RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 PHB2Q99623 299 aa12.49□□□□□ -0.41
LIG1-203ENST00000536218 SLC25A21Q9BQT8 299 aaPredicted RBP12.49□□□□□ -0.41
LIG1-203ENST00000536218 LMF2Q9BU23 707 aaKnown RBP12.49□□□□□ -0.41
LIG1-203ENST00000536218 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.49□□□□□ -0.41
LIG1-203ENST00000536218 PUS1Q9Y606 427 aaKnown RBP eCLIP12.49□□□□□ -0.41
LIG1-203ENST00000536218 FRYLO94915 3013 aa12.49□□□□□ -0.41
LIG1-203ENST00000536218 A0A0B4J2E0 115 aa12.49□□□□□ -0.41
LIG1-203ENST00000536218 A0A1B0GX12 115 aa12.49□□□□□ -0.41
LIG1-203ENST00000536218 MARCH11A6NNE9 402 aa12.49□□□□□ -0.41
LIG1-203ENST00000536218 SEC14L6B5MCN3 397 aa12.49□□□□□ -0.41
LIG1-203ENST00000536218 UMAD1C9J7I0 102 aa12.49□□□□□ -0.41
LIG1-203ENST00000536218 CTAG2O75638 210 aa12.49□□□□□ -0.41
LIG1-203ENST00000536218 ZNF432O94892 652 aa12.49□□□□□ -0.41
LIG1-203ENST00000536218 SOD3P08294 240 aa12.49□□□□□ -0.41
LIG1-203ENST00000536218 SERPINF1P36955 418 aa12.49□□□□□ -0.41
LIG1-203ENST00000536218 NANOS3P60323 173 aaKnown RBP12.49□□□□□ -0.41
LIG1-203ENST00000536218 CFHR1Q03591 330 aa12.49□□□□□ -0.41
LIG1-203ENST00000536218 ZNF574Q6ZN55 896 aaPredicted RBP12.49□□□□□ -0.41
LIG1-203ENST00000536218 SLC25A45Q8N413 288 aa12.49□□□□□ -0.41
LIG1-203ENST00000536218 ASB17Q8WXJ9 295 aa12.49□□□□□ -0.41
LIG1-203ENST00000536218 CST11Q9H112 138 aa12.49□□□□□ -0.41
LIG1-203ENST00000536218 OPN3Q9H1Y3 402 aaPredicted RBP12.49□□□□□ -0.41
LIG1-203ENST00000536218 SIGLEC7Q9Y286 467 aa12.49□□□□□ -0.41
LIG1-203ENST00000536218 ASCC3Q8N3C0 2202 aaKnown RBP12.49□□□□□ -0.41
LIG1-203ENST00000536218 MUC3AQ02505 3323 aa12.49□□□□□ -0.41
LIG1-203ENST00000536218 FAM171A2A8MVW0 826 aa12.49□□□□□ -0.41
LIG1-203ENST00000536218 RCBTB2O95199 551 aa12.49□□□□□ -0.41
LIG1-203ENST00000536218 FOLR1P15328 257 aa12.49□□□□□ -0.41
LIG1-203ENST00000536218 GNG10P50151 68 aa12.49□□□□□ -0.41
LIG1-203ENST00000536218 TAS2R19P59542 299 aa12.49□□□□□ -0.41
LIG1-203ENST00000536218 ADAM8P78325 824 aa12.49□□□□□ -0.41
LIG1-203ENST00000536218 NKX6-1P78426 367 aaPredicted RBP12.49□□□□□ -0.41
LIG1-203ENST00000536218 AKR1C8PQ5T2L2 129 aa12.49□□□□□ -0.41
LIG1-203ENST00000536218 MED25Q71SY5 747 aa12.49□□□□□ -0.41
LIG1-203ENST00000536218 MR1Q95460 341 aa12.49□□□□□ -0.41
LIG1-203ENST00000536218 SHDQ96IW2 340 aa12.49□□□□□ -0.41
LIG1-203ENST00000536218 THOC3Q96J01 351 aaKnown RBP12.49□□□□□ -0.41
LIG1-203ENST00000536218 CNN2Q99439 309 aaKnown RBP12.49□□□□□ -0.41
LIG1-203ENST00000536218 MFRPQ9BY79 579 aa12.49□□□□□ -0.41
LIG1-203ENST00000536218 TUBA4BQ9H853 241 aa12.49□□□□□ -0.41
LIG1-203ENST00000536218 PRDM6Q9NQX0 595 aa12.49□□□□□ -0.41
LIG1-203ENST00000536218 ETV7Q9Y603 341 aa12.49□□□□□ -0.41
LIG1-203ENST00000536218 ZNF587BE7ETH6 402 aa12.48□□□□□ -0.41
LIG1-203ENST00000536218 TSPAN15O95858 294 aa12.48□□□□□ -0.41
LIG1-203ENST00000536218 SPARCP09486 303 aa12.48□□□□□ -0.41
LIG1-203ENST00000536218 OR13C7P0DN81 318 aa12.48□□□□□ -0.41
LIG1-203ENST00000536218 CXCL12P48061 93 aa12.48□□□□□ -0.41
LIG1-203ENST00000536218 UNQ9370/PRO34162Q6UXP9 181 aa12.48□□□□□ -0.41
LIG1-203ENST00000536218 CARFQ8N187 725 aa12.48□□□□□ -0.41
LIG1-203ENST00000536218 SPEM1Q8N4L4 309 aa12.48□□□□□ -0.41
LIG1-203ENST00000536218 BHLHE23Q8NDY6 225 aa12.48□□□□□ -0.41
LIG1-203ENST00000536218 SLC25A43Q8WUT9 341 aaPredicted RBP12.48□□□□□ -0.41
LIG1-203ENST00000536218 SAT2Q96F10 170 aaPredicted RBP12.48□□□□□ -0.41
LIG1-203ENST00000536218 S100A13Q99584 98 aa12.48□□□□□ -0.41
LIG1-203ENST00000536218 FSCN3Q9NQT6 498 aa12.48□□□□□ -0.41
LIG1-203ENST00000536218 IGHV1OR21-1A0A087WYE8 117 aa12.48□□□□□ -0.41
LIG1-203ENST00000536218 WNT11O96014 354 aa12.48□□□□□ -0.41
LIG1-203ENST00000536218 CYB5AP00167 134 aa12.48□□□□□ -0.41
LIG1-203ENST00000536218 CRHP06850 196 aa12.48□□□□□ -0.41
LIG1-203ENST00000536218 NAAAQ02083 359 aa12.48□□□□□ -0.41
LIG1-203ENST00000536218 RPL7L1Q6DKI1 246 aaKnown RBP12.48□□□□□ -0.41
LIG1-203ENST00000536218 ZNF610Q8N9Z0 462 aa12.48□□□□□ -0.41
LIG1-203ENST00000536218 OR4S1Q8NGB4 309 aa12.48□□□□□ -0.41
LIG1-203ENST00000536218 OR14K1Q8NGZ2 314 aa12.48□□□□□ -0.41
LIG1-203ENST00000536218 SMIM8Q96KF7 97 aa12.48□□□□□ -0.41
LIG1-203ENST00000536218 BLOC1S5-TXNDC5H3BN57 136 aa12.47□□□□□ -0.41
LIG1-203ENST00000536218 PLGP00747 810 aaPredicted RBP12.47□□□□□ -0.41
LIG1-203ENST00000536218 CEBPGP53567 150 aa12.47□□□□□ -0.41
LIG1-203ENST00000536218 ACTBP60709 375 aa12.47□□□□□ -0.41
LIG1-203ENST00000536218 ACTG1P63261 375 aa12.47□□□□□ -0.41
LIG1-203ENST00000536218 ZNF616Q08AN1 781 aa12.47□□□□□ -0.41
LIG1-203ENST00000536218 HMGN3Q15651 99 aa12.47□□□□□ -0.41
LIG1-203ENST00000536218 POMZP3Q6PJE2 187 aa12.47□□□□□ -0.41
LIG1-203ENST00000536218 LYG2Q86SG7 212 aa12.47□□□□□ -0.41
LIG1-203ENST00000536218 C10orf53Q8N6V4 93 aa12.47□□□□□ -0.41
LIG1-203ENST00000536218 OR1J1Q8NGS3 322 aa12.47□□□□□ -0.41
LIG1-203ENST00000536218 OR1L3Q8NH93 324 aa12.47□□□□□ -0.41
LIG1-203ENST00000536218 ADAMTS17Q8TE56 1095 aa12.47□□□□□ -0.41
LIG1-203ENST00000536218 G6PC3Q9BUM1 346 aa12.47□□□□□ -0.41
LIG1-203ENST00000536218 TRIM2Q9C040 744 aa12.47□□□□□ -0.41
LIG1-203ENST00000536218 NXF5Q9H1B4 397 aaKnown RBP12.47□□□□□ -0.41
LIG1-203ENST00000536218 RIMS4Q9H426 269 aaPredicted RBP12.47□□□□□ -0.41
LIG1-203ENST00000536218 TAF9BQ9HBM6 251 aa12.47□□□□□ -0.41
LIG1-203ENST00000536218 VSIG4Q9Y279 399 aa12.47□□□□□ -0.41
LIG1-203ENST00000536218 TRAV8-7A0A075B6U6 113 aa12.47□□□□□ -0.41
LIG1-203ENST00000536218 OR5H15A6NDH6 313 aa12.47□□□□□ -0.41
LIG1-203ENST00000536218 TVP23AA6NH52 213 aa12.47□□□□□ -0.41
LIG1-203ENST00000536218 OR5H1A6NKK0 313 aa12.47□□□□□ -0.41
LIG1-203ENST00000536218 C17orf51A8MQB3 221 aa12.47□□□□□ -0.41
LIG1-203ENST00000536218 ZNF736B4DX44 427 aaPredicted RBP12.47□□□□□ -0.41
LIG1-203ENST00000536218 AFF3P51826 1226 aaKnown RBP12.47□□□□□ -0.41
LIG1-203ENST00000536218 SLC26A5P58743 744 aa12.47□□□□□ -0.41
LIG1-203ENST00000536218 OGFOD3Q6PK18 319 aa12.47□□□□□ -0.41
LIG1-203ENST00000536218 PTPMT1Q8WUK0 201 aaPredicted RBP12.47□□□□□ -0.41
LIG1-203ENST00000536218 MALSU1Q96EH3 234 aa12.47□□□□□ -0.41
LIG1-203ENST00000536218 MOGAT1Q96PD6 335 aa12.47□□□□□ -0.41
LIG1-203ENST00000536218 ADOQ96SZ5 270 aa12.47□□□□□ -0.41
LIG1-203ENST00000536218 NUDT22Q9BRQ3 303 aa12.47□□□□□ -0.41
LIG1-203ENST00000536218 ZNF426Q9BUY5 554 aa12.47□□□□□ -0.41
LIG1-203ENST00000536218 WNT16Q9UBV4 365 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms