RNA–Protein interactions for RNA: ENST00000534947.5

COPS7A-204, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-204ENST00000534947 IFI44Q8TCB0 444 aa16.58■□□□□ 0.25
COPS7A-204ENST00000534947 NUDCD2Q8WVJ2 157 aa16.58■□□□□ 0.25
COPS7A-204ENST00000534947 PCNPQ8WW12 178 aaKnown RBP16.58■□□□□ 0.25
COPS7A-204ENST00000534947 TMEM54Q969K7 222 aa16.58■□□□□ 0.25
COPS7A-204ENST00000534947 PHB2Q99623 299 aa16.58■□□□□ 0.25
COPS7A-204ENST00000534947 SELENOIQ9C0D9 397 aa16.58■□□□□ 0.25
COPS7A-204ENST00000534947 NARFLQ9H6Q4 476 aa16.58■□□□□ 0.25
COPS7A-204ENST00000534947 SDHAF2Q9NX18 166 aa16.58■□□□□ 0.25
COPS7A-204ENST00000534947 COMMD9Q9P000 198 aa16.58■□□□□ 0.25
COPS7A-204ENST00000534947 IFNA6P05013 189 aa16.58■□□□□ 0.24
COPS7A-204ENST00000534947 ZNF17P17021 662 aa16.58■□□□□ 0.24
COPS7A-204ENST00000534947 ZP3P21754 424 aa16.58■□□□□ 0.24
COPS7A-204ENST00000534947 MSR1P21757 451 aa16.58■□□□□ 0.24
COPS7A-204ENST00000534947 HRH1P35367 487 aa16.58■□□□□ 0.24
COPS7A-204ENST00000534947 CD96P40200 585 aa16.58■□□□□ 0.24
COPS7A-204ENST00000534947 ALDH3B1P43353 468 aa16.58■□□□□ 0.24
COPS7A-204ENST00000534947 CBX5P45973 191 aa16.58■□□□□ 0.24
COPS7A-204ENST00000534947 DSCR4P56555 118 aaPredicted RBP16.58■□□□□ 0.24
COPS7A-204ENST00000534947 NKPD1Q17RQ9 610 aa16.58■□□□□ 0.24
COPS7A-204ENST00000534947 ZNF660Q6AZW8 331 aaPredicted RBP16.58■□□□□ 0.24
COPS7A-204ENST00000534947 COMMD2Q86X83 199 aa16.58■□□□□ 0.24
COPS7A-204ENST00000534947 ZNF283Q8N7M2 679 aa16.58■□□□□ 0.24
COPS7A-204ENST00000534947 MRGPRFQ96AM1 343 aa16.58■□□□□ 0.24
COPS7A-204ENST00000534947 NELFAQ9H3P2 528 aa16.58■□□□□ 0.24
COPS7A-204ENST00000534947 ZNF224Q9NZL3 707 aa16.58■□□□□ 0.24
COPS7A-204ENST00000534947 PFDN2Q9UHV9 154 aa16.58■□□□□ 0.24
COPS7A-204ENST00000534947 KCNK7Q9Y2U2 307 aa16.58■□□□□ 0.24
COPS7A-204ENST00000534947 A0A0U1RQV5 110 aa16.57■□□□□ 0.24
COPS7A-204ENST00000534947 A0A1B0GW55 424 aa16.57■□□□□ 0.24
COPS7A-204ENST00000534947 C9orf170A2RU37 121 aa16.57■□□□□ 0.24
COPS7A-204ENST00000534947 ZSCAN5BA6NJL1 495 aa16.57■□□□□ 0.24
COPS7A-204ENST00000534947 SSX5O60225 188 aa16.57■□□□□ 0.24
COPS7A-204ENST00000534947 CDC14BO60729 498 aa16.57■□□□□ 0.24
COPS7A-204ENST00000534947 RAMP1O60894 148 aa16.57■□□□□ 0.24
COPS7A-204ENST00000534947 OPN1LWP04000 364 aa16.57■□□□□ 0.24
COPS7A-204ENST00000534947 DUX4L2P0CJ85 424 aa16.57■□□□□ 0.24
COPS7A-204ENST00000534947 DUX4L3P0CJ86 424 aa16.57■□□□□ 0.24
COPS7A-204ENST00000534947 DUX4L4P0CJ87 422 aa16.57■□□□□ 0.24
COPS7A-204ENST00000534947 DUX4L5P0CJ88 424 aa16.57■□□□□ 0.24
COPS7A-204ENST00000534947 DUX4L6P0CJ89 424 aa16.57■□□□□ 0.24
COPS7A-204ENST00000534947 DUX4L7P0CJ90 424 aa16.57■□□□□ 0.24
COPS7A-204ENST00000534947 HIST1H1DP16402 221 aaKnown RBP16.57■□□□□ 0.24
COPS7A-204ENST00000534947 ABOP16442 354 aa16.57■□□□□ 0.24
COPS7A-204ENST00000534947 GNB3P16520 340 aa16.57■□□□□ 0.24
COPS7A-204ENST00000534947 CSNK1A1P48729 337 aa16.57■□□□□ 0.24
COPS7A-204ENST00000534947 CLDN17P56750 224 aa16.57■□□□□ 0.24
COPS7A-204ENST00000534947 ECH1Q13011 328 aa16.57■□□□□ 0.24
COPS7A-204ENST00000534947 VAX1Q5SQQ9 334 aa16.57■□□□□ 0.24
COPS7A-204ENST00000534947 ALKAL2Q6UX46 152 aa16.57■□□□□ 0.24
COPS7A-204ENST00000534947 Q6ZSR3 168 aa16.57■□□□□ 0.24
COPS7A-204ENST00000534947 ARRDC1Q8N5I2 433 aa16.57■□□□□ 0.24
COPS7A-204ENST00000534947 KCNRGQ8N5I3 272 aa16.57■□□□□ 0.24
COPS7A-204ENST00000534947 GVQW1Q8N7I0 195 aa16.57■□□□□ 0.24
COPS7A-204ENST00000534947 GJC3Q8NFK1 279 aa16.57■□□□□ 0.24
COPS7A-204ENST00000534947 OR56B1Q8NGI3 324 aa16.57■□□□□ 0.24
COPS7A-204ENST00000534947 OR14K1Q8NGZ2 314 aa16.57■□□□□ 0.24
COPS7A-204ENST00000534947 INTS12Q96CB8 462 aaKnown RBP16.57■□□□□ 0.24
COPS7A-204ENST00000534947 NAA11Q9BSU3 229 aaPredicted RBP16.57■□□□□ 0.24
COPS7A-204ENST00000534947 URM1Q9BTM9 101 aaKnown RBP16.57■□□□□ 0.24
COPS7A-204ENST00000534947 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.57■□□□□ 0.24
COPS7A-204ENST00000534947 DUX4Q9UBX2 424 aa16.57■□□□□ 0.24
COPS7A-204ENST00000534947 TMA7Q9Y2S6 64 aaKnown RBP16.57■□□□□ 0.24
COPS7A-204ENST00000534947 PRUNE2Q8WUY3 3088 aa16.57■□□□□ 0.24
COPS7A-204ENST00000534947 CEACAM18A8MTB9 384 aa16.57■□□□□ 0.24
COPS7A-204ENST00000534947 C9J4A7 227 aa16.57■□□□□ 0.24
COPS7A-204ENST00000534947 D6RAR5 112 aa16.57■□□□□ 0.24
COPS7A-204ENST00000534947 DUS4LO95620 317 aaKnown RBP16.57■□□□□ 0.24
COPS7A-204ENST00000534947 APOC1P02654 83 aa16.57■□□□□ 0.24
COPS7A-204ENST00000534947 COX6A1P12074 109 aa16.57■□□□□ 0.24
COPS7A-204ENST00000534947 PRF1P14222 555 aa16.57■□□□□ 0.24
COPS7A-204ENST00000534947 LIFP15018 202 aa16.57■□□□□ 0.24
COPS7A-204ENST00000534947 HIST1H3AP68431 136 aa16.57■□□□□ 0.24
COPS7A-204ENST00000534947 HIST2H3PS2Q5TEC6 136 aa16.57■□□□□ 0.24
COPS7A-204ENST00000534947 PRAMEF20Q5VT98 475 aa16.57■□□□□ 0.24
COPS7A-204ENST00000534947 C11orf87Q6NUJ2 197 aa16.57■□□□□ 0.24
COPS7A-204ENST00000534947 HIST2H3AQ71DI3 136 aa16.57■□□□□ 0.24
COPS7A-204ENST00000534947 HOGA1Q86XE5 327 aa16.57■□□□□ 0.24
COPS7A-204ENST00000534947 AGBL5Q8NDL9 886 aa16.57■□□□□ 0.24
COPS7A-204ENST00000534947 PAQR8Q8TEZ7 354 aa16.57■□□□□ 0.24
COPS7A-204ENST00000534947 RAB3CQ96E17 227 aa16.57■□□□□ 0.24
COPS7A-204ENST00000534947 TMEM59Q9BXS4 323 aa16.57■□□□□ 0.24
COPS7A-204ENST00000534947 CST11Q9H112 138 aa16.57■□□□□ 0.24
COPS7A-204ENST00000534947 SLC25A32Q9H2D1 315 aa16.57■□□□□ 0.24
COPS7A-204ENST00000534947 AKIRIN1Q9H9L7 192 aaPredicted RBP16.57■□□□□ 0.24
COPS7A-204ENST00000534947 SH2D2AQ9NP31 389 aa16.57■□□□□ 0.24
COPS7A-204ENST00000534947 ZNF319Q9P2F9 582 aa16.57■□□□□ 0.24
COPS7A-204ENST00000534947 FBXO4Q9UKT5 387 aa16.57■□□□□ 0.24
COPS7A-204ENST00000534947 TNFSF18Q9UNG2 199 aa16.57■□□□□ 0.24
COPS7A-204ENST00000534947 NTN3O00634 580 aaPredicted RBP16.56■□□□□ 0.24
COPS7A-204ENST00000534947 UMODP07911 640 aa16.56■□□□□ 0.24
COPS7A-204ENST00000534947 POU3F2P20265 443 aaPredicted RBP16.56■□□□□ 0.24
COPS7A-204ENST00000534947 DUSP3P51452 185 aaPredicted RBP16.56■□□□□ 0.24
COPS7A-204ENST00000534947 CSNK2A1P68400 391 aaPredicted RBP16.56■□□□□ 0.24
COPS7A-204ENST00000534947 IL13RA1P78552 427 aa16.56■□□□□ 0.24
COPS7A-204ENST00000534947 PPP1R1AQ13522 171 aa16.56■□□□□ 0.24
COPS7A-204ENST00000534947 OR52W1Q6IF63 320 aa16.56■□□□□ 0.24
COPS7A-204ENST00000534947 ARMC10Q8N2F6 343 aa16.56■□□□□ 0.24
COPS7A-204ENST00000534947 EIF4E3Q8N5X7 224 aaKnown RBP16.56■□□□□ 0.24
COPS7A-204ENST00000534947 C10orf35Q96D05 121 aa16.56■□□□□ 0.24
COPS7A-204ENST00000534947 OCSTAMPQ9BR26 566 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms