RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 ARL6IP6Q8N6S5 226 aa11.43□□□□□ -0.58
SPG11-203ENST00000535302 OR2Z1Q8NG97 314 aa11.43□□□□□ -0.58
SPG11-203ENST00000535302 OR6M1Q8NGM8 313 aa11.43□□□□□ -0.58
SPG11-203ENST00000535302 SLC39A7Q92504 469 aa11.43□□□□□ -0.58
SPG11-203ENST00000535302 HRH1P35367 487 aa11.43□□□□□ -0.58
SPG11-203ENST00000535302 ERVFC1-1P60608 527 aa11.43□□□□□ -0.58
SPG11-203ENST00000535302 LAIR1Q6GTX8 287 aa11.43□□□□□ -0.58
SPG11-203ENST00000535302 OR1L4Q8NGR5 311 aa11.43□□□□□ -0.58
SPG11-203ENST00000535302 NUDCD2Q8WVJ2 157 aa11.43□□□□□ -0.58
SPG11-203ENST00000535302 GPR84Q9NQS5 396 aa11.43□□□□□ -0.58
SPG11-203ENST00000535302 ZDHHC11BP0C7U3 371 aa11.43□□□□□ -0.58
SPG11-203ENST00000535302 RPP25Q9BUL9 199 aaKnown RBP11.43□□□□□ -0.58
SPG11-203ENST00000535302 AKIRIN1Q9H9L7 192 aaPredicted RBP11.43□□□□□ -0.58
SPG11-203ENST00000535302 LRP3O75074 770 aa11.43□□□□□ -0.58
SPG11-203ENST00000535302 ZNF205O95201 554 aa11.43□□□□□ -0.58
SPG11-203ENST00000535302 GYPAP02724 150 aa11.43□□□□□ -0.58
SPG11-203ENST00000535302 MT-ND4LP03901 98 aa11.43□□□□□ -0.58
SPG11-203ENST00000535302 ATP1B1P05026 303 aa11.43□□□□□ -0.58
SPG11-203ENST00000535302 SRP14P37108 136 aaKnown RBP11.43□□□□□ -0.58
SPG11-203ENST00000535302 RPUSD3Q6P087 351 aaKnown RBP11.43□□□□□ -0.58
SPG11-203ENST00000535302 TFAP2EQ6VUC0 442 aa11.43□□□□□ -0.58
SPG11-203ENST00000535302 ADGRG3Q86Y34 549 aa11.43□□□□□ -0.58
SPG11-203ENST00000535302 UPK1AO00322 258 aa11.43□□□□□ -0.58
SPG11-203ENST00000535302 GALR2O43603 387 aaPredicted RBP11.43□□□□□ -0.58
SPG11-203ENST00000535302 MT-ATP6P00846 226 aa11.43□□□□□ -0.58
SPG11-203ENST00000535302 IL2RAP01589 272 aa11.43□□□□□ -0.58
SPG11-203ENST00000535302 CD22P20273 847 aa11.43□□□□□ -0.58
SPG11-203ENST00000535302 IHHQ14623 411 aa11.43□□□□□ -0.58
SPG11-203ENST00000535302 GFRALQ6UXV0 394 aa11.43□□□□□ -0.58
SPG11-203ENST00000535302 GTF2H5Q6ZYL4 71 aa11.43□□□□□ -0.58
SPG11-203ENST00000535302 OR2I1PQ8NGU4 316 aa11.43□□□□□ -0.58
SPG11-203ENST00000535302 OR2T6Q8NHC8 308 aa11.43□□□□□ -0.58
SPG11-203ENST00000535302 FBXO4Q9UKT5 387 aa11.43□□□□□ -0.58
SPG11-203ENST00000535302 KCNE3Q9Y6H6 103 aa11.43□□□□□ -0.58
SPG11-203ENST00000535302 PPM1DO15297 605 aa11.43□□□□□ -0.58
SPG11-203ENST00000535302 NRASP01111 189 aa11.43□□□□□ -0.58
SPG11-203ENST00000535302 GLAP06280 429 aa11.43□□□□□ -0.58
SPG11-203ENST00000535302 NID1P14543 1247 aa11.43□□□□□ -0.58
SPG11-203ENST00000535302 CD300LGQ6UXG3 332 aa11.43□□□□□ -0.58
SPG11-203ENST00000535302 CLEC9AQ6UXN8 241 aa11.43□□□□□ -0.58
SPG11-203ENST00000535302 PTRH1Q86Y79 214 aaKnown RBP11.43□□□□□ -0.58
SPG11-203ENST00000535302 OR2AE1Q8NHA4 323 aa11.43□□□□□ -0.58
SPG11-203ENST00000535302 ICMTO60725 284 aa11.42□□□□□ -0.58
SPG11-203ENST00000535302 AQP8O94778 261 aa11.42□□□□□ -0.58
SPG11-203ENST00000535302 ADH4P08319 380 aa11.42□□□□□ -0.58
SPG11-203ENST00000535302 DOK3Q7L591 496 aa11.42□□□□□ -0.58
SPG11-203ENST00000535302 TSEN54Q7Z6J9 526 aaKnown RBP11.42□□□□□ -0.58
SPG11-203ENST00000535302 ARHGEF39Q8N4T4 335 aa11.42□□□□□ -0.58
SPG11-203ENST00000535302 RHNO1Q9BSD3 238 aa11.42□□□□□ -0.58
SPG11-203ENST00000535302 TMEM208Q9BTX3 173 aa11.42□□□□□ -0.58
SPG11-203ENST00000535302 RBFOX1Q9NWB1 397 aaKnown RBP11.42□□□□□ -0.58
SPG11-203ENST00000535302 CDK5RAP2Q96SN8 1893 aa11.42□□□□□ -0.58
SPG11-203ENST00000535302 BTAF1O14981 1849 aa11.42□□□□□ -0.58
SPG11-203ENST00000535302 EIF4E2O60573 245 aaKnown RBP11.42□□□□□ -0.58
SPG11-203ENST00000535302 RBP2P50120 134 aa11.42□□□□□ -0.58
SPG11-203ENST00000535302 ZNF133P52736 654 aaPredicted RBP11.42□□□□□ -0.58
SPG11-203ENST00000535302 SLC35D3Q5M8T2 416 aa11.42□□□□□ -0.58
SPG11-203ENST00000535302 SYT6Q5T7P8 510 aaPredicted RBP11.42□□□□□ -0.58
SPG11-203ENST00000535302 OLIG1Q8TAK6 271 aa11.42□□□□□ -0.58
SPG11-203ENST00000535302 A0A0A6YYJ9 748 aa11.42□□□□□ -0.58
SPG11-203ENST00000535302 RFPL4AA6NLU0 287 aa11.42□□□□□ -0.58
SPG11-203ENST00000535302 RFPL4AL1F8VTS6 287 aa11.42□□□□□ -0.58
SPG11-203ENST00000535302 SBK2P0C263 348 aa11.42□□□□□ -0.58
SPG11-203ENST00000535302 ZNF17P17021 662 aa11.42□□□□□ -0.58
SPG11-203ENST00000535302 CAPZBP47756 277 aa11.42□□□□□ -0.58
SPG11-203ENST00000535302 RGPD1P0DJD0 1748 aa11.42□□□□□ -0.58
SPG11-203ENST00000535302 DNASE2O00115 360 aaPredicted RBP11.42□□□□□ -0.58
SPG11-203ENST00000535302 TNFRSF10CO14798 259 aa11.42□□□□□ -0.58
SPG11-203ENST00000535302 KLK10O43240 276 aa11.42□□□□□ -0.58
SPG11-203ENST00000535302 CEACAM5P06731 702 aa11.42□□□□□ -0.58
SPG11-203ENST00000535302 TRAPPC2P0DI81 140 aa11.42□□□□□ -0.58
SPG11-203ENST00000535302 TRAPPC2BP0DI82 140 aa11.42□□□□□ -0.58
SPG11-203ENST00000535302 CCL2P13500 99 aa11.42□□□□□ -0.58
SPG11-203ENST00000535302 LYSMD2Q8IV50 215 aa11.42□□□□□ -0.58
SPG11-203ENST00000535302 A0A1W2PPQ1 181 aa11.42□□□□□ -0.58
SPG11-203ENST00000535302 BSGP35613 385 aa11.42□□□□□ -0.58
SPG11-203ENST00000535302 SPEM2Q0P670 501 aa11.42□□□□□ -0.58
SPG11-203ENST00000535302 SLC7A6Q92536 515 aa11.42□□□□□ -0.58
SPG11-203ENST00000535302 ZNF71Q9NQZ8 489 aaPredicted RBP11.42□□□□□ -0.58
SPG11-203ENST00000535302 TRDV1A0A1B0GX56 115 aa11.41□□□□□ -0.58
SPG11-203ENST00000535302 ZNF195O14628 629 aa11.41□□□□□ -0.58
SPG11-203ENST00000535302 MMP7P09237 267 aaPredicted RBP11.41□□□□□ -0.58
SPG11-203ENST00000535302 SDHAP31040 664 aa11.41□□□□□ -0.58
SPG11-203ENST00000535302 ZNF83P51522 516 aa11.41□□□□□ -0.58
SPG11-203ENST00000535302 FOXF1Q12946 379 aa11.41□□□□□ -0.58
SPG11-203ENST00000535302 SMAD4Q13485 552 aaKnown RBP11.41□□□□□ -0.58
SPG11-203ENST00000535302 HLA-BQ31612 363 aa11.41□□□□□ -0.58
SPG11-203ENST00000535302 TUSC5Q8IXB3 177 aa11.41□□□□□ -0.58
SPG11-203ENST00000535302 TCTE3Q8IZS6 198 aa11.41□□□□□ -0.58
SPG11-203ENST00000535302 NDRG3Q9UGV2 375 aa11.41□□□□□ -0.58
SPG11-203ENST00000535302 TIMM10BQ9Y5J6 103 aa11.41□□□□□ -0.58
SPG11-203ENST00000535302 CCDC88CQ9P219 2028 aa11.41□□□□□ -0.58
SPG11-203ENST00000535302 TARM1B6A8C7 271 aa11.41□□□□□ -0.58
SPG11-203ENST00000535302 PPIHO43447 177 aaKnown RBP11.41□□□□□ -0.58
SPG11-203ENST00000535302 PNPP00491 289 aa11.41□□□□□ -0.58
SPG11-203ENST00000535302 MEOX1P50221 254 aa11.41□□□□□ -0.58
SPG11-203ENST00000535302 ZNF787Q6DD87 383 aa11.41□□□□□ -0.58
SPG11-203ENST00000535302 TIPARPQ7Z3E1 657 aaKnown RBP11.41□□□□□ -0.58
SPG11-203ENST00000535302 CDH26Q8IXH8 852 aa11.41□□□□□ -0.58
SPG11-203ENST00000535302 OR2AK2Q8NG84 335 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms