RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 SLC16A9Q7RTY1 509 aa11.98□□□□□ -0.49
UBE3B-206ENST00000536398 C19orf18Q8NEA5 215 aa11.98□□□□□ -0.49
UBE3B-206ENST00000536398 OR56B2PQ8NGI1 322 aa11.98□□□□□ -0.49
UBE3B-206ENST00000536398 PYDC1Q8WXC3 89 aa11.98□□□□□ -0.49
UBE3B-206ENST00000536398 DNAJC9Q8WXX5 260 aa11.98□□□□□ -0.49
UBE3B-206ENST00000536398 REEP6Q96HR9 211 aa11.98□□□□□ -0.49
UBE3B-206ENST00000536398 TEAD3Q99594 435 aa11.98□□□□□ -0.49
UBE3B-206ENST00000536398 TMPRSS13Q9BYE2 586 aa11.98□□□□□ -0.49
UBE3B-206ENST00000536398 GABARAPL1Q9H0R8 117 aa11.98□□□□□ -0.49
UBE3B-206ENST00000536398 PATZ1Q9HBE1 687 aaKnown RBP11.98□□□□□ -0.49
UBE3B-206ENST00000536398 TMEM165Q9HC07 324 aa11.98□□□□□ -0.49
UBE3B-206ENST00000536398 UFSP2Q9NUQ7 469 aa11.98□□□□□ -0.49
UBE3B-206ENST00000536398 PCDHB10Q9UN67 800 aa11.98□□□□□ -0.49
UBE3B-206ENST00000536398 MXRA5Q9NR99 2828 aa11.98□□□□□ -0.49
UBE3B-206ENST00000536398 LOC105371242A0A075B767 164 aa11.97□□□□□ -0.49
UBE3B-206ENST00000536398 ZAR1LA6NP61 321 aa11.97□□□□□ -0.49
UBE3B-206ENST00000536398 PRR32B1ATL7 298 aa11.97□□□□□ -0.49
UBE3B-206ENST00000536398 PSMD9O00233 223 aa11.97□□□□□ -0.49
UBE3B-206ENST00000536398 FAM20BO75063 409 aa11.97□□□□□ -0.49
UBE3B-206ENST00000536398 LYNP07948 512 aa11.97□□□□□ -0.49
UBE3B-206ENST00000536398 ALOX5APP20292 161 aa11.97□□□□□ -0.49
UBE3B-206ENST00000536398 EFNB1P98172 346 aa11.97□□□□□ -0.49
UBE3B-206ENST00000536398 TIGD6Q17RP2 521 aa11.97□□□□□ -0.49
UBE3B-206ENST00000536398 GFOD2Q3B7J2 385 aa11.97□□□□□ -0.49
UBE3B-206ENST00000536398 TMEM155Q4W5P6 130 aa11.97□□□□□ -0.49
UBE3B-206ENST00000536398 SLC35D3Q5M8T2 416 aa11.97□□□□□ -0.49
UBE3B-206ENST00000536398 SLX4IPQ5VYV7 408 aa11.97□□□□□ -0.49
UBE3B-206ENST00000536398 LRRN1Q6UXK5 716 aa11.97□□□□□ -0.49
UBE3B-206ENST00000536398 ZDHHC13Q8IUH4 622 aa11.97□□□□□ -0.49
UBE3B-206ENST00000536398 KLHL36Q8N4N3 616 aa11.97□□□□□ -0.49
UBE3B-206ENST00000536398 TCEANCQ8N8B7 351 aa11.97□□□□□ -0.49
UBE3B-206ENST00000536398 ZNF454Q8N9F8 522 aa11.97□□□□□ -0.49
UBE3B-206ENST00000536398 CIB1Q99828 191 aa11.97□□□□□ -0.49
UBE3B-206ENST00000536398 ADAT1Q9BUB4 502 aaKnown RBP11.97□□□□□ -0.49
UBE3B-206ENST00000536398 TEX12Q9BXU0 123 aa11.97□□□□□ -0.49
UBE3B-206ENST00000536398 TOR3AQ9H497 397 aa11.97□□□□□ -0.49
UBE3B-206ENST00000536398 METTL17Q9H7H0 456 aaPredicted RBP11.97□□□□□ -0.49
UBE3B-206ENST00000536398 MMP26Q9NRE1 261 aa11.97□□□□□ -0.49
UBE3B-206ENST00000536398 MRPL15Q9P015 296 aaKnown RBP11.97□□□□□ -0.49
UBE3B-206ENST00000536398 OAZ3Q9UMX2 235 aa11.97□□□□□ -0.49
UBE3B-206ENST00000536398 COPS3Q9UNS2 423 aa11.97□□□□□ -0.49
UBE3B-206ENST00000536398 SAC3D1A6NKF1 404 aa11.96□□□□□ -0.49
UBE3B-206ENST00000536398 CEACAM18A8MTB9 384 aa11.96□□□□□ -0.49
UBE3B-206ENST00000536398 RNF212BA8MTL3 300 aa11.96□□□□□ -0.49
UBE3B-206ENST00000536398 F5H0A9 414 aaPredicted RBP11.96□□□□□ -0.49
UBE3B-206ENST00000536398 TRAPPC2LH3BP13 241 aa11.96□□□□□ -0.49
UBE3B-206ENST00000536398 XRCC2O43543 280 aa11.96□□□□□ -0.49
UBE3B-206ENST00000536398 PNPP00491 289 aa11.96□□□□□ -0.49
UBE3B-206ENST00000536398 ADRA2CP18825 462 aa11.96□□□□□ -0.49
UBE3B-206ENST00000536398 PCMT1P22061 227 aa11.96□□□□□ -0.49
UBE3B-206ENST00000536398 MDH2P40926 338 aaKnown RBP11.96□□□□□ -0.49
UBE3B-206ENST00000536398 GATA4P43694 442 aa11.96□□□□□ -0.49
UBE3B-206ENST00000536398 KPNB1Q14974 876 aaKnown RBP11.96□□□□□ -0.49
UBE3B-206ENST00000536398 DCAF12L2Q5VW00 463 aa11.96□□□□□ -0.49
UBE3B-206ENST00000536398 C12orf73Q69YU5 71 aa11.96□□□□□ -0.49
UBE3B-206ENST00000536398 CCDC121Q6ZUS5 278 aa11.96□□□□□ -0.49
UBE3B-206ENST00000536398 RHOUQ7L0Q8 258 aa11.96□□□□□ -0.49
UBE3B-206ENST00000536398 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.96□□□□□ -0.49
UBE3B-206ENST00000536398 SPICQ8N5J4 248 aa11.96□□□□□ -0.49
UBE3B-206ENST00000536398 RFLNBQ8N5W9 214 aa11.96□□□□□ -0.49
UBE3B-206ENST00000536398 CELF2-AS1Q8N7Q2 184 aa11.96□□□□□ -0.49
UBE3B-206ENST00000536398 DEFB108BQ8NET1 73 aa11.96□□□□□ -0.49
UBE3B-206ENST00000536398 CENPNQ96H22 339 aaPredicted RBP11.96□□□□□ -0.49
UBE3B-206ENST00000536398 PGAM5Q96HS1 289 aa11.96□□□□□ -0.49
UBE3B-206ENST00000536398 PKP2Q99959 881 aa11.96□□□□□ -0.49
UBE3B-206ENST00000536398 TMEM246Q9BRR3 403 aa11.96□□□□□ -0.49
UBE3B-206ENST00000536398 TTTY10Q9BZA0 68 aa11.96□□□□□ -0.49
UBE3B-206ENST00000536398 OPN4Q9UHM6 478 aa11.96□□□□□ -0.49
UBE3B-206ENST00000536398 hCG_38984A0A1B0GV85 526 aa11.95□□□□□ -0.5
UBE3B-206ENST00000536398 H3BNX3 289 aa11.95□□□□□ -0.5
UBE3B-206ENST00000536398 IFNL4K9M1U5 179 aa11.95□□□□□ -0.5
UBE3B-206ENST00000536398 GMDSO60547 372 aa11.95□□□□□ -0.5
UBE3B-206ENST00000536398 GRPP07492 148 aa11.95□□□□□ -0.5
UBE3B-206ENST00000536398 WNT2P09544 360 aa11.95□□□□□ -0.5
UBE3B-206ENST00000536398 FCGR1AP12314 374 aa11.95□□□□□ -0.5
UBE3B-206ENST00000536398 THBS2P35442 1172 aa11.95□□□□□ -0.5
UBE3B-206ENST00000536398 GSK3AP49840 483 aa11.95□□□□□ -0.5
UBE3B-206ENST00000536398 ACTR3P61158 418 aa11.95□□□□□ -0.5
UBE3B-206ENST00000536398 ZNF181Q2M3W8 571 aa11.95□□□□□ -0.5
UBE3B-206ENST00000536398 KRTAP24-1Q3LI83 254 aa11.95□□□□□ -0.5
UBE3B-206ENST00000536398 AADACL4Q5VUY2 407 aa11.95□□□□□ -0.5
UBE3B-206ENST00000536398 LYPD2Q6UXB3 125 aa11.95□□□□□ -0.5
UBE3B-206ENST00000536398 ZNF826PQ6ZT77 177 aa11.95□□□□□ -0.5
UBE3B-206ENST00000536398 MEPCEQ7L2J0 689 aaKnown RBP11.95□□□□□ -0.5
UBE3B-206ENST00000536398 PHC2Q8IXK0 858 aa11.95□□□□□ -0.5
UBE3B-206ENST00000536398 BOLLQ8N9W6 283 aaKnown RBP11.95□□□□□ -0.5
UBE3B-206ENST00000536398 Q8TCH9 128 aa11.95□□□□□ -0.5
UBE3B-206ENST00000536398 PPP1R14AQ96A00 147 aa11.95□□□□□ -0.5
UBE3B-206ENST00000536398 LYZL4Q96KX0 146 aa11.95□□□□□ -0.5
UBE3B-206ENST00000536398 IL4I1Q96RQ9 567 aa11.95□□□□□ -0.5
UBE3B-206ENST00000536398 OR10A2Q9H208 303 aa11.95□□□□□ -0.5
UBE3B-206ENST00000536398 C7orf69Q9H7B7 122 aa11.95□□□□□ -0.5
UBE3B-206ENST00000536398 LAMP5Q9UJQ1 280 aa11.95□□□□□ -0.5
UBE3B-206ENST00000536398 RHBDD3Q9Y3P4 386 aa11.95□□□□□ -0.5
UBE3B-206ENST00000536398 LRP12Q9Y561 859 aa11.95□□□□□ -0.5
UBE3B-206ENST00000536398 COL6A5A8TX70 2615 aa11.95□□□□□ -0.5
UBE3B-206ENST00000536398 PPIAL4EA0A075B759 164 aa11.94□□□□□ -0.5
UBE3B-206ENST00000536398 A0A0G2JMP0 313 aa11.94□□□□□ -0.5
UBE3B-206ENST00000536398 A0A0X1KG70 313 aa11.94□□□□□ -0.5
UBE3B-206ENST00000536398 LRRC30A6NM36 301 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms