ENST00000538456 FKBP9P1Q75LS8 142 aa11.5□□□□□ -0.57
SMARCA4-206ENST00000538456 REC114Q7Z4M0 266 aa11.5□□□□□ -0.57
SMARCA4-206ENST00000538456 OR6V1Q8N148 313 aa11.5□□□□□ -0.57
SMARCA4-206ENST00000538456 PNKDQ8N490 385 aa11.5□□□□□ -0.57
SMARCA4-206ENST00000538456 GALNT4Q8N4A0 578 aa11.5□□□□□ -0.57
SMARCA4-206ENST00000538456 OR2AJ1Q8NGZ0 328 aa11.5□□□□□ -0.57
SMARCA4-206ENST00000538456 SLC7A13Q8TCU3 470 aa11.5□□□□□ -0.57
SMARCA4-206ENST00000538456 GPX7Q96SL4 187 aaPredicted RBP11.5□□□□□ -0.57
SMARCA4-206ENST00000538456 RNASEK-C17orf49H0YIS7 233 aa11.49□□□□□ -0.57
SMARCA4-206ENST00000538456 M0R135 149 aa11.49□□□□□ -0.57
SMARCA4-206ENST00000538456 NPFFO15130 113 aa11.49□□□□□ -0.57
SMARCA4-206ENST00000538456 FAM107AO95990 144 aa11.49□□□□□ -0.57
SMARCA4-206ENST00000538456 HLA-DQA2P01906 255 aa11.49□□□□□ -0.57
SMARCA4-206ENST00000538456 EEF1B2P24534 225 aaKnown RBP11.49□□□□□ -0.57
SMARCA4-206ENST00000538456 RPS6KA3P51812 740 aa11.49□□□□□ -0.57
SMARCA4-206ENST00000538456 TPTEP56180 551 aa11.49□□□□□ -0.57
SMARCA4-206ENST00000538456 DPY19L2P2Q6ZN68 376 aa11.49□□□□□ -0.57
SMARCA4-206ENST00000538456 C1orf122Q6ZSJ8 110 aa11.49□□□□□ -0.57
SMARCA4-206ENST00000538456 FAM216BQ8N7L0 139 aa11.49□□□□□ -0.57
SMARCA4-206ENST00000538456 PLPP7Q8NBV4 271 aa11.49□□□□□ -0.57
SMARCA4-206ENST00000538456 ZNF799Q96GE5 643 aa11.49□□□□□ -0.57
SMARCA4-206ENST00000538456 HSH2DQ96JZ2 352 aa11.49□□□□□ -0.57
SMARCA4-206ENST00000538456 ERMAPQ96PL5 475 aaPredicted RBP11.49□□□□□ -0.57
SMARCA4-206ENST00000538456 NMNAT3Q96T66 252 aa11.49□□□□□ -0.57
SMARCA4-206ENST00000538456 CCL13Q99616 98 aa11.49□□□□□ -0.57
SMARCA4-206ENST00000538456 NSRP1Q9H0G5 558 aaKnown RBP11.49□□□□□ -0.57
SMARCA4-206ENST00000538456 FN3KQ9H479 309 aa11.49□□□□□ -0.57
SMARCA4-206ENST00000538456 PNRC2Q9NPJ4 139 aaKnown RBP11.49□□□□□ -0.57
SMARCA4-206ENST00000538456 RPRD1BQ9NQG5 326 aaKnown RBP11.49□□□□□ -0.57
SMARCA4-206ENST00000538456 ADA2Q9NZK5 511 aa11.49□□□□□ -0.57
SMARCA4-206ENST00000538456 B9D1Q9UPM9 204 aa11.49□□□□□ -0.57
SMARCA4-206ENST00000538456 FOXJ3Q9UPW0 622 aa11.49□□□□□ -0.57
SMARCA4-206ENST00000538456 RYR3Q15413 4870 aa11.48□□□□□ -0.57
SMARCA4-206ENST00000538456 LOC100653049A0A140TA62 436 aa11.48□□□□□ -0.57
SMARCA4-206ENST00000538456 MEIOCA2RUB1 952 aa11.48□□□□□ -0.57
SMARCA4-206ENST00000538456 BBIP1A8MTZ0 92 aa11.48□□□□□ -0.57
SMARCA4-206ENST00000538456 GPR37O15354 613 aa11.48□□□□□ -0.57
SMARCA4-206ENST00000538456 KRT34O76011 436 aa11.48□□□□□ -0.57
SMARCA4-206ENST00000538456 TXNDC12O95881 172 aa11.48□□□□□ -0.57
SMARCA4-206ENST00000538456 NPPAP01160 153 aa11.48□□□□□ -0.57
SMARCA4-206ENST00000538456 TROVE2P10155 538 aaKnown RBP eCLIP11.48□□□□□ -0.57
SMARCA4-206ENST00000538456 SAA4P35542 130 aa11.48□□□□□ -0.57
SMARCA4-206ENST00000538456 GUCA2AQ02747 115 aa11.48□□□□□ -0.57
SMARCA4-206ENST00000538456 IKZF1Q13422 519 aa11.48□□□□□ -0.57
SMARCA4-206ENST00000538456 PCK2Q16822 640 aa11.48□□□□□ -0.57
SMARCA4-206ENST00000538456 RFX4Q33E94 735 aa11.48□□□□□ -0.57
SMARCA4-206ENST00000538456 COQ5Q5HYK3 327 aa11.48□□□□□ -0.57
SMARCA4-206ENST00000538456 WDR38Q5JTN6 314 aa11.48□□□□□ -0.57
SMARCA4-206ENST00000538456 GLYATL3Q5SZD4 288 aa11.48□□□□□ -0.57
SMARCA4-206ENST00000538456 TEX36Q5VZQ5 186 aa11.48□□□□□ -0.57
SMARCA4-206ENST00000538456 METTL21CQ5VZV1 264 aa11.48□□□□□ -0.57
SMARCA4-206ENST00000538456 METAP1DQ6UB28 335 aaPredicted RBP11.48□□□□□ -0.57
SMARCA4-206ENST00000538456 TSEN54Q7Z6J9 526 aaKnown RBP11.48□□□□□ -0.57
SMARCA4-206ENST00000538456 CYP4Z1Q86W10 505 aa11.48□□□□□ -0.57
SMARCA4-206ENST00000538456 CMTM4Q8IZR5 234 aa11.48□□□□□ -0.57
SMARCA4-206ENST00000538456 OR5R1Q8NH85 324 aa11.48□□□□□ -0.57
SMARCA4-206ENST00000538456 PPP1R35Q8TAP8 253 aa11.48□□□□□ -0.57
SMARCA4-206ENST00000538456 BCAS4Q8TDM0 211 aa11.48□□□□□ -0.57
SMARCA4-206ENST00000538456 NPRL2Q8WTW4 380 aa11.48□□□□□ -0.57
SMARCA4-206ENST00000538456 LRRC29Q8WV35 223 aa11.48□□□□□ -0.57
SMARCA4-206ENST00000538456 ITPKCQ96DU7 683 aa11.48□□□□□ -0.57
SMARCA4-206ENST00000538456 ANKRD19PQ9H560 264 aa11.48□□□□□ -0.57
SMARCA4-206ENST00000538456 GID8Q9NWU2 228 aa11.48□□□□□ -0.57
SMARCA4-206ENST00000538456 MRPL15Q9P015 296 aaKnown RBP11.48□□□□□ -0.57
SMARCA4-206ENST00000538456 KAAG1Q9UBP8 84 aa11.48□□□□□ -0.57
SMARCA4-206ENST00000538456 FBLN5Q9UBX5 448 aa11.48□□□□□ -0.57
SMARCA4-206ENST00000538456 CYB5R1Q9UHQ9 305 aa11.48□□□□□ -0.57
SMARCA4-206ENST00000538456 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.47□□□□□ -0.57
SMARCA4-206ENST00000538456 UNC119BA6NIH7 251 aa11.47□□□□□ -0.57
SMARCA4-206ENST00000538456 H3BUX3 64 aa11.47□□□□□ -0.57
SMARCA4-206ENST00000538456 BHLHE40O14503 412 aa11.47□□□□□ -0.57
SMARCA4-206ENST00000538456 NDUFAB1O14561 156 aa11.47□□□□□ -0.57
SMARCA4-206ENST00000538456 EDF1O60869 148 aaKnown RBP11.47□□□□□ -0.57
SMARCA4-206ENST00000538456 RENP00797 406 aa11.47□□□□□ -0.57
SMARCA4-206ENST00000538456 SERPINA1P01009 418 aa11.47□□□□□ -0.57
SMARCA4-206ENST00000538456 LHBP01229 141 aa11.47□□□□□ -0.57
SMARCA4-206ENST00000538456 H1F0P07305 194 aaKnown RBP11.47□□□□□ -0.57
SMARCA4-206ENST00000538456 RPS27P42677 84 aaKnown RBP11.47□□□□□ -0.57
SMARCA4-206ENST00000538456 OMPP47874 163 aa11.47□□□□□ -0.57
SMARCA4-206ENST00000538456 KLF10Q13118 480 aa11.47□□□□□ -0.57
SMARCA4-206ENST00000538456 MICBQ29980 383 aa11.47□□□□□ -0.57
SMARCA4-206ENST00000538456 C11orf91Q3C1V1 193 aa11.47□□□□□ -0.57
SMARCA4-206ENST00000538456 SLC36A3Q495N2 470 aa11.47□□□□□ -0.57
SMARCA4-206ENST00000538456 OXLD1Q5BKU9 147 aa11.47□□□□□ -0.57
SMARCA4-206ENST00000538456 SMARCD3Q6STE5 483 aa11.47□□□□□ -0.57
SMARCA4-206ENST00000538456 CPLX4Q7Z7G2 160 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms