RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 PARVBQ9HBI1 364 aa2.49□□□□□ -2.01
SNHG1-202ENST00000535689 ZNHIT6Q9NWK9 470 aaKnown RBP2.49□□□□□ -2.01
SNHG1-202ENST00000535689 MRPL39Q9NYK5 338 aaKnown RBP2.49□□□□□ -2.01
SNHG1-202ENST00000535689 CLCF1Q9UBD9 225 aa2.49□□□□□ -2.01
SNHG1-202ENST00000535689 PRODH2Q9UF12 536 aa2.49□□□□□ -2.01
SNHG1-202ENST00000535689 ZNF107Q9UII5 783 aaPredicted RBP2.49□□□□□ -2.01
SNHG1-202ENST00000535689 SAMD4AQ9UPU9 718 aaKnown RBP2.49□□□□□ -2.01
SNHG1-202ENST00000535689 C15orf41Q9Y2V0 281 aa2.49□□□□□ -2.01
SNHG1-202ENST00000535689 CHCHD2Q9Y6H1 151 aaPredicted RBP2.49□□□□□ -2.01
SNHG1-202ENST00000535689 DOCK11Q5JSL3 2073 aa2.49□□□□□ -2.01
SNHG1-202ENST00000535689 TRRAPQ9Y4A5 3859 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 PPIAL4CA0A0B4J2A2 164 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 FAM220BPB1ANY3 271 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 E9PLD3 99 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 F8WDY8 70 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 FOXE1O00358 373 aaPredicted RBP2.48□□□□□ -2.01
SNHG1-202ENST00000535689 SLC17A2O00624 439 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 PSTPIP1O43586 416 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 SPOPO43791 374 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 OR1I1O60431 355 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 SERF1AO75920 110 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 DUSP14O95147 198 aaKnown RBP2.48□□□□□ -2.01
SNHG1-202ENST00000535689 IGHV3-9P01782 118 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 SOD3P08294 240 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 PPIAL4GP0DN37 164 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 ZNF708P17019 499 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 TPSB2P20231 275 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 IL32P24001 234 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 LOXP28300 417 aaPredicted RBP2.48□□□□□ -2.01
SNHG1-202ENST00000535689 NTSP30990 170 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 RPL22P35268 128 aaKnown RBP2.48□□□□□ -2.01
SNHG1-202ENST00000535689 FDFT1P37268 417 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 BDKRB1P46663 353 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 SLCO1A2P46721 670 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 ALDH3B2P48448 385 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 FABP6P51161 128 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 ARFIP1P53367 373 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 DSCR4P56555 118 aaPredicted RBP2.48□□□□□ -2.01
SNHG1-202ENST00000535689 DSCR10P59022 87 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 EIF3EP60228 445 aaKnown RBP2.48□□□□□ -2.01
SNHG1-202ENST00000535689 UBE2HP62256 183 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 BTN3A2P78410 334 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 ACVR1Q04771 509 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 IL18R1Q13478 541 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 GGTLC2Q14390 218 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 KCNJ11Q14654 390 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 GANABQ14697 944 aaKnown RBP2.48□□□□□ -2.01
SNHG1-202ENST00000535689 KIAA0040Q15053 153 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 TPSAB1Q15661 275 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 EXOC3L2Q2M3D2 409 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 LCE1EQ5T753 118 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 PRAMEF20Q5VT98 475 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 AGTRAPQ6RW13 159 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 ZNF550Q7Z398 422 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 LCA5Q86VQ0 697 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 PLCZ1Q86YW0 608 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 CCDC50Q8IVM0 306 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 ST13P4Q8IZP2 240 aaPredicted RBP2.48□□□□□ -2.01
SNHG1-202ENST00000535689 KRT222Q8N1A0 295 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 CA13Q8N1Q1 262 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 MUC15Q8N387 334 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 OTUD6BQ8N6M0 293 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 ARIH2OSQ8N7S6 290 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 C15orf54Q8N8G6 183 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 ZNF491Q8N8L2 437 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 OR5T3Q8NGG3 340 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 NANPQ8TBE9 248 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 ZNF721Q8TF20 911 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 AENQ8WTP8 325 aaKnown RBP2.48□□□□□ -2.01
SNHG1-202ENST00000535689 NAT14Q8WUY8 206 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 UPRTQ96BW1 309 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 FGGYQ96C11 551 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 QKIQ96PU8 341 aaKnown RBP eCLIP2.48□□□□□ -2.01
SNHG1-202ENST00000535689 KIR2DL4Q99706 377 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 TPPP3Q9BW30 176 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 RSPO3Q9BXY4 272 aaPredicted RBP2.48□□□□□ -2.01
SNHG1-202ENST00000535689 ACTR6Q9GZN1 396 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 RAB1BQ9H0U4 201 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 METTL17Q9H7H0 456 aaPredicted RBP2.48□□□□□ -2.01
SNHG1-202ENST00000535689 RNF122Q9H9V4 155 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 LYRM4Q9HD34 91 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 BFARQ9NZS9 450 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 DHRS4-AS1Q9P1J3 65 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 DCDC2Q9UHG0 476 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 ZNF223Q9UK11 482 aaPredicted RBP2.48□□□□□ -2.01
SNHG1-202ENST00000535689 PSME2Q9UL46 239 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 MCTS1Q9ULC4 181 aaKnown RBP2.48□□□□□ -2.01
SNHG1-202ENST00000535689 FOXJ3Q9UPW0 622 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 VSIG4Q9Y279 399 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 MRPS7Q9Y2R9 242 aaKnown RBP2.48□□□□□ -2.01
SNHG1-202ENST00000535689 KLHDC2Q9Y2U9 406 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 PRR14LQ5THK1 2151 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 PLCE1Q9P212 2302 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 SVEP1Q4LDE5 3571 aa2.48□□□□□ -2.01
SNHG1-202ENST00000535689 ZNF860A6NHJ4 632 aa2.47□□□□□ -2.01
SNHG1-202ENST00000535689 IQCF5A8MTL0 148 aa2.47□□□□□ -2.01
SNHG1-202ENST00000535689 CCL22O00626 93 aa2.47□□□□□ -2.01
SNHG1-202ENST00000535689 ACOX3O15254 700 aa2.47□□□□□ -2.01
SNHG1-202ENST00000535689 ERI3O43414 337 aaKnown RBP2.47□□□□□ -2.01
SNHG1-202ENST00000535689 ICOSLGO75144 302 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms