RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 CCT8L2Q96SF2 557 aa7.43□□□□□ -1.22
COPB1-211ENST00000534234 NUDT16L1Q9BRJ7 211 aaKnown RBP7.43□□□□□ -1.22
COPB1-211ENST00000534234 DGCR6LQ9BY27 220 aa7.43□□□□□ -1.22
COPB1-211ENST00000534234 NMNAT2Q9BZQ4 307 aa7.43□□□□□ -1.22
COPB1-211ENST00000534234 MUC13Q9H3R2 512 aa7.43□□□□□ -1.22
COPB1-211ENST00000534234 FN3KRPQ9HA64 309 aa7.43□□□□□ -1.22
COPB1-211ENST00000534234 VNN3Q9NY84 501 aa7.43□□□□□ -1.22
COPB1-211ENST00000534234 MRPL15Q9P015 296 aaKnown RBP7.43□□□□□ -1.22
COPB1-211ENST00000534234 SOX21Q9Y651 276 aaPredicted RBP7.43□□□□□ -1.22
COPB1-211ENST00000534234 DNAJC9-AS1A6NH13 148 aa7.42□□□□□ -1.22
COPB1-211ENST00000534234 RIIAD1A6NNX1 92 aa7.42□□□□□ -1.22
COPB1-211ENST00000534234 ZNF878C9JN71 531 aa7.42□□□□□ -1.22
COPB1-211ENST00000534234 LGALS8O00214 317 aa7.42□□□□□ -1.22
COPB1-211ENST00000534234 PHYHO14832 338 aa7.42□□□□□ -1.22
COPB1-211ENST00000534234 PTBP3O95758 552 aaKnown RBP7.42□□□□□ -1.22
COPB1-211ENST00000534234 GRPP07492 148 aa7.42□□□□□ -1.22
COPB1-211ENST00000534234 CLUP10909 449 aa7.42□□□□□ -1.22
COPB1-211ENST00000534234 EGR1P18146 543 aa7.42□□□□□ -1.22
COPB1-211ENST00000534234 DDOSTP39656 456 aa7.42□□□□□ -1.22
COPB1-211ENST00000534234 MTNR1AP48039 350 aa7.42□□□□□ -1.22
COPB1-211ENST00000534234 HOXA4Q00056 320 aaPredicted RBP7.42□□□□□ -1.22
COPB1-211ENST00000534234 KCNJ8Q15842 424 aa7.42□□□□□ -1.22
COPB1-211ENST00000534234 DMRTA1Q5VZB9 504 aa7.42□□□□□ -1.22
COPB1-211ENST00000534234 SGMS2Q8NHU3 365 aa7.42□□□□□ -1.22
COPB1-211ENST00000534234 SLC25A28Q96A46 364 aa7.42□□□□□ -1.22
COPB1-211ENST00000534234 C1orf147Q96MC9 270 aaPredicted RBP7.42□□□□□ -1.22
COPB1-211ENST00000534234 ADAT1Q9BUB4 502 aaKnown RBP7.42□□□□□ -1.22
COPB1-211ENST00000534234 MMADHCQ9H3L0 296 aaPredicted RBP7.42□□□□□ -1.22
COPB1-211ENST00000534234 ZMAT3Q9HA38 289 aaKnown RBP7.42□□□□□ -1.22
COPB1-211ENST00000534234 ARMC1Q9NVT9 282 aa7.42□□□□□ -1.22
COPB1-211ENST00000534234 ERVK-18Q9QC07 812 aa7.42□□□□□ -1.22
COPB1-211ENST00000534234 PCDHGB1Q9Y5G3 927 aa7.42□□□□□ -1.22
COPB1-211ENST00000534234 TENM1Q9UKZ4 2725 aa7.42□□□□□ -1.22
COPB1-211ENST00000534234 TRAV40A0A0B4J280 105 aa7.42□□□□□ -1.22
COPB1-211ENST00000534234 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.42□□□□□ -1.22
COPB1-211ENST00000534234 DHRS12A0PJE2 317 aa7.42□□□□□ -1.22
COPB1-211ENST00000534234 FAM183AA6NL82 134 aa7.42□□□□□ -1.22
COPB1-211ENST00000534234 C3orf80F5H4A9 247 aa7.42□□□□□ -1.22
COPB1-211ENST00000534234 TBX1O43435 398 aa7.42□□□□□ -1.22
COPB1-211ENST00000534234 XRCC2O43543 280 aa7.42□□□□□ -1.22
COPB1-211ENST00000534234 SPRY1O43609 319 aaPredicted RBP7.42□□□□□ -1.22
COPB1-211ENST00000534234 NDUFA2O43678 99 aa7.42□□□□□ -1.22
COPB1-211ENST00000534234 PLATP00750 562 aa7.42□□□□□ -1.22
COPB1-211ENST00000534234 T-ENOLP0DO92 83 aa7.42□□□□□ -1.22
COPB1-211ENST00000534234 RAP2AP10114 183 aa7.42□□□□□ -1.22
COPB1-211ENST00000534234 ZNF3P17036 446 aa7.42□□□□□ -1.22
COPB1-211ENST00000534234 CALB2P22676 271 aa7.42□□□□□ -1.22
COPB1-211ENST00000534234 NPY4RP50391 375 aa7.42□□□□□ -1.22
COPB1-211ENST00000534234 FGF12P61328 243 aa7.42□□□□□ -1.22
COPB1-211ENST00000534234 GRB2P62993 217 aaKnown RBP7.42□□□□□ -1.22
COPB1-211ENST00000534234 EIF2B1Q14232 305 aaKnown RBP7.42□□□□□ -1.22
COPB1-211ENST00000534234 SLC9A3R2Q15599 337 aa7.42□□□□□ -1.22
COPB1-211ENST00000534234 OR8B8Q15620 311 aa7.42□□□□□ -1.22
COPB1-211ENST00000534234 LINC01590Q5TEZ4 76 aa7.42□□□□□ -1.22
COPB1-211ENST00000534234 CD276Q5ZPR3 534 aa7.42□□□□□ -1.22
COPB1-211ENST00000534234 CD300LDQ6UXZ3 194 aa7.42□□□□□ -1.22
COPB1-211ENST00000534234 ZNF826PQ6ZT77 177 aa7.42□□□□□ -1.22
COPB1-211ENST00000534234 C9orf139Q6ZV77 190 aa7.42□□□□□ -1.22
COPB1-211ENST00000534234 DPY19L4Q7Z388 723 aa7.42□□□□□ -1.22
COPB1-211ENST00000534234 OR10G2Q8NGC3 310 aa7.42□□□□□ -1.22
COPB1-211ENST00000534234 OR56B2PQ8NGI1 322 aa7.42□□□□□ -1.22
COPB1-211ENST00000534234 GIPC3Q8TF64 312 aa7.42□□□□□ -1.22
COPB1-211ENST00000534234 SPSB4Q96A44 273 aa7.42□□□□□ -1.22
COPB1-211ENST00000534234 OTULINQ96BN8 352 aa7.42□□□□□ -1.22
COPB1-211ENST00000534234 SGK3Q96BR1 496 aa7.42□□□□□ -1.22
COPB1-211ENST00000534234 LRGUKQ96M69 825 aa7.42□□□□□ -1.22
COPB1-211ENST00000534234 TECTBQ96PL2 329 aa7.42□□□□□ -1.22
COPB1-211ENST00000534234 FEVQ99581 238 aa7.42□□□□□ -1.22
COPB1-211ENST00000534234 NIPSNAP1Q9BPW8 284 aa7.42□□□□□ -1.22
COPB1-211ENST00000534234 CHID1Q9BWS9 393 aa7.42□□□□□ -1.22
COPB1-211ENST00000534234 OPA3Q9H6K4 179 aa7.42□□□□□ -1.22
COPB1-211ENST00000534234 MED20Q9H944 212 aa7.42□□□□□ -1.22
COPB1-211ENST00000534234 CMC2Q9NRP2 79 aa7.42□□□□□ -1.22
COPB1-211ENST00000534234 C14orf119Q9NWQ9 140 aa7.42□□□□□ -1.22
COPB1-211ENST00000534234 C1orf123Q9NWV4 160 aa7.42□□□□□ -1.22
COPB1-211ENST00000534234 DYSFO75923 2080 aa7.41□□□□□ -1.22
COPB1-211ENST00000534234 TRAV38-1A0A0B4J264 116 aa7.41□□□□□ -1.22
COPB1-211ENST00000534234 OOEPA6NGQ2 149 aa7.41□□□□□ -1.22
COPB1-211ENST00000534234 A6NLC8 198 aa7.41□□□□□ -1.22
COPB1-211ENST00000534234 ANKRD30BLA7E2S9 258 aa7.41□□□□□ -1.22
COPB1-211ENST00000534234 C22orf46C9J442 243 aa7.41□□□□□ -1.22
COPB1-211ENST00000534234 H3BN98 237 aa7.41□□□□□ -1.22
COPB1-211ENST00000534234 CLDN34H7C241 214 aa7.41□□□□□ -1.22
COPB1-211ENST00000534234 TNFRSF13BO14836 293 aaPredicted RBP7.41□□□□□ -1.22
COPB1-211ENST00000534234 ADAM20O43506 726 aa7.41□□□□□ -1.22
COPB1-211ENST00000534234 ENSAO43768 121 aaKnown RBP7.41□□□□□ -1.22
COPB1-211ENST00000534234 CST1P01037 141 aa7.41□□□□□ -1.22
COPB1-211ENST00000534234 APOC1P02654 83 aa7.41□□□□□ -1.22
COPB1-211ENST00000534234 LIPFP07098 398 aa7.41□□□□□ -1.22
COPB1-211ENST00000534234 ANXA2P07355 339 aaKnown RBP7.41□□□□□ -1.22
COPB1-211ENST00000534234 RNASE1P07998 156 aaKnown RBP7.41□□□□□ -1.22
COPB1-211ENST00000534234 HSD11B1P28845 292 aa7.41□□□□□ -1.22
COPB1-211ENST00000534234 GSTT1P30711 240 aa7.41□□□□□ -1.22
COPB1-211ENST00000534234 CX3CR1P49238 355 aa7.41□□□□□ -1.22
COPB1-211ENST00000534234 FAM3AP98173 230 aa7.41□□□□□ -1.22
COPB1-211ENST00000534234 MZT1Q08AG7 82 aa7.41□□□□□ -1.22
COPB1-211ENST00000534234 TIGD6Q17RP2 521 aa7.41□□□□□ -1.22
COPB1-211ENST00000534234 BRD3OSQ6XYD6 125 aa7.41□□□□□ -1.22
COPB1-211ENST00000534234 SLC16A9Q7RTY1 509 aa7.41□□□□□ -1.22
COPB1-211ENST00000534234 ERI1Q8IV48 349 aaKnown RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms