RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 OR51A7Q8NH64 312 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 TSEN15Q8WW01 171 aaKnown RBP5.86□□□□□ -1.47
USP28-202ENST00000535607 NEU4Q8WWR8 484 aaPredicted RBP5.86□□□□□ -1.47
USP28-202ENST00000535607 MAFIPQ8WZ33 124 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 KLK6Q92876 244 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 HIST1H2BAQ96A08 127 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 FAM3DQ96BQ1 224 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 C3orf49Q96BT1 292 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 LURAP1Q96LR2 239 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 SSX3Q99909 188 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 RPP25Q9BUL9 199 aaKnown RBP5.86□□□□□ -1.47
USP28-202ENST00000535607 HRH4Q9H3N8 390 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 RAB18Q9NP72 206 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 FAM212BQ9NTI7 297 aaPredicted RBP5.86□□□□□ -1.47
USP28-202ENST00000535607 GAR1Q9NY12 217 aaKnown RBP5.86□□□□□ -1.47
USP28-202ENST00000535607 C5AR2Q9P296 337 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 THAP10Q9P2Z0 257 aaPredicted RBP5.86□□□□□ -1.47
USP28-202ENST00000535607 GHRLQ9UBU3 117 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 CHRNA9Q9UGM1 479 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 LAMP5Q9UJQ1 280 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 CSAG2Q9Y5P2 127 aa5.86□□□□□ -1.47
USP28-202ENST00000535607 BORCS7-ASMTA0A0B4J1R7 106 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 C13orf42A0A1B0GVH6 325 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 SEC14L6B5MCN3 397 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 PRRT4C9JH25 899 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 M0R036 132 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 PIN1P1O15428 100 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 MED6O75586 246 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 AIFM1O95831 613 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 ACTL6AO96019 429 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 RENP00797 406 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 CST4P01036 141 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 MAS1P04201 325 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 GAPDHP04406 335 aaKnown RBP5.85□□□□□ -1.47
USP28-202ENST00000535607 CD5P06127 495 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 CRHP06850 196 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 ADRB3P13945 408 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 PGAM2P15259 253 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 ADCYAP1P18509 176 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 ZBTB25P24278 435 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 CMPK1P30085 196 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 PSMB10P40306 273 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 AQP2P41181 271 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 NAA10P41227 235 aaPredicted RBP5.85□□□□□ -1.47
USP28-202ENST00000535607 POU3F4P49335 361 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 RBP2P50120 134 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 SULT1A2P50226 295 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 ATP1B3P54709 279 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 CLDN12P56749 244 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 TAS2R60P59551 318 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 PKIAP61925 76 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 CSNK1G2P78368 415 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 MRPS21P82921 87 aaKnown RBP5.85□□□□□ -1.47
USP28-202ENST00000535607 TFF2Q03403 129 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 MELKQ14680 651 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 ATXN7L3Q14CW9 347 aaPredicted RBP5.85□□□□□ -1.47
USP28-202ENST00000535607 MLF2Q15773 248 aaPredicted RBP5.85□□□□□ -1.47
USP28-202ENST00000535607 C2orf68Q2NKX9 166 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 C2orf76Q3KRA6 126 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 LRRC37A5PQ49AS3 106 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 SCGB2B2Q4G0G5 96 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 KRBOX4Q5JUW0 171 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 DCST2Q5T1A1 773 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 MRPL2Q5T653 305 aaKnown RBP5.85□□□□□ -1.47
USP28-202ENST00000535607 ATPAF1Q5TC12 328 aaPredicted RBP5.85□□□□□ -1.47
USP28-202ENST00000535607 FAM180BQ6P0A1 224 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 PAPD4Q6PIY7 484 aaKnown RBP5.85□□□□□ -1.47
USP28-202ENST00000535607 OPN5Q6U736 354 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 UNQ6126/PRO20091Q6UXV3 157 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 ZNF627Q7L945 461 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 SSX6Q7RTT6 188 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 MDGA2Q7Z553 956 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 LRRTM4Q86VH4 590 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 NKAIN3Q8N8D7 197 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 ACBD4Q8NC06 268 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 OR4E2Q8NGC2 313 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 OR9A2Q8NGT5 310 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 OR2A12Q8NGT7 310 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 OR4K13Q8NH42 304 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 TERB2Q8NHR7 220 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 PFN4Q8NHR9 129 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 MBD3L2Q8NHZ7 208 aaPredicted RBP5.85□□□□□ -1.47
USP28-202ENST00000535607 TMED6Q8WW62 240 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 OIT3Q8WWZ8 545 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 OR8D1Q8WZ84 308 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 MS4A6EQ96DS6 147 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 CNRIP1Q96F85 164 aaPredicted RBP5.85□□□□□ -1.47
USP28-202ENST00000535607 AQP10Q96PS8 301 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 TNFRSF13CQ96RJ3 184 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 SDF2Q99470 211 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 GFI1Q99684 422 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 GABRG3Q99928 467 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 NUDT16L1Q9BRJ7 211 aaKnown RBP5.85□□□□□ -1.47
USP28-202ENST00000535607 GPR174Q9BXC1 333 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 RSPO3Q9BXY4 272 aaPredicted RBP5.85□□□□□ -1.47
USP28-202ENST00000535607 OR52A5Q9H2C5 316 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 LMAN1LQ9HAT1 526 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 OBP2BQ9NPH6 170 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 LHX9Q9NQ69 397 aa5.85□□□□□ -1.47
USP28-202ENST00000535607 WNT16Q9UBV4 365 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms