RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 TP53I11O14683 189 aa11.64□□□□□ -0.55
LDLR-203ENST00000535915 EIF1P41567 113 aaKnown RBP11.64□□□□□ -0.55
LDLR-203ENST00000535915 CX3CR1P49238 355 aa11.64□□□□□ -0.55
LDLR-203ENST00000535915 ZNF273Q14593 569 aa11.64□□□□□ -0.55
LDLR-203ENST00000535915 RGS7BPQ6MZT1 257 aaPredicted RBP11.64□□□□□ -0.55
LDLR-203ENST00000535915 MRPL14Q6P1L8 145 aaKnown RBP11.64□□□□□ -0.55
LDLR-203ENST00000535915 GLIPR1L1Q6UWM5 242 aa11.64□□□□□ -0.55
LDLR-203ENST00000535915 RTN4RL2Q86UN3 420 aa11.64□□□□□ -0.55
LDLR-203ENST00000535915 OR52H1Q8NGJ2 320 aa11.64□□□□□ -0.55
LDLR-203ENST00000535915 IFT22Q9H7X7 185 aa11.64□□□□□ -0.55
LDLR-203ENST00000535915 ZNF319Q9P2F9 582 aa11.64□□□□□ -0.55
LDLR-203ENST00000535915 MRPS28Q9Y2Q9 187 aaKnown RBP11.64□□□□□ -0.55
LDLR-203ENST00000535915 HDGFL3Q9Y3E1 203 aa11.64□□□□□ -0.55
LDLR-203ENST00000535915 CHCHD2Q9Y6H1 151 aaPredicted RBP11.64□□□□□ -0.55
LDLR-203ENST00000535915 SESN1Q9Y6P5 492 aa11.64□□□□□ -0.55
LDLR-203ENST00000535915 AQP7P3A6NL99 342 aa11.63□□□□□ -0.55
LDLR-203ENST00000535915 TMEM14DPA8MWL7 114 aa11.63□□□□□ -0.55
LDLR-203ENST00000535915 STK17BO94768 372 aa11.63□□□□□ -0.55
LDLR-203ENST00000535915 CELA2AP08217 269 aa11.63□□□□□ -0.55
LDLR-203ENST00000535915 ZP3P21754 424 aa11.63□□□□□ -0.55
LDLR-203ENST00000535915 CD96P40200 585 aa11.63□□□□□ -0.55
LDLR-203ENST00000535915 FGL1Q08830 312 aa11.63□□□□□ -0.55
LDLR-203ENST00000535915 TUSC1Q2TAM9 212 aa11.63□□□□□ -0.55
LDLR-203ENST00000535915 HLA-BQ31612 363 aa11.63□□□□□ -0.55
LDLR-203ENST00000535915 LRRC37A5PQ49AS3 106 aa11.63□□□□□ -0.55
LDLR-203ENST00000535915 RHOUQ7L0Q8 258 aa11.63□□□□□ -0.55
LDLR-203ENST00000535915 SLC25A42Q86VD7 318 aa11.63□□□□□ -0.55
LDLR-203ENST00000535915 ZNF283Q8N7M2 679 aa11.63□□□□□ -0.55
LDLR-203ENST00000535915 LINC00469Q8N7U9 141 aa11.63□□□□□ -0.55
LDLR-203ENST00000535915 FADS6Q8N9I5 356 aa11.63□□□□□ -0.55
LDLR-203ENST00000535915 ELP5Q8TE02 316 aa11.63□□□□□ -0.55
LDLR-203ENST00000535915 MRGPRFQ96AM1 343 aa11.63□□□□□ -0.55
LDLR-203ENST00000535915 WBP1Q96G27 269 aa11.63□□□□□ -0.55
LDLR-203ENST00000535915 REG4Q9BYZ8 158 aa11.63□□□□□ -0.55
LDLR-203ENST00000535915 CST11Q9H112 138 aa11.63□□□□□ -0.55
LDLR-203ENST00000535915 COMMD9Q9P000 198 aa11.63□□□□□ -0.55
LDLR-203ENST00000535915 PFDN2Q9UHV9 154 aa11.63□□□□□ -0.55
LDLR-203ENST00000535915 KCNK7Q9Y2U2 307 aa11.63□□□□□ -0.55
LDLR-203ENST00000535915 TNRC6BQ9UPQ9 1833 aaKnown RBP11.63□□□□□ -0.55
LDLR-203ENST00000535915 CCDC85CA6NKD9 419 aa11.63□□□□□ -0.55
LDLR-203ENST00000535915 DKK1O94907 266 aa11.63□□□□□ -0.55
LDLR-203ENST00000535915 MPIG6BO95866 241 aa11.63□□□□□ -0.55
LDLR-203ENST00000535915 CD8AP01732 235 aa11.63□□□□□ -0.55
LDLR-203ENST00000535915 IFNA6P05013 189 aa11.63□□□□□ -0.55
LDLR-203ENST00000535915 HCKP08631 526 aa11.63□□□□□ -0.55
LDLR-203ENST00000535915 ANOS1P23352 680 aa11.63□□□□□ -0.55
LDLR-203ENST00000535915 ADH6P28332 368 aa11.63□□□□□ -0.55
LDLR-203ENST00000535915 MPGP29372 298 aa11.63□□□□□ -0.55
LDLR-203ENST00000535915 AGTR1P30556 359 aa11.63□□□□□ -0.55
LDLR-203ENST00000535915 CALCRP30988 508 aa11.63□□□□□ -0.55
LDLR-203ENST00000535915 CLDN17P56750 224 aa11.63□□□□□ -0.55
LDLR-203ENST00000535915 PPP1R1AQ13522 171 aa11.63□□□□□ -0.55
LDLR-203ENST00000535915 ZNF660Q6AZW8 331 aaPredicted RBP11.63□□□□□ -0.55
LDLR-203ENST00000535915 LPCAT3Q6P1A2 487 aa11.63□□□□□ -0.55
LDLR-203ENST00000535915 FAM57BQ71RH2 274 aa11.63□□□□□ -0.55
LDLR-203ENST00000535915 PGAP1Q75T13 922 aa11.63□□□□□ -0.55
LDLR-203ENST00000535915 LYG2Q86SG7 212 aa11.63□□□□□ -0.55
LDLR-203ENST00000535915 OR6K3Q8NGY3 331 aa11.63□□□□□ -0.55
LDLR-203ENST00000535915 SEC22AQ96IW7 307 aa11.63□□□□□ -0.55
LDLR-203ENST00000535915 GPN3Q9UHW5 284 aaPredicted RBP11.63□□□□□ -0.55
LDLR-203ENST00000535915 MFSD2BA6NFX1 497 aa11.62□□□□□ -0.55
LDLR-203ENST00000535915 TLX3O43711 291 aaPredicted RBP11.62□□□□□ -0.55
LDLR-203ENST00000535915 PMP2P02689 132 aa11.62□□□□□ -0.55
LDLR-203ENST00000535915 ZBTB25P24278 435 aa11.62□□□□□ -0.55
LDLR-203ENST00000535915 OR3A4PP47883 348 aa11.62□□□□□ -0.55
LDLR-203ENST00000535915 GSK3AP49840 483 aa11.62□□□□□ -0.55
LDLR-203ENST00000535915 SLC35A1P78382 337 aa11.62□□□□□ -0.55
LDLR-203ENST00000535915 IL13RA1P78552 427 aa11.62□□□□□ -0.55
LDLR-203ENST00000535915 SGCAQ16586 387 aa11.62□□□□□ -0.55
LDLR-203ENST00000535915 HIST3H3Q16695 136 aa11.62□□□□□ -0.55
LDLR-203ENST00000535915 OR5AS1Q8N127 324 aa11.62□□□□□ -0.55
LDLR-203ENST00000535915 ZDHHC22Q8N966 263 aa11.62□□□□□ -0.55
LDLR-203ENST00000535915 DTWD2Q8NBA8 298 aa11.62□□□□□ -0.55
LDLR-203ENST00000535915 TMEM104Q8NE00 496 aa11.62□□□□□ -0.55
LDLR-203ENST00000535915 TMEM41AQ96HV5 264 aa11.62□□□□□ -0.55
LDLR-203ENST00000535915 GPER1Q99527 375 aa11.62□□□□□ -0.55
LDLR-203ENST00000535915 ZNF416Q9BWM5 594 aa11.62□□□□□ -0.55
LDLR-203ENST00000535915 SAV1Q9H4B6 383 aaPredicted RBP11.62□□□□□ -0.55
LDLR-203ENST00000535915 PNRC2Q9NPJ4 139 aaKnown RBP11.62□□□□□ -0.55
LDLR-203ENST00000535915 KIAA1549Q9HCM3 1950 aa11.62□□□□□ -0.55
LDLR-203ENST00000535915 SSX5O60225 188 aa11.62□□□□□ -0.55
LDLR-203ENST00000535915 CASRP41180 1078 aa11.62□□□□□ -0.55
LDLR-203ENST00000535915 PCOLCEQ15113 449 aa11.62□□□□□ -0.55
LDLR-203ENST00000535915 USB1Q9BQ65 265 aaKnown RBP11.62□□□□□ -0.55
LDLR-203ENST00000535915 MS4A7Q9GZW8 240 aaPredicted RBP11.62□□□□□ -0.55
LDLR-203ENST00000535915 LPAR5Q9H1C0 372 aa11.62□□□□□ -0.55
LDLR-203ENST00000535915 BANF2Q9H503 90 aa11.62□□□□□ -0.55
LDLR-203ENST00000535915 PCDHB16Q9NRJ7 776 aa11.62□□□□□ -0.55
LDLR-203ENST00000535915 FBLN5Q9UBX5 448 aa11.62□□□□□ -0.55
LDLR-203ENST00000535915 SDK2Q58EX2 2172 aa11.62□□□□□ -0.55
LDLR-203ENST00000535915 C9orf170A2RU37 121 aa11.62□□□□□ -0.55
LDLR-203ENST00000535915 OR2AT4A6NND4 320 aa11.62□□□□□ -0.55
LDLR-203ENST00000535915 FAM25EA8MYX2 175 aa11.62□□□□□ -0.55
LDLR-203ENST00000535915 CHRM2P08172 466 aa11.62□□□□□ -0.55
LDLR-203ENST00000535915 AKR1C4P17516 323 aa11.62□□□□□ -0.55
LDLR-203ENST00000535915 VAMP1P23763 118 aa11.62□□□□□ -0.55
LDLR-203ENST00000535915 MPZP25189 248 aa11.62□□□□□ -0.55
LDLR-203ENST00000535915 FKBP2P26885 142 aaKnown RBP11.62□□□□□ -0.55
LDLR-203ENST00000535915 GUCA1AP43080 201 aaPredicted RBP11.62□□□□□ -0.55
LDLR-203ENST00000535915 TMPPEQ6ZT21 453 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms