RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 TMEM255AQ5JRV8 349 aa13.49□□□□□ -0.25
SFSWAP-206ENST00000537582 ASPHD2Q6ICH7 369 aa13.49□□□□□ -0.25
SFSWAP-206ENST00000537582 MS4A15Q8N5U1 240 aa13.49□□□□□ -0.25
SFSWAP-206ENST00000537582 GPR148Q8TDV2 347 aa13.49□□□□□ -0.25
SFSWAP-206ENST00000537582 TSEN15Q8WW01 171 aaKnown RBP13.49□□□□□ -0.25
SFSWAP-206ENST00000537582 TBCCD1Q9NVR7 557 aa13.49□□□□□ -0.25
SFSWAP-206ENST00000537582 CRIM1Q9NZV1 1036 aa13.49□□□□□ -0.25
SFSWAP-206ENST00000537582 FZR1Q9UM11 496 aa13.49□□□□□ -0.25
SFSWAP-206ENST00000537582 HHLA2Q9UM44 414 aa13.49□□□□□ -0.25
SFSWAP-206ENST00000537582 A0A1B0GVI7 797 aa13.48□□□□□ -0.25
SFSWAP-206ENST00000537582 TRDV1A0A1B0GX56 115 aa13.48□□□□□ -0.25
SFSWAP-206ENST00000537582 ZNF879B4DU55 563 aa13.48□□□□□ -0.25
SFSWAP-206ENST00000537582 H3BMQ9 156 aa13.48□□□□□ -0.25
SFSWAP-206ENST00000537582 ICMTO60725 284 aa13.48□□□□□ -0.25
SFSWAP-206ENST00000537582 ATE1O95260 518 aa13.48□□□□□ -0.25
SFSWAP-206ENST00000537582 HLA-DPB1P04440 258 aa13.48□□□□□ -0.25
SFSWAP-206ENST00000537582 OCM2P0CE71 109 aa13.48□□□□□ -0.25
SFSWAP-206ENST00000537582 CCL1P22362 96 aa13.48□□□□□ -0.25
SFSWAP-206ENST00000537582 ACKR3P25106 362 aa13.48□□□□□ -0.25
SFSWAP-206ENST00000537582 PPP1CBP62140 327 aa13.48□□□□□ -0.25
SFSWAP-206ENST00000537582 GK2Q14410 553 aaPredicted RBP13.48□□□□□ -0.25
SFSWAP-206ENST00000537582 MSMPQ1L6U9 139 aa13.48□□□□□ -0.25
SFSWAP-206ENST00000537582 C3orf36Q3SXR2 165 aa13.48□□□□□ -0.25
SFSWAP-206ENST00000537582 TMEM244Q5VVB8 128 aa13.48□□□□□ -0.25
SFSWAP-206ENST00000537582 PIAS4Q8N2W9 510 aaPredicted RBP13.48□□□□□ -0.25
SFSWAP-206ENST00000537582 OR1J1Q8NGS3 322 aa13.48□□□□□ -0.25
SFSWAP-206ENST00000537582 OR13C3Q8NGS6 347 aa13.48□□□□□ -0.25
SFSWAP-206ENST00000537582 OR14K1Q8NGZ2 314 aa13.48□□□□□ -0.25
SFSWAP-206ENST00000537582 NDNFQ8TB73 568 aa13.48□□□□□ -0.25
SFSWAP-206ENST00000537582 RADILQ96JH8 1075 aa13.48□□□□□ -0.25
SFSWAP-206ENST00000537582 DERL3Q96Q80 235 aa13.48□□□□□ -0.25
SFSWAP-206ENST00000537582 OR2J1Q9GZK6 312 aa13.48□□□□□ -0.25
SFSWAP-206ENST00000537582 PPP1R3EQ9H7J1 279 aa13.48□□□□□ -0.25
SFSWAP-206ENST00000537582 NOX4Q9NPH5 578 aa13.48□□□□□ -0.25
SFSWAP-206ENST00000537582 EIF3KQ9UBQ5 218 aaKnown RBP13.48□□□□□ -0.25
SFSWAP-206ENST00000537582 NDRG3Q9UGV2 375 aa13.48□□□□□ -0.25
SFSWAP-206ENST00000537582 SSR3Q9UNL2 185 aa13.48□□□□□ -0.25
SFSWAP-206ENST00000537582 hCG_38984A0A1B0GV85 526 aa13.47□□□□□ -0.25
SFSWAP-206ENST00000537582 SMIM30A4D0T7 59 aa13.47□□□□□ -0.25
SFSWAP-206ENST00000537582 ABCD4O14678 606 aa13.47□□□□□ -0.25
SFSWAP-206ENST00000537582 CRYAAP02489 173 aa13.47□□□□□ -0.25
SFSWAP-206ENST00000537582 TMBIM6P55061 237 aa13.47□□□□□ -0.25
SFSWAP-206ENST00000537582 FAM3AP98173 230 aa13.47□□□□□ -0.25
SFSWAP-206ENST00000537582 SPCS2Q15005 226 aa13.47□□□□□ -0.25
SFSWAP-206ENST00000537582 Q499Y3 187 aa13.47□□□□□ -0.25
SFSWAP-206ENST00000537582 DMRTC1Q5HYR2 192 aa13.47□□□□□ -0.25
SFSWAP-206ENST00000537582 ADAM5Q6NVV9 412 aa13.47□□□□□ -0.25
SFSWAP-206ENST00000537582 TMEM108Q6UXF1 575 aa13.47□□□□□ -0.25
SFSWAP-206ENST00000537582 UNQ9370/PRO34162Q6UXP9 181 aa13.47□□□□□ -0.25
SFSWAP-206ENST00000537582 PLPP7Q8NBV4 271 aa13.47□□□□□ -0.25
SFSWAP-206ENST00000537582 SLC25A40Q8TBP6 338 aa13.47□□□□□ -0.25
SFSWAP-206ENST00000537582 SPSB4Q96A44 273 aa13.47□□□□□ -0.25
SFSWAP-206ENST00000537582 ADAT3Q96EY9 351 aaPredicted RBP13.47□□□□□ -0.25
SFSWAP-206ENST00000537582 PLPPR2Q96GM1 343 aa13.47□□□□□ -0.25
SFSWAP-206ENST00000537582 MOV10Q9HCE1 1003 aaKnown RBP13.47□□□□□ -0.25
SFSWAP-206ENST00000537582 DHDHQ9UQ10 334 aa13.47□□□□□ -0.25
SFSWAP-206ENST00000537582 SPTBN1Q01082 2364 aaKnown RBP13.47□□□□□ -0.25
SFSWAP-206ENST00000537582 DOPEY1Q5JWR5 2465 aa13.47□□□□□ -0.25
SFSWAP-206ENST00000537582 TRAV8-7A0A075B6U6 113 aa13.46□□□□□ -0.25
SFSWAP-206ENST00000537582 TRBV5-7A0A0A0MS05 114 aa13.46□□□□□ -0.25
SFSWAP-206ENST00000537582 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.46□□□□□ -0.25
SFSWAP-206ENST00000537582 NOL3O60936 208 aaKnown RBP13.46□□□□□ -0.25
SFSWAP-206ENST00000537582 LILRA1O75019 489 aa13.46□□□□□ -0.25
SFSWAP-206ENST00000537582 MPV17P39210 176 aa13.46□□□□□ -0.25
SFSWAP-206ENST00000537582 GSK3AP49840 483 aa13.46□□□□□ -0.25
SFSWAP-206ENST00000537582 SNTB2Q13425 540 aaKnown RBP13.46□□□□□ -0.25
SFSWAP-206ENST00000537582 TRAM1Q15629 374 aa13.46□□□□□ -0.25
SFSWAP-206ENST00000537582 C11orf91Q3C1V1 193 aa13.46□□□□□ -0.25
SFSWAP-206ENST00000537582 DOK3Q7L591 496 aa13.46□□□□□ -0.25
SFSWAP-206ENST00000537582 TMEM106AQ96A25 262 aa13.46□□□□□ -0.25
SFSWAP-206ENST00000537582 FGGYQ96C11 551 aa13.46□□□□□ -0.25
SFSWAP-206ENST00000537582 HS3ST6Q96QI5 342 aa13.46□□□□□ -0.25
SFSWAP-206ENST00000537582 SP140LQ9H930 580 aa13.46□□□□□ -0.25
SFSWAP-206ENST00000537582 V9GYS6 101 aa13.46□□□□□ -0.25
SFSWAP-206ENST00000537582 XRCC2O43543 280 aa13.45□□□□□ -0.26
SFSWAP-206ENST00000537582 CLEC2LP0C7M8 214 aa13.45□□□□□ -0.26
SFSWAP-206ENST00000537582 FAHP16930 419 aa13.45□□□□□ -0.26
SFSWAP-206ENST00000537582 PTAFRP25105 342 aa13.45□□□□□ -0.26
SFSWAP-206ENST00000537582 FGF9P31371 208 aaPredicted RBP13.45□□□□□ -0.26
SFSWAP-206ENST00000537582 NKX6-1P78426 367 aaPredicted RBP13.45□□□□□ -0.26
SFSWAP-206ENST00000537582 ALKBH6Q3KRA9 238 aa13.45□□□□□ -0.26
SFSWAP-206ENST00000537582 NCMAPQ5T1S8 102 aa13.45□□□□□ -0.26
SFSWAP-206ENST00000537582 C1QTNF12Q5T7M4 302 aa13.45□□□□□ -0.26
SFSWAP-206ENST00000537582 VHLLQ6RSH7 139 aa13.45□□□□□ -0.26
SFSWAP-206ENST00000537582 MRPL21Q7Z2W9 205 aaKnown RBP13.45□□□□□ -0.26
SFSWAP-206ENST00000537582 DMRTC2Q8IXT2 367 aaPredicted RBP13.45□□□□□ -0.26
SFSWAP-206ENST00000537582 RAB2BQ8WUD1 216 aa13.45□□□□□ -0.26
SFSWAP-206ENST00000537582 NEUROG1Q92886 237 aa13.45□□□□□ -0.26
SFSWAP-206ENST00000537582 DACH2Q96NX9 599 aa13.45□□□□□ -0.26
SFSWAP-206ENST00000537582 REPIN1Q9BWE0 567 aaKnown RBP13.45□□□□□ -0.26
SFSWAP-206ENST00000537582 ZNF275Q9NSD4 429 aaPredicted RBP13.45□□□□□ -0.26
SFSWAP-206ENST00000537582 TAS2R4Q9NYW5 299 aa13.45□□□□□ -0.26
SFSWAP-206ENST00000537582 ANKHD1Q8IWZ3 2542 aaKnown RBP13.45□□□□□ -0.26
SFSWAP-206ENST00000537582 CADP27708 2225 aa13.45□□□□□ -0.26
SFSWAP-206ENST00000537582 COL12A1Q99715 3063 aa13.45□□□□□ -0.26
SFSWAP-206ENST00000537582 DEFB108AA8MXU0 73 aa13.45□□□□□ -0.26
SFSWAP-206ENST00000537582 J3QKU1 62 aa13.45□□□□□ -0.26
SFSWAP-206ENST00000537582 DHRS3O75911 302 aa13.45□□□□□ -0.26
SFSWAP-206ENST00000537582 PLAUP00749 431 aa13.45□□□□□ -0.26
SFSWAP-206ENST00000537582 SERPINA3P01011 423 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms