RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 CADM1Q9BY67 442 aaKnown RBP11.76□□□□□ -0.53
SF3B2-215ENST00000534307 TOR3AQ9H497 397 aa11.76□□□□□ -0.53
SF3B2-215ENST00000534307 OPA3Q9H6K4 179 aa11.76□□□□□ -0.53
SF3B2-215ENST00000534307 NTN4Q9HB63 628 aa11.76□□□□□ -0.53
SF3B2-215ENST00000534307 DNAJB9Q9UBS3 223 aa11.76□□□□□ -0.53
SF3B2-215ENST00000534307 LRCH1Q9Y2L9 728 aa11.76□□□□□ -0.53
SF3B2-215ENST00000534307 INSIG2Q9Y5U4 225 aa11.76□□□□□ -0.53
SF3B2-215ENST00000534307 LRRC30A6NM36 301 aa11.75□□□□□ -0.53
SF3B2-215ENST00000534307 GNGT2O14610 69 aa11.75□□□□□ -0.53
SF3B2-215ENST00000534307 GSC2O15499 205 aa11.75□□□□□ -0.53
SF3B2-215ENST00000534307 GMDSO60547 372 aa11.75□□□□□ -0.53
SF3B2-215ENST00000534307 FAM20BO75063 409 aa11.75□□□□□ -0.53
SF3B2-215ENST00000534307 E2F6O75461 281 aa11.75□□□□□ -0.53
SF3B2-215ENST00000534307 POU1F1P28069 291 aa11.75□□□□□ -0.53
SF3B2-215ENST00000534307 SLC15A1P46059 708 aa11.75□□□□□ -0.53
SF3B2-215ENST00000534307 CX3CR1P49238 355 aa11.75□□□□□ -0.53
SF3B2-215ENST00000534307 EIF2B1Q14232 305 aaKnown RBP11.75□□□□□ -0.53
SF3B2-215ENST00000534307 OR8G1Q15617 311 aa11.75□□□□□ -0.53
SF3B2-215ENST00000534307 ESCO2Q56NI9 601 aa11.75□□□□□ -0.53
SF3B2-215ENST00000534307 PLBD1Q6P4A8 553 aa11.75□□□□□ -0.53
SF3B2-215ENST00000534307 SPATC1Q76KD6 591 aa11.75□□□□□ -0.53
SF3B2-215ENST00000534307 KLBQ86Z14 1044 aa11.75□□□□□ -0.53
SF3B2-215ENST00000534307 ERI1Q8IV48 349 aaKnown RBP11.75□□□□□ -0.53
SF3B2-215ENST00000534307 C1orf87Q8N0U7 546 aa11.75□□□□□ -0.53
SF3B2-215ENST00000534307 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.75□□□□□ -0.53
SF3B2-215ENST00000534307 PLPP7Q8NBV4 271 aa11.75□□□□□ -0.53
SF3B2-215ENST00000534307 OR56B2PQ8NGI1 322 aa11.75□□□□□ -0.53
SF3B2-215ENST00000534307 ADAT1Q9BUB4 502 aaKnown RBP11.75□□□□□ -0.53
SF3B2-215ENST00000534307 YY1AP1Q9H869 796 aa11.75□□□□□ -0.53
SF3B2-215ENST00000534307 SLC25A19Q9HC21 320 aa11.75□□□□□ -0.53
SF3B2-215ENST00000534307 NOP16Q9Y3C1 178 aaKnown RBP11.75□□□□□ -0.53
SF3B2-215ENST00000534307 CMYA5Q8N3K9 4069 aa11.75□□□□□ -0.53
SF3B2-215ENST00000534307 GGT3PA6NGU5 568 aa11.74□□□□□ -0.53
SF3B2-215ENST00000534307 PRODHO43272 600 aa11.74□□□□□ -0.53
SF3B2-215ENST00000534307 XRCC2O43543 280 aa11.74□□□□□ -0.53
SF3B2-215ENST00000534307 RGS9O75916 674 aaPredicted RBP11.74□□□□□ -0.53
SF3B2-215ENST00000534307 ANXA8P13928 327 aa11.74□□□□□ -0.53
SF3B2-215ENST00000534307 RPS2P15880 293 aaKnown RBP11.74□□□□□ -0.53
SF3B2-215ENST00000534307 PAICSP22234 425 aaKnown RBP11.74□□□□□ -0.53
SF3B2-215ENST00000534307 SLC2A5P22732 501 aa11.74□□□□□ -0.53
SF3B2-215ENST00000534307 CFPP27918 469 aa11.74□□□□□ -0.53
SF3B2-215ENST00000534307 FAM3AP98173 230 aa11.74□□□□□ -0.53
SF3B2-215ENST00000534307 HOXA4Q00056 320 aaPredicted RBP11.74□□□□□ -0.53
SF3B2-215ENST00000534307 PAX8Q06710 450 aa11.74□□□□□ -0.53
SF3B2-215ENST00000534307 TAF13Q15543 124 aa11.74□□□□□ -0.53
SF3B2-215ENST00000534307 KLF17Q5JT82 389 aaPredicted RBP11.74□□□□□ -0.53
SF3B2-215ENST00000534307 FAHD1Q6P587 224 aa11.74□□□□□ -0.53
SF3B2-215ENST00000534307 SHFQ7M4L6 423 aa11.74□□□□□ -0.53
SF3B2-215ENST00000534307 SLC16A9Q7RTY1 509 aa11.74□□□□□ -0.53
SF3B2-215ENST00000534307 OTOSQ8NHW6 89 aa11.74□□□□□ -0.53
SF3B2-215ENST00000534307 ZNF418Q8TF45 676 aaPredicted RBP11.74□□□□□ -0.53
SF3B2-215ENST00000534307 UTP4Q969X6 686 aaKnown RBP11.74□□□□□ -0.53
SF3B2-215ENST00000534307 OTULINQ96BN8 352 aa11.74□□□□□ -0.53
SF3B2-215ENST00000534307 SGK3Q96BR1 496 aa11.74□□□□□ -0.53
SF3B2-215ENST00000534307 ZMYND19Q96E35 227 aaPredicted RBP11.74□□□□□ -0.53
SF3B2-215ENST00000534307 NRBF2Q96F24 287 aa11.74□□□□□ -0.53
SF3B2-215ENST00000534307 SLC6A7Q99884 636 aa11.74□□□□□ -0.53
SF3B2-215ENST00000534307 SSBP3Q9BWW4 388 aaPredicted RBP11.74□□□□□ -0.53
SF3B2-215ENST00000534307 OR51V1Q9H2C8 321 aa11.74□□□□□ -0.53
SF3B2-215ENST00000534307 ZNF556Q9HAH1 456 aa11.74□□□□□ -0.53
SF3B2-215ENST00000534307 UFSP2Q9NUQ7 469 aa11.74□□□□□ -0.53
SF3B2-215ENST00000534307 ZNF319Q9P2F9 582 aa11.74□□□□□ -0.53
SF3B2-215ENST00000534307 MIOXQ9UGB7 285 aa11.74□□□□□ -0.53
SF3B2-215ENST00000534307 PPIAL4AQ9Y536 164 aa11.74□□□□□ -0.53
SF3B2-215ENST00000534307 DOCK11Q5JSL3 2073 aa11.74□□□□□ -0.53
SF3B2-215ENST00000534307 hCG_38984A0A1B0GV85 526 aa11.73□□□□□ -0.53
SF3B2-215ENST00000534307 PRR23D1E9PI22 279 aaPredicted RBP11.73□□□□□ -0.53
SF3B2-215ENST00000534307 SELENOFO60613 162 aa11.73□□□□□ -0.53
SF3B2-215ENST00000534307 HMGN1P05114 100 aa11.73□□□□□ -0.53
SF3B2-215ENST00000534307 PRR23D2P0DMB1 279 aaPredicted RBP11.73□□□□□ -0.53
SF3B2-215ENST00000534307 HSD11B1P28845 292 aa11.73□□□□□ -0.53
SF3B2-215ENST00000534307 CD80P33681 288 aa11.73□□□□□ -0.53
SF3B2-215ENST00000534307 DDOSTP39656 456 aa11.73□□□□□ -0.53
SF3B2-215ENST00000534307 PSMB10P40306 273 aa11.73□□□□□ -0.53
SF3B2-215ENST00000534307 ZNF121P58317 390 aaPredicted RBP11.73□□□□□ -0.53
SF3B2-215ENST00000534307 KLHL12Q53G59 568 aa11.73□□□□□ -0.53
SF3B2-215ENST00000534307 TMEM236Q5W0B7 351 aa11.73□□□□□ -0.53
SF3B2-215ENST00000534307 ZNF841Q6ZN19 808 aa11.73□□□□□ -0.53
SF3B2-215ENST00000534307 CPOQ8IVL8 374 aa11.73□□□□□ -0.53
SF3B2-215ENST00000534307 ZNF454Q8N9F8 522 aa11.73□□□□□ -0.53
SF3B2-215ENST00000534307 BBS1Q8NFJ9 593 aa11.73□□□□□ -0.53
SF3B2-215ENST00000534307 OR52H1Q8NGJ2 320 aa11.73□□□□□ -0.53
SF3B2-215ENST00000534307 OR11L1Q8NGX0 322 aa11.73□□□□□ -0.53
SF3B2-215ENST00000534307 DNAJC9Q8WXX5 260 aa11.73□□□□□ -0.53
SF3B2-215ENST00000534307 NEIL1Q96FI4 390 aaPredicted RBP11.73□□□□□ -0.53
SF3B2-215ENST00000534307 FN3KRPQ9HA64 309 aa11.73□□□□□ -0.53
SF3B2-215ENST00000534307 ESM1Q9NQ30 184 aa11.73□□□□□ -0.53
SF3B2-215ENST00000534307 OR5V1Q9UGF6 321 aa11.73□□□□□ -0.53
SF3B2-215ENST00000534307 KLHDC2Q9Y2U9 406 aa11.73□□□□□ -0.53
SF3B2-215ENST00000534307 AUP1Q9Y679 476 aa11.73□□□□□ -0.53
SF3B2-215ENST00000534307 IGHV2-70DA0A0C4DH43 119 aa11.72□□□□□ -0.53
SF3B2-215ENST00000534307 TNFRSF13BO14836 293 aaPredicted RBP11.72□□□□□ -0.53
SF3B2-215ENST00000534307 TIPRLO75663 272 aa11.72□□□□□ -0.53
SF3B2-215ENST00000534307 APOC1P02654 83 aa11.72□□□□□ -0.53
SF3B2-215ENST00000534307 ANXA2P07355 339 aaKnown RBP11.72□□□□□ -0.53
SF3B2-215ENST00000534307 LYNP07948 512 aa11.72□□□□□ -0.53
SF3B2-215ENST00000534307 PPIAL4GP0DN37 164 aa11.72□□□□□ -0.53
SF3B2-215ENST00000534307 IRF2P14316 349 aa11.72□□□□□ -0.53
SF3B2-215ENST00000534307 DAPP51397 102 aa11.72□□□□□ -0.53
SF3B2-215ENST00000534307 GNB2P62879 340 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms