RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 NDRG3Q9UGV2 375 aa3.76□□□□□ -1.81
SNHG1-208ENST00000538266 KLHL21Q9UJP4 597 aa3.76□□□□□ -1.81
SNHG1-208ENST00000538266 POU2F3Q9UKI9 436 aa3.76□□□□□ -1.81
SNHG1-208ENST00000538266 POLR1DQ9Y2S0 133 aa3.76□□□□□ -1.81
SNHG1-208ENST00000538266 DIDO1Q9BTC0 2240 aaKnown RBP3.76□□□□□ -1.81
SNHG1-208ENST00000538266 ZFHX4Q86UP3 3567 aa3.76□□□□□ -1.81
SNHG1-208ENST00000538266 INTS1Q8N201 2190 aaKnown RBP3.76□□□□□ -1.81
SNHG1-208ENST00000538266 BOD1L1Q8NFC6 3051 aa3.76□□□□□ -1.81
SNHG1-208ENST00000538266 HIVEP3Q5T1R4 2406 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 SLC22A23A1A5C7 686 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 CLEC18AA5D8T8 446 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 OR5H1A6NKK0 313 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 H0YIZ8 118 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 RPL36A-HNRNPH2H7BZ11 118 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 H7C1C5 153 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 CASKO14936 926 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 DHHO43323 396 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 MPZL2O60487 215 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 SLC16A7O60669 478 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 KHDRBS3O75525 346 aaKnown RBP3.75□□□□□ -1.81
SNHG1-208ENST00000538266 UPK3AO75631 287 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 SLC2A10O95528 541 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 TXNDC12O95881 172 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 HLA-DQA2P01906 255 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 ITGA5P08648 1049 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 IGFBP1P08833 259 aaPredicted RBP3.75□□□□□ -1.81
SNHG1-208ENST00000538266 NPSP0C0P6 89 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 RNF224P0DH78 156 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 OR8G3PP0DMU2 310 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 PIPP12273 146 aaPredicted RBP3.75□□□□□ -1.81
SNHG1-208ENST00000538266 COX6B1P14854 86 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 B4GALT1P15291 398 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 HIST1H1CP16403 213 aaKnown RBP3.75□□□□□ -1.81
SNHG1-208ENST00000538266 PSMB1P20618 241 aaKnown RBP3.75□□□□□ -1.81
SNHG1-208ENST00000538266 COX5AP20674 150 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 EDNRAP25101 427 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 CCKARP32238 428 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 GRK5P34947 590 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 RCVRNP35243 200 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 TGFBR1P36897 503 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 DDOSTP39656 456 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 NR4A2P43354 598 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 RGS6P49758 472 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 NKX2-5P52952 324 aaPredicted RBP3.75□□□□□ -1.81
SNHG1-208ENST00000538266 CRISP1P54107 249 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 CDC42P60953 191 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 LCN6P62502 163 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 ARF1P84077 181 aaKnown RBP3.75□□□□□ -1.81
SNHG1-208ENST00000538266 IFITM2Q01629 132 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 GLO1Q04760 184 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 RUNX1T1Q06455 604 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 FMODQ06828 376 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 TFF3Q07654 80 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 FAM27E3Q08E93 113 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 CRMP1Q14194 572 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 IRF3Q14653 427 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 PTGES3Q15185 160 aaKnown RBP3.75□□□□□ -1.81
SNHG1-208ENST00000538266 SNAPC1Q16533 368 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 SLC36A2Q495M3 483 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 MESTQ5EB52 335 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 ARMCX4Q5H9R4 360 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 C6orf183Q5T699 404 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 MZT2AQ6P582 158 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 CLEC18BQ6UXF7 455 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 CCBE1Q6UXH8 406 aaPredicted RBP3.75□□□□□ -1.81
SNHG1-208ENST00000538266 STAC2Q6ZMT1 411 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 MEX3BQ6ZN04 569 aaKnown RBP3.75□□□□□ -1.81
SNHG1-208ENST00000538266 ZNF813Q6ZN06 617 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 DPPA2Q7Z7J5 298 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 CCDC190Q86UF4 302 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 CCDC36Q8IYA8 594 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 C17orf78Q8N4C9 275 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 OR2C3Q8N628 320 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 ZNF433Q8N7K0 673 aaPredicted RBP3.75□□□□□ -1.81
SNHG1-208ENST00000538266 C11orf44Q8N8P7 122 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 ASCC1Q8N9N2 400 aaKnown RBP3.75□□□□□ -1.81
SNHG1-208ENST00000538266 BOLLQ8N9W6 283 aaKnown RBP3.75□□□□□ -1.81
SNHG1-208ENST00000538266 CYB561A3Q8NBI2 242 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 CLEC18CQ8NCF0 446 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 SDR9C7Q8NEX9 313 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 PROKR2Q8NFJ6 384 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 OR8D4Q8NGM9 314 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 OR6K6Q8NGW6 343 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 GRPEL2Q8TAA5 225 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 GGHQ92820 318 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 TMEM54Q969K7 222 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 TRIM63Q969Q1 353 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 MCHR2Q969V1 340 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 S100PBPQ96BU1 408 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 ZC3HAV1LQ96H79 300 aaKnown RBP3.75□□□□□ -1.81
SNHG1-208ENST00000538266 NMNAT3Q96T66 252 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 SLC30A2Q9BRI3 323 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 CHCHD6Q9BRQ6 235 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 RHNO1Q9BSD3 238 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 MRPL13Q9BYD1 178 aaKnown RBP3.75□□□□□ -1.81
SNHG1-208ENST00000538266 OR10A4Q9H209 315 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 KCNN2Q9H2S1 579 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 SLC25A19Q9HC21 320 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 OBP2BQ9NPH6 170 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 RPRD1BQ9NQG5 326 aaKnown RBP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms