RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 C10orf142B7Z368 130 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 RNF223E7ERA6 249 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 SURF4O15260 269 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 ENSAO43768 121 aaKnown RBP6.29□□□□□ -1.4
MSH6-209ENST00000538136 DNASE1P24855 282 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 LCN1P31025 176 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 UGT2B10P36537 528 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 TGFBR1P36897 503 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 ETV1P50549 477 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 C22orf34Q6ZV56 151 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 C11orf44Q8N8P7 122 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 NPEPL1Q8NDH3 523 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 OR51A4Q8NGJ6 313 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 OR11L1Q8NGX0 322 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 USB1Q9BQ65 265 aaKnown RBP6.29□□□□□ -1.4
MSH6-209ENST00000538136 OR2H1Q9GZK4 316 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 RAB1BQ9H0U4 201 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 CXorf56Q9H5V9 222 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 YAE1D1Q9NRH1 226 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 KCNS2Q9ULS6 477 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 BAIAP2Q9UQB8 552 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 METTL15A6NJ78 407 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 TRAPPC2LH3BP13 241 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 CYC1P08574 325 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 ASAH2BP0C7U1 165 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 CPN1P15169 458 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 PRKACAP17612 351 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 OR3A2P47893 321 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 UCP2P55851 309 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 B3GALT5-AS1P59052 145 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 PSPHP78330 225 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 AQP6Q13520 282 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 KDM4DQ6B0I6 523 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 SPNS3Q6ZMD2 512 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 SEMA6DQ8NFY4 1073 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 GTF3AQ92664 365 aaKnown RBP6.29□□□□□ -1.4
MSH6-209ENST00000538136 EMG1Q92979 244 aaKnown RBP6.29□□□□□ -1.4
MSH6-209ENST00000538136 ZDHHC16Q969W1 377 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 MAP6Q96JE9 813 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 HRASLS5Q96KN8 279 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 HS3ST6Q96QI5 342 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 ATG5Q9H1Y0 275 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 TUBD1Q9UJT1 453 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 NCOA6Q14686 2063 aaPredicted RBP6.29□□□□□ -1.4
MSH6-209ENST00000538136 CD300LBA8K4G0 201 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 DEFB108AA8MXU0 73 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 LMX1BO60663 402 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 UBL3O95164 117 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 CNOT4O95628 575 aaKnown RBP6.29□□□□□ -1.4
MSH6-209ENST00000538136 EPXP11678 715 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 PLA2G2AP14555 144 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 RPS2P15880 293 aaKnown RBP6.29□□□□□ -1.4
MSH6-209ENST00000538136 SOX6P35712 828 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 GPR6P46095 362 aaPredicted RBP6.29□□□□□ -1.4
MSH6-209ENST00000538136 NCS1P62166 190 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 LCN2P80188 198 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 TAGLNQ01995 201 aaKnown RBP6.29□□□□□ -1.4
MSH6-209ENST00000538136 RNF165Q6ZSG1 346 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 TMEM17Q86X19 198 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 BPIFB2Q8N4F0 458 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 OR1K1Q8NGR3 316 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 OR51F2Q8NH61 342 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 SLAMF9Q96A28 289 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 ZNF764Q96H86 408 aaPredicted RBP6.29□□□□□ -1.4
MSH6-209ENST00000538136 OR2V2Q96R30 315 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 ST6GALNAC5Q9BVH7 336 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 SELENOIQ9C0D9 397 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 PBOV1Q9GZY1 135 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 KCNK15Q9H427 330 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 LRBAP50851 2863 aa6.29□□□□□ -1.4
MSH6-209ENST00000538136 DPRXA6NFQ7 191 aa6.28□□□□□ -1.4
MSH6-209ENST00000538136 FAM157AC9JC47 383 aa6.28□□□□□ -1.4
MSH6-209ENST00000538136 NRASP01111 189 aa6.28□□□□□ -1.4
MSH6-209ENST00000538136 GAS1P54826 345 aa6.28□□□□□ -1.4
MSH6-209ENST00000538136 DLX1P56177 255 aa6.28□□□□□ -1.4
MSH6-209ENST00000538136 FXYD4P59646 89 aa6.28□□□□□ -1.4
MSH6-209ENST00000538136 NAAAQ02083 359 aa6.28□□□□□ -1.4
MSH6-209ENST00000538136 ZNF92Q03936 586 aa6.28□□□□□ -1.4
MSH6-209ENST00000538136 SNAI3Q3KNW1 292 aa6.28□□□□□ -1.4
MSH6-209ENST00000538136 MEDAGQ5VYS4 303 aa6.28□□□□□ -1.4
MSH6-209ENST00000538136 RBMS3Q6XE24 437 aaKnown RBP6.28□□□□□ -1.4
MSH6-209ENST00000538136 LINGO2Q7L985 606 aa6.28□□□□□ -1.4
MSH6-209ENST00000538136 ZNF525Q8N782 197 aa6.28□□□□□ -1.4
MSH6-209ENST00000538136 ZIC4Q8N9L1 334 aa6.28□□□□□ -1.4
MSH6-209ENST00000538136 OR51T1Q8NGJ9 327 aa6.28□□□□□ -1.4
MSH6-209ENST00000538136 GPR148Q8TDV2 347 aa6.28□□□□□ -1.4
MSH6-209ENST00000538136 LRRC29Q8WV35 223 aa6.28□□□□□ -1.4
MSH6-209ENST00000538136 PPP1R3EQ9H7J1 279 aa6.28□□□□□ -1.4
MSH6-209ENST00000538136 TAS2R4Q9NYW5 299 aa6.28□□□□□ -1.4
MSH6-209ENST00000538136 B3GAT1Q9P2W7 334 aa6.28□□□□□ -1.4
MSH6-209ENST00000538136 DKK4Q9UBT3 224 aa6.28□□□□□ -1.4
MSH6-209ENST00000538136 FAM96BQ9Y3D0 163 aa6.28□□□□□ -1.4
MSH6-209ENST00000538136 KIAA1549LQ6ZVL6 1849 aa6.28□□□□□ -1.4
MSH6-209ENST00000538136 YLPM1P49750 1951 aaKnown RBP6.28□□□□□ -1.4
MSH6-209ENST00000538136 KIAA1549Q9HCM3 1950 aa6.28□□□□□ -1.4
MSH6-209ENST00000538136 ZNF716A6NP11 495 aa6.28□□□□□ -1.4
MSH6-209ENST00000538136 BET1O15155 118 aa6.28□□□□□ -1.4
MSH6-209ENST00000538136 APOC1P02654 83 aa6.28□□□□□ -1.4
MSH6-209ENST00000538136 ZNF26P17031 533 aaPredicted RBP6.28□□□□□ -1.4
MSH6-209ENST00000538136 CD80P33681 288 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms