RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 NFYBP25208 207 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 FGF9P31371 208 aaPredicted RBP2.17□□□□□ -2.06
SKA3-207ENST00000536239 AKT2P31751 481 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 CDKN2BP42772 138 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 CRYBB2P43320 205 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 BDKRB1P46663 353 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 TTPAP49638 278 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 RAB7AP51149 207 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 ZNF140P52738 457 aaPredicted RBP2.17□□□□□ -2.06
SKA3-207ENST00000536239 CRISP1P54107 249 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 CDKN2DP55273 166 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 ATP5IP56385 69 aaPredicted RBP2.17□□□□□ -2.06
SKA3-207ENST00000536239 CLDN12P56749 244 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 DAOAP59103 153 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 SEC61BP60468 96 aaKnown RBP2.17□□□□□ -2.06
SKA3-207ENST00000536239 PPIAP62937 165 aaKnown RBP2.17□□□□□ -2.06
SKA3-207ENST00000536239 PITPNAQ00169 270 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 RBPJQ06330 500 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 ST3GAL4Q11206 333 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 MLLT11Q13015 90 aaPredicted RBP2.17□□□□□ -2.06
SKA3-207ENST00000536239 GAGE5Q13069 117 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 GAGE6Q13070 117 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 OR5I1Q13606 314 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 OR2F1Q13607 317 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 TSTA3Q13630 321 aaPredicted RBP2.17□□□□□ -2.06
SKA3-207ENST00000536239 PTPRCAPQ14761 206 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 RHEBQ15382 184 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 TSNQ15631 228 aaKnown RBP2.17□□□□□ -2.06
SKA3-207ENST00000536239 TPSAB1Q15661 275 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 SSX1Q16384 188 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 IQCJQ1A5X6 159 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 CRY2Q49AN0 593 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 MORN2Q502X0 79 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 UNC50Q53HI1 259 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 RAB6CQ53S08 254 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 OCIAD2Q56VL3 154 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 KHDC3LQ587J8 217 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 CARD16Q5EG05 197 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 WDR38Q5JTN6 314 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 ELFN2Q5R3F8 820 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 PRAMEF5Q5TYX0 476 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 MARC1Q5VT66 337 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 PRAMEF6Q5VXH4 476 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 GGNBP1Q5YKI7 109 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 TMEM198Q66K66 360 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 KIAA0930Q6ICG6 404 aaPredicted RBP2.17□□□□□ -2.06
SKA3-207ENST00000536239 OR2A2Q6IF42 318 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 GJB7Q6PEY0 223 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 ZNF613Q6PF04 617 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 DNM1P34Q6PK57 102 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 DRAM2Q6UX65 266 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 CLEC18BQ6UXF7 455 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 HEPN1Q6WQI6 88 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 B3GLCTQ6Y288 498 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 LYG2Q86SG7 212 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 KCNMB4Q86W47 210 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 TRAPPC5Q8IUR0 188 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 SLC30A8Q8IWU4 369 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 NRMQ8IXM6 262 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 CPXM2Q8N436 756 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 C11orf42Q8N5U0 333 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 KCTD6Q8NC69 237 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 FBXL13Q8NEE6 735 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 STXBP6Q8NFX7 210 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 OR4S1Q8NGB4 309 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 OR4F15Q8NGB8 312 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 OR4E2Q8NGC2 313 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 OR51G2Q8NGK0 314 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 OR5L1Q8NGL2 311 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 OR1S2Q8NGQ3 325 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 OR1J1Q8NGS3 322 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 OR11L1Q8NGX0 322 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 OR52J3Q8NH60 311 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 OR5W2Q8NH69 310 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 HMGCLL1Q8TB92 370 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 ZCCHC10Q8TBK6 192 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 APH1BQ8WW43 257 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 RAB1CQ92928 201 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 TOMM40LQ969M1 308 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 TMEM159Q96B96 161 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 SPSB1Q96BD6 273 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 NSUN4Q96CB9 384 aaKnown RBP2.17□□□□□ -2.06
SKA3-207ENST00000536239 RPUSD4Q96CM3 377 aaKnown RBP2.17□□□□□ -2.06
SKA3-207ENST00000536239 RASD2Q96D21 266 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 KTI12Q96EK9 354 aaPredicted RBP2.17□□□□□ -2.06
SKA3-207ENST00000536239 DTD2Q96FN9 168 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 PGAM5Q96HS1 289 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 C4orf36Q96KX1 117 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 TEX37Q96LM6 180 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 KCTD7Q96MP8 289 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 OR2V2Q96R30 315 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 TP53RKQ96S44 253 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 CLCC1Q96S66 551 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 FAM110AQ9BQ89 295 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 MRPL57Q9BQC6 102 aaKnown RBP2.17□□□□□ -2.06
SKA3-207ENST00000536239 NRIP2Q9BQI9 281 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 SULT4A1Q9BR01 284 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 C11orf70Q9BRQ4 267 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 ADAT1Q9BUB4 502 aaKnown RBP2.17□□□□□ -2.06
SKA3-207ENST00000536239 PBDC1Q9BVG4 233 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms