RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 FAM57BQ71RH2 274 aa11.96□□□□□ -0.49
SMG6-203ENST00000536871 AAED1Q7RTV5 226 aa11.96□□□□□ -0.49
SMG6-203ENST00000536871 GABRG1Q8N1C3 465 aa11.96□□□□□ -0.49
SMG6-203ENST00000536871 OR52N4Q8NGI2 321 aa11.96□□□□□ -0.49
SMG6-203ENST00000536871 OR4D6Q8NGJ1 314 aa11.96□□□□□ -0.49
SMG6-203ENST00000536871 OR13C9Q8NGT0 318 aa11.96□□□□□ -0.49
SMG6-203ENST00000536871 OR10D3Q8NH80 312 aa11.96□□□□□ -0.49
SMG6-203ENST00000536871 LRRC20Q8TCA0 184 aa11.96□□□□□ -0.49
SMG6-203ENST00000536871 ADAMTS17Q8TE56 1095 aa11.96□□□□□ -0.49
SMG6-203ENST00000536871 AQP3Q92482 292 aa11.96□□□□□ -0.49
SMG6-203ENST00000536871 OR10A2Q9H208 303 aa11.96□□□□□ -0.49
SMG6-203ENST00000536871 NARFLQ9H6Q4 476 aa11.96□□□□□ -0.49
SMG6-203ENST00000536871 ZMAT5Q9UDW3 170 aaKnown RBP11.96□□□□□ -0.49
SMG6-203ENST00000536871 TMEM14DPA8MWL7 114 aa11.95□□□□□ -0.5
SMG6-203ENST00000536871 TRIM77I1YAP6 450 aa11.95□□□□□ -0.5
SMG6-203ENST00000536871 FABP7O15540 132 aa11.95□□□□□ -0.5
SMG6-203ENST00000536871 DHRS3O75911 302 aa11.95□□□□□ -0.5
SMG6-203ENST00000536871 PRF1P14222 555 aa11.95□□□□□ -0.5
SMG6-203ENST00000536871 MPZP25189 248 aa11.95□□□□□ -0.5
SMG6-203ENST00000536871 CD96P40200 585 aa11.95□□□□□ -0.5
SMG6-203ENST00000536871 SELENOPP49908 381 aa11.95□□□□□ -0.5
SMG6-203ENST00000536871 FOXO1Q12778 655 aa11.95□□□□□ -0.5
SMG6-203ENST00000536871 PLA2G7Q13093 441 aa11.95□□□□□ -0.5
SMG6-203ENST00000536871 TOR2AQ5JU69 321 aa11.95□□□□□ -0.5
SMG6-203ENST00000536871 ZNF626Q68DY1 528 aa11.95□□□□□ -0.5
SMG6-203ENST00000536871 ZNF584Q8IVC4 421 aa11.95□□□□□ -0.5
SMG6-203ENST00000536871 PIAS4Q8N2W9 510 aaPredicted RBP11.95□□□□□ -0.5
SMG6-203ENST00000536871 OR14K1Q8NGZ2 314 aa11.95□□□□□ -0.5
SMG6-203ENST00000536871 CITED4Q96RK1 184 aa11.95□□□□□ -0.5
SMG6-203ENST00000536871 URM1Q9BTM9 101 aaKnown RBP11.95□□□□□ -0.5
SMG6-203ENST00000536871 MYOZ1Q9NP98 299 aaPredicted RBP11.95□□□□□ -0.5
SMG6-203ENST00000536871 NPDC1Q9NQX5 325 aaPredicted RBP11.95□□□□□ -0.5
SMG6-203ENST00000536871 PARPBPQ9NWS1 579 aa11.95□□□□□ -0.5
SMG6-203ENST00000536871 V9GYS6 101 aa11.95□□□□□ -0.5
SMG6-203ENST00000536871 IGHV3-15A0A0B4J1V0 119 aa11.95□□□□□ -0.5
SMG6-203ENST00000536871 LOC101059948A0A1B0GTJ6 334 aa11.95□□□□□ -0.5
SMG6-203ENST00000536871 DISC1C4P0D8 188 aa11.95□□□□□ -0.5
SMG6-203ENST00000536871 M0R135 149 aa11.95□□□□□ -0.5
SMG6-203ENST00000536871 CXCL13O43927 109 aa11.95□□□□□ -0.5
SMG6-203ENST00000536871 RAB3DO95716 219 aa11.95□□□□□ -0.5
SMG6-203ENST00000536871 CD74P04233 296 aa11.95□□□□□ -0.5
SMG6-203ENST00000536871 GSTP1P09211 210 aaKnown RBP11.95□□□□□ -0.5
SMG6-203ENST00000536871 KLK2P20151 261 aa11.95□□□□□ -0.5
SMG6-203ENST00000536871 ALDH3B1P43353 468 aa11.95□□□□□ -0.5
SMG6-203ENST00000536871 QRFPP83859 136 aa11.95□□□□□ -0.5
SMG6-203ENST00000536871 TMEM255AQ5JRV8 349 aa11.95□□□□□ -0.5
SMG6-203ENST00000536871 ANGPTL5Q86XS5 388 aa11.95□□□□□ -0.5
SMG6-203ENST00000536871 OR2M7Q8NG81 312 aa11.95□□□□□ -0.5
SMG6-203ENST00000536871 ZNF799Q96GE5 643 aa11.95□□□□□ -0.5
SMG6-203ENST00000536871 GINS4Q9BRT9 223 aa11.95□□□□□ -0.5
SMG6-203ENST00000536871 ZNF436Q9C0F3 470 aaPredicted RBP11.95□□□□□ -0.5
SMG6-203ENST00000536871 CST11Q9H112 138 aa11.95□□□□□ -0.5
SMG6-203ENST00000536871 RGCCQ9H4X1 137 aa11.95□□□□□ -0.5
SMG6-203ENST00000536871 TMEM38BQ9NVV0 291 aa11.95□□□□□ -0.5
SMG6-203ENST00000536871 PLEK2Q9NYT0 353 aa11.95□□□□□ -0.5
SMG6-203ENST00000536871 ATPIF1Q9UII2 106 aa11.95□□□□□ -0.5
SMG6-203ENST00000536871 KLF13Q9Y2Y9 288 aaPredicted RBP11.95□□□□□ -0.5
SMG6-203ENST00000536871 IGKV3D-15A0A087WSY6 115 aa11.94□□□□□ -0.5
SMG6-203ENST00000536871 ZNF736B4DX44 427 aaPredicted RBP11.94□□□□□ -0.5
SMG6-203ENST00000536871 RAB27BO00194 218 aa11.94□□□□□ -0.5
SMG6-203ENST00000536871 GALR2O43603 387 aaPredicted RBP11.94□□□□□ -0.5
SMG6-203ENST00000536871 LMX1BO60663 402 aa11.94□□□□□ -0.5
SMG6-203ENST00000536871 GIPP09681 153 aaPredicted RBP11.94□□□□□ -0.5
SMG6-203ENST00000536871 VSIG8P0DPA2 414 aa11.94□□□□□ -0.5
SMG6-203ENST00000536871 PTHLHP12272 177 aa11.94□□□□□ -0.5
SMG6-203ENST00000536871 ZNF260Q3ZCT1 412 aa11.94□□□□□ -0.5
SMG6-203ENST00000536871 WIPI1Q5MNZ9 446 aaPredicted RBP11.94□□□□□ -0.5
SMG6-203ENST00000536871 PHYHD1Q5SRE7 291 aa11.94□□□□□ -0.5
SMG6-203ENST00000536871 HES3Q5TGS1 186 aa11.94□□□□□ -0.5
SMG6-203ENST00000536871 RTL6Q6ICC9 239 aa11.94□□□□□ -0.5
SMG6-203ENST00000536871 SEZ6L2Q6UXD5 910 aa11.94□□□□□ -0.5
SMG6-203ENST00000536871 ZNF431Q8TF32 576 aaPredicted RBP11.94□□□□□ -0.5
SMG6-203ENST00000536871 FAM71F1Q96KD3 344 aaPredicted RBP11.94□□□□□ -0.5
SMG6-203ENST00000536871 PRRT1Q99946 306 aa11.94□□□□□ -0.5
SMG6-203ENST00000536871 LINC00470Q9BZP3 86 aa11.94□□□□□ -0.5
SMG6-203ENST00000536871 RNF122Q9H9V4 155 aa11.94□□□□□ -0.5
SMG6-203ENST00000536871 DEPPQ9NTK1 212 aa11.94□□□□□ -0.5
SMG6-203ENST00000536871 SLC2A8Q9NY64 477 aa11.94□□□□□ -0.5
SMG6-203ENST00000536871 MRPS28Q9Y2Q9 187 aaKnown RBP11.94□□□□□ -0.5
SMG6-203ENST00000536871 A0A0G2JMM0 328 aa11.93□□□□□ -0.5
SMG6-203ENST00000536871 A0A1W2PPB8 328 aa11.93□□□□□ -0.5
SMG6-203ENST00000536871 A0A1W2PRS3 328 aa11.93□□□□□ -0.5
SMG6-203ENST00000536871 KIR3DP1A8MWS1 328 aa11.93□□□□□ -0.5
SMG6-203ENST00000536871 SGCEO43556 437 aa11.93□□□□□ -0.5
SMG6-203ENST00000536871 NEURL1O76050 574 aa11.93□□□□□ -0.5
SMG6-203ENST00000536871 TNFSF15O95150 251 aa11.93□□□□□ -0.5
SMG6-203ENST00000536871 FARS2O95363 451 aaKnown RBP11.93□□□□□ -0.5
SMG6-203ENST00000536871 PDGFAP04085 211 aa11.93□□□□□ -0.5
SMG6-203ENST00000536871 HCKP08631 526 aa11.93□□□□□ -0.5
SMG6-203ENST00000536871 ITGA3P26006 1051 aa11.93□□□□□ -0.5
SMG6-203ENST00000536871 CBX5P45973 191 aa11.93□□□□□ -0.5
SMG6-203ENST00000536871 SLC6A9P48067 706 aa11.93□□□□□ -0.5
SMG6-203ENST00000536871 RAP2BP61225 183 aa11.93□□□□□ -0.5
SMG6-203ENST00000536871 PNLIPRP3Q17RR3 467 aa11.93□□□□□ -0.5
SMG6-203ENST00000536871 ACTBL2Q562R1 376 aa11.93□□□□□ -0.5
SMG6-203ENST00000536871 Q6ZTK2 550 aa11.93□□□□□ -0.5
SMG6-203ENST00000536871 BIVMQ86UB2 503 aa11.93□□□□□ -0.5
SMG6-203ENST00000536871 ZNF101Q8IZC7 436 aa11.93□□□□□ -0.5
SMG6-203ENST00000536871 OR56B1Q8NGI3 324 aa11.93□□□□□ -0.5
SMG6-203ENST00000536871 OR10R2Q8NGX6 335 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms