RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 AMY2AP04746 511 aa12.33□□□□□ -0.44
LIMK1-208ENST00000538333 RFPL3SP0C7P2 107 aa12.33□□□□□ -0.44
LIMK1-208ENST00000538333 GUCA1AP43080 201 aaPredicted RBP12.33□□□□□ -0.44
LIMK1-208ENST00000538333 TSPAN5P62079 268 aa12.33□□□□□ -0.44
LIMK1-208ENST00000538333 CDNFQ49AH0 187 aa12.33□□□□□ -0.44
LIMK1-208ENST00000538333 ACER2Q5QJU3 275 aa12.33□□□□□ -0.44
LIMK1-208ENST00000538333 OR2W3Q7Z3T1 314 aa12.33□□□□□ -0.44
LIMK1-208ENST00000538333 DTX1Q86Y01 620 aa12.33□□□□□ -0.44
LIMK1-208ENST00000538333 ZNF584Q8IVC4 421 aa12.33□□□□□ -0.44
LIMK1-208ENST00000538333 UXS1Q8NBZ7 420 aa12.33□□□□□ -0.44
LIMK1-208ENST00000538333 OR2AK2Q8NG84 335 aa12.33□□□□□ -0.44
LIMK1-208ENST00000538333 OR4S1Q8NGB4 309 aa12.33□□□□□ -0.44
LIMK1-208ENST00000538333 INTS12Q96CB8 462 aaKnown RBP12.33□□□□□ -0.44
LIMK1-208ENST00000538333 ZNF837Q96EG3 531 aaPredicted RBP12.33□□□□□ -0.44
LIMK1-208ENST00000538333 TAAR9Q96RI9 348 aa12.33□□□□□ -0.44
LIMK1-208ENST00000538333 SLC6A7Q99884 636 aa12.33□□□□□ -0.44
LIMK1-208ENST00000538333 LPAR5Q9H1C0 372 aa12.33□□□□□ -0.44
LIMK1-208ENST00000538333 OPN4Q9UHM6 478 aa12.33□□□□□ -0.44
LIMK1-208ENST00000538333 OR14I1A6ND48 311 aa12.32□□□□□ -0.44
LIMK1-208ENST00000538333 OR5H15A6NDH6 313 aa12.32□□□□□ -0.44
LIMK1-208ENST00000538333 SERPINA7P05543 415 aa12.32□□□□□ -0.44
LIMK1-208ENST00000538333 NTF4P34130 210 aa12.32□□□□□ -0.44
LIMK1-208ENST00000538333 GNG2P59768 71 aa12.32□□□□□ -0.44
LIMK1-208ENST00000538333 GLIPR1L1Q6UWM5 242 aa12.32□□□□□ -0.44
LIMK1-208ENST00000538333 Q6ZSR3 168 aa12.32□□□□□ -0.44
LIMK1-208ENST00000538333 BPIFB2Q8N4F0 458 aa12.32□□□□□ -0.44
LIMK1-208ENST00000538333 ESX1Q8N693 406 aa12.32□□□□□ -0.44
LIMK1-208ENST00000538333 TMEM104Q8NE00 496 aa12.32□□□□□ -0.44
LIMK1-208ENST00000538333 OR13C8Q8NGS7 320 aa12.32□□□□□ -0.44
LIMK1-208ENST00000538333 KCNE4Q8WWG9 221 aa12.32□□□□□ -0.44
LIMK1-208ENST00000538333 SLC39A7Q92504 469 aa12.32□□□□□ -0.44
LIMK1-208ENST00000538333 PSMF1Q92530 271 aa12.32□□□□□ -0.44
LIMK1-208ENST00000538333 DDA1Q9BW61 102 aa12.32□□□□□ -0.44
LIMK1-208ENST00000538333 RBM24Q9BX46 236 aaKnown RBP12.32□□□□□ -0.44
LIMK1-208ENST00000538333 TMPRSS13Q9BYE2 586 aa12.32□□□□□ -0.44
LIMK1-208ENST00000538333 STRADBQ9C0K7 418 aa12.32□□□□□ -0.44
LIMK1-208ENST00000538333 POFUT1Q9H488 388 aa12.32□□□□□ -0.44
LIMK1-208ENST00000538333 MYOZ1Q9NP98 299 aaPredicted RBP12.32□□□□□ -0.44
LIMK1-208ENST00000538333 DEPPQ9NTK1 212 aa12.32□□□□□ -0.44
LIMK1-208ENST00000538333 P4HTMQ9NXG6 502 aa12.32□□□□□ -0.44
LIMK1-208ENST00000538333 SLC2A8Q9NY64 477 aa12.32□□□□□ -0.44
LIMK1-208ENST00000538333 UPB1Q9UBR1 384 aa12.32□□□□□ -0.44
LIMK1-208ENST00000538333 MRPS28Q9Y2Q9 187 aaKnown RBP12.32□□□□□ -0.44
LIMK1-208ENST00000538333 A0A0A6YYD4 124 aa12.32□□□□□ -0.44
LIMK1-208ENST00000538333 A0A0U1RQV5 110 aa12.32□□□□□ -0.44
LIMK1-208ENST00000538333 TMEM82A0PJX8 343 aa12.32□□□□□ -0.44
LIMK1-208ENST00000538333 C9orf172C9J069 976 aa12.32□□□□□ -0.44
LIMK1-208ENST00000538333 SP9P0CG40 484 aa12.32□□□□□ -0.44
LIMK1-208ENST00000538333 OR3A4PP47883 348 aa12.32□□□□□ -0.44
LIMK1-208ENST00000538333 UBE2MP61081 183 aaKnown RBP12.32□□□□□ -0.44
LIMK1-208ENST00000538333 GFOD2Q3B7J2 385 aa12.32□□□□□ -0.44
LIMK1-208ENST00000538333 CRIP3Q6Q6R5 217 aa12.32□□□□□ -0.44
LIMK1-208ENST00000538333 TRAPPC6BQ86SZ2 158 aa12.32□□□□□ -0.44
LIMK1-208ENST00000538333 RTN4RL2Q86UN3 420 aa12.32□□□□□ -0.44
LIMK1-208ENST00000538333 LRRC18Q8N456 261 aa12.32□□□□□ -0.44
LIMK1-208ENST00000538333 GVQW1Q8N7I0 195 aa12.32□□□□□ -0.44
LIMK1-208ENST00000538333 CHST4Q8NCG5 386 aa12.32□□□□□ -0.44
LIMK1-208ENST00000538333 OR10R2Q8NGX6 335 aa12.32□□□□□ -0.44
LIMK1-208ENST00000538333 NUDCD2Q8WVJ2 157 aa12.32□□□□□ -0.44
LIMK1-208ENST00000538333 PNPLA2Q96AD5 504 aa12.32□□□□□ -0.44
LIMK1-208ENST00000538333 PGAM5Q96HS1 289 aa12.32□□□□□ -0.44
LIMK1-208ENST00000538333 ADGRG7Q96K78 797 aa12.32□□□□□ -0.44
LIMK1-208ENST00000538333 NICN1Q9BSH3 213 aa12.32□□□□□ -0.44
LIMK1-208ENST00000538333 ULBP2Q9BZM5 246 aa12.32□□□□□ -0.44
LIMK1-208ENST00000538333 B3GNT2Q9NY97 397 aa12.32□□□□□ -0.44
LIMK1-208ENST00000538333 FLVCR1Q9Y5Y0 555 aa12.32□□□□□ -0.44
LIMK1-208ENST00000538333 MYO7BQ6PIF6 2116 aa12.31□□□□□ -0.44
LIMK1-208ENST00000538333 A0A1W2PNU3 283 aaPredicted RBP12.31□□□□□ -0.44
LIMK1-208ENST00000538333 ZNF716A6NP11 495 aa12.31□□□□□ -0.44
LIMK1-208ENST00000538333 F5H5K5 113 aa12.31□□□□□ -0.44
LIMK1-208ENST00000538333 SLC22A5O76082 557 aa12.31□□□□□ -0.44
LIMK1-208ENST00000538333 GNB3P16520 340 aa12.31□□□□□ -0.44
LIMK1-208ENST00000538333 MPZP25189 248 aa12.31□□□□□ -0.44
LIMK1-208ENST00000538333 MRPS34P82930 218 aaKnown RBP12.31□□□□□ -0.44
LIMK1-208ENST00000538333 MEF2DQ14814 521 aa12.31□□□□□ -0.44
LIMK1-208ENST00000538333 ATPAF1Q5TC12 328 aaPredicted RBP12.31□□□□□ -0.44
LIMK1-208ENST00000538333 FAM27BQ5VT28 67 aa12.31□□□□□ -0.44
LIMK1-208ENST00000538333 CHMP1BQ7LBR1 199 aa12.31□□□□□ -0.44
LIMK1-208ENST00000538333 OR14L1PQ8NHC6 308 aa12.31□□□□□ -0.44
LIMK1-208ENST00000538333 FBXO17Q96EF6 278 aa12.31□□□□□ -0.44
LIMK1-208ENST00000538333 SELENOIQ9C0D9 397 aa12.31□□□□□ -0.44
LIMK1-208ENST00000538333 H3BUI4 141 aa12.3□□□□□ -0.44
LIMK1-208ENST00000538333 SSX5O60225 188 aa12.3□□□□□ -0.44
LIMK1-208ENST00000538333 SIX6O95475 246 aa12.3□□□□□ -0.44
LIMK1-208ENST00000538333 OR4E1P0C645 316 aa12.3□□□□□ -0.44
LIMK1-208ENST00000538333 PRF1P14222 555 aa12.3□□□□□ -0.44
LIMK1-208ENST00000538333 EIF3IQ13347 325 aaKnown RBP12.3□□□□□ -0.44
LIMK1-208ENST00000538333 ZNF528Q3MIS6 628 aa12.3□□□□□ -0.44
LIMK1-208ENST00000538333 SLC22A6Q4U2R8 563 aa12.3□□□□□ -0.44
LIMK1-208ENST00000538333 C4orf46Q504U0 113 aa12.3□□□□□ -0.44
LIMK1-208ENST00000538333 DCAF12L2Q5VW00 463 aa12.3□□□□□ -0.44
LIMK1-208ENST00000538333 ZNF101Q8IZC7 436 aa12.3□□□□□ -0.44
LIMK1-208ENST00000538333 CCDC107Q8WV48 283 aa12.3□□□□□ -0.44
LIMK1-208ENST00000538333 MRGPRFQ96AM1 343 aa12.3□□□□□ -0.44
LIMK1-208ENST00000538333 DPCDQ9BVM2 203 aaPredicted RBP12.3□□□□□ -0.44
LIMK1-208ENST00000538333 ZNF224Q9NZL3 707 aa12.3□□□□□ -0.44
LIMK1-208ENST00000538333 MRPS18CQ9Y3D5 142 aaKnown RBP12.3□□□□□ -0.44
LIMK1-208ENST00000538333 V9GYS6 101 aa12.3□□□□□ -0.44
LIMK1-208ENST00000538333 M0R296 226 aa12.3□□□□□ -0.44
LIMK1-208ENST00000538333 CDC14BO60729 498 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms