RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 SPRY4Q9C004 299 aa11.79□□□□□ -0.52
VPS33B-202ENST00000535906 B3GNT4Q9C0J1 378 aa11.79□□□□□ -0.52
VPS33B-202ENST00000535906 CHST6Q9GZX3 395 aa11.79□□□□□ -0.52
VPS33B-202ENST00000535906 GPR84Q9NQS5 396 aa11.79□□□□□ -0.52
VPS33B-202ENST00000535906 AHCTF1Q8WYP5 2266 aa11.79□□□□□ -0.52
VPS33B-202ENST00000535906 C5orf63A6NC05 138 aa11.79□□□□□ -0.52
VPS33B-202ENST00000535906 WIPF3A6NGB9 483 aa11.79□□□□□ -0.52
VPS33B-202ENST00000535906 C9orf172C9J069 976 aa11.79□□□□□ -0.52
VPS33B-202ENST00000535906 JMJD7P0C870 316 aa11.79□□□□□ -0.52
VPS33B-202ENST00000535906 RAB3AP20336 220 aa11.79□□□□□ -0.52
VPS33B-202ENST00000535906 S100A11P31949 105 aa11.79□□□□□ -0.52
VPS33B-202ENST00000535906 LSM6P62312 80 aaKnown RBP11.79□□□□□ -0.52
VPS33B-202ENST00000535906 OC90Q02509 493 aaPredicted RBP11.79□□□□□ -0.52
VPS33B-202ENST00000535906 AANATQ16613 207 aa11.79□□□□□ -0.52
VPS33B-202ENST00000535906 C4orf46Q504U0 113 aa11.79□□□□□ -0.52
VPS33B-202ENST00000535906 C10orf128Q5T292 105 aa11.79□□□□□ -0.52
VPS33B-202ENST00000535906 IDO2Q6ZQW0 420 aa11.79□□□□□ -0.52
VPS33B-202ENST00000535906 FAM57BQ71RH2 274 aa11.79□□□□□ -0.52
VPS33B-202ENST00000535906 NAA40Q86UY6 237 aa11.79□□□□□ -0.52
VPS33B-202ENST00000535906 SLC22A24Q8N4F4 322 aa11.79□□□□□ -0.52
VPS33B-202ENST00000535906 ESX1Q8N693 406 aa11.79□□□□□ -0.52
VPS33B-202ENST00000535906 SUN5Q8TC36 379 aa11.79□□□□□ -0.52
VPS33B-202ENST00000535906 CCDC107Q8WV48 283 aa11.79□□□□□ -0.52
VPS33B-202ENST00000535906 SPACA5Q96QH8 159 aa11.79□□□□□ -0.52
VPS33B-202ENST00000535906 STRADBQ9C0K7 418 aa11.79□□□□□ -0.52
VPS33B-202ENST00000535906 NELFAQ9H3P2 528 aa11.79□□□□□ -0.52
VPS33B-202ENST00000535906 POFUT1Q9H488 388 aa11.79□□□□□ -0.52
VPS33B-202ENST00000535906 P4HTMQ9NXG6 502 aa11.79□□□□□ -0.52
VPS33B-202ENST00000535906 A0A1W2PNU3 283 aaPredicted RBP11.78□□□□□ -0.52
VPS33B-202ENST00000535906 ARPC5O15511 151 aa11.78□□□□□ -0.52
VPS33B-202ENST00000535906 CYB5AP00167 134 aa11.78□□□□□ -0.52
VPS33B-202ENST00000535906 F10P00742 488 aa11.78□□□□□ -0.52
VPS33B-202ENST00000535906 RAB6AP20340 208 aa11.78□□□□□ -0.52
VPS33B-202ENST00000535906 MSR1P21757 451 aa11.78□□□□□ -0.52
VPS33B-202ENST00000535906 SRD5A2P31213 254 aa11.78□□□□□ -0.52
VPS33B-202ENST00000535906 ZNF133P52736 654 aaPredicted RBP11.78□□□□□ -0.52
VPS33B-202ENST00000535906 QRFPP83859 136 aa11.78□□□□□ -0.52
VPS33B-202ENST00000535906 ENDOGQ14249 297 aaKnown RBP11.78□□□□□ -0.52
VPS33B-202ENST00000535906 GFOD2Q3B7J2 385 aa11.78□□□□□ -0.52
VPS33B-202ENST00000535906 DCAF12L2Q5VW00 463 aa11.78□□□□□ -0.52
VPS33B-202ENST00000535906 GALNT16Q8N428 558 aa11.78□□□□□ -0.52
VPS33B-202ENST00000535906 LRRC18Q8N456 261 aa11.78□□□□□ -0.52
VPS33B-202ENST00000535906 ZNF283Q8N7M2 679 aa11.78□□□□□ -0.52
VPS33B-202ENST00000535906 OR14L1PQ8NHC6 308 aa11.78□□□□□ -0.52
VPS33B-202ENST00000535906 FAM46BQ96A09 425 aa11.78□□□□□ -0.52
VPS33B-202ENST00000535906 NABP1Q96AH0 204 aa11.78□□□□□ -0.52
VPS33B-202ENST00000535906 ZNF837Q96EG3 531 aaPredicted RBP11.78□□□□□ -0.52
VPS33B-202ENST00000535906 FAM71F1Q96KD3 344 aaPredicted RBP11.78□□□□□ -0.52
VPS33B-202ENST00000535906 ZPBPQ9BS86 351 aa11.78□□□□□ -0.52
VPS33B-202ENST00000535906 RBM24Q9BX46 236 aaKnown RBP11.78□□□□□ -0.52
VPS33B-202ENST00000535906 DEPPQ9NTK1 212 aa11.78□□□□□ -0.52
VPS33B-202ENST00000535906 FOXD3Q9UJU5 478 aaPredicted RBP11.78□□□□□ -0.52
VPS33B-202ENST00000535906 SLC5A6Q9Y289 635 aa11.78□□□□□ -0.52
VPS33B-202ENST00000535906 TMEM82A0PJX8 343 aa11.78□□□□□ -0.52
VPS33B-202ENST00000535906 TMEM235A6NFC5 223 aa11.78□□□□□ -0.52
VPS33B-202ENST00000535906 H3BUI4 141 aa11.78□□□□□ -0.52
VPS33B-202ENST00000535906 RAB27BO00194 218 aa11.78□□□□□ -0.52
VPS33B-202ENST00000535906 SMAD9O15198 467 aaKnown RBP11.78□□□□□ -0.52
VPS33B-202ENST00000535906 CD74P04233 296 aa11.78□□□□□ -0.52
VPS33B-202ENST00000535906 OR4E1P0C645 316 aa11.78□□□□□ -0.52
VPS33B-202ENST00000535906 VSIG8P0DPA2 414 aa11.78□□□□□ -0.52
VPS33B-202ENST00000535906 NR2C1P13056 603 aa11.78□□□□□ -0.52
VPS33B-202ENST00000535906 ZNF20P17024 532 aa11.78□□□□□ -0.52
VPS33B-202ENST00000535906 GUCA1AP43080 201 aaPredicted RBP11.78□□□□□ -0.52
VPS33B-202ENST00000535906 GRB2P62993 217 aaKnown RBP11.78□□□□□ -0.52
VPS33B-202ENST00000535906 HLXQ14774 488 aaPredicted RBP11.78□□□□□ -0.52
VPS33B-202ENST00000535906 TMUB2Q71RG4 321 aa11.78□□□□□ -0.52
VPS33B-202ENST00000535906 PSMF1Q92530 271 aa11.78□□□□□ -0.52
VPS33B-202ENST00000535906 CMBLQ96DG6 245 aa11.78□□□□□ -0.52
VPS33B-202ENST00000535906 UQCC2Q9BRT2 126 aa11.78□□□□□ -0.52
VPS33B-202ENST00000535906 TINAGL1Q9GZM7 467 aaPredicted RBP11.78□□□□□ -0.52
VPS33B-202ENST00000535906 MYOZ1Q9NP98 299 aaPredicted RBP11.78□□□□□ -0.52
VPS33B-202ENST00000535906 RAB22AQ9UL26 194 aa11.78□□□□□ -0.52
VPS33B-202ENST00000535906 LRRC3CA6NJW4 275 aa11.77□□□□□ -0.52
VPS33B-202ENST00000535906 ZNF736B4DX44 427 aaPredicted RBP11.77□□□□□ -0.52
VPS33B-202ENST00000535906 M0QYG6 137 aa11.77□□□□□ -0.52
VPS33B-202ENST00000535906 DHHO43323 396 aa11.77□□□□□ -0.52
VPS33B-202ENST00000535906 AMY2AP04746 511 aa11.77□□□□□ -0.52
VPS33B-202ENST00000535906 ZNF735P0CB33 412 aa11.77□□□□□ -0.52
VPS33B-202ENST00000535906 CD59P13987 128 aa11.77□□□□□ -0.52
VPS33B-202ENST00000535906 M6PRP20645 277 aa11.77□□□□□ -0.52
VPS33B-202ENST00000535906 NTF4P34130 210 aa11.77□□□□□ -0.52
VPS33B-202ENST00000535906 ZNF93P35789 620 aaPredicted RBP11.77□□□□□ -0.52
VPS33B-202ENST00000535906 GMFBP60983 142 aa11.77□□□□□ -0.52
VPS33B-202ENST00000535906 ZNF528Q3MIS6 628 aa11.77□□□□□ -0.52
VPS33B-202ENST00000535906 RAB12Q6IQ22 244 aa11.77□□□□□ -0.52
VPS33B-202ENST00000535906 C11orf88Q6PI97 169 aa11.77□□□□□ -0.52
VPS33B-202ENST00000535906 CHMP1BQ7LBR1 199 aa11.77□□□□□ -0.52
VPS33B-202ENST00000535906 ANGPTL5Q86XS5 388 aa11.77□□□□□ -0.52
VPS33B-202ENST00000535906 OR5AS1Q8N127 324 aa11.77□□□□□ -0.52
VPS33B-202ENST00000535906 BEST3Q8N1M1 668 aa11.77□□□□□ -0.52
VPS33B-202ENST00000535906 FOXJ2Q9P0K8 574 aa11.77□□□□□ -0.52
VPS33B-202ENST00000535906 OR5H15A6NDH6 313 aa11.77□□□□□ -0.53
VPS33B-202ENST00000535906 METTL21EPA6NDL7 271 aa11.77□□□□□ -0.53
VPS33B-202ENST00000535906 CDX4O14627 284 aaPredicted RBP11.77□□□□□ -0.53
VPS33B-202ENST00000535906 RP2O75695 350 aa11.77□□□□□ -0.53
VPS33B-202ENST00000535906 SERPINA7P05543 415 aa11.77□□□□□ -0.53
VPS33B-202ENST00000535906 ZNF250P15622 560 aa11.77□□□□□ -0.53
VPS33B-202ENST00000535906 CTSSP25774 331 aa11.77□□□□□ -0.53
VPS33B-202ENST00000535906 RAC3P60763 192 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms