RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 MEGF10Q96KG7 1140 aa11.32□□□□□ -0.6
CMTM1-219ENST00000533953 CLN6Q9NWW5 311 aa11.32□□□□□ -0.6
CMTM1-219ENST00000533953 HAO2Q9NYQ3 351 aa11.32□□□□□ -0.6
CMTM1-219ENST00000533953 CGGBP1Q9UFW8 167 aaPredicted RBP11.32□□□□□ -0.6
CMTM1-219ENST00000533953 MRM2Q9UI43 246 aaKnown RBP11.32□□□□□ -0.6
CMTM1-219ENST00000533953 SETD2Q9BYW2 2564 aaPredicted RBP11.32□□□□□ -0.6
CMTM1-219ENST00000533953 CR1P17927 2039 aa11.31□□□□□ -0.6
CMTM1-219ENST00000533953 TMEM269A0A1B0GVZ9 245 aa11.31□□□□□ -0.6
CMTM1-219ENST00000533953 XRCC2O43543 280 aa11.31□□□□□ -0.6
CMTM1-219ENST00000533953 RPP14O95059 124 aaKnown RBP11.31□□□□□ -0.6
CMTM1-219ENST00000533953 TACSTD2P09758 323 aa11.31□□□□□ -0.6
CMTM1-219ENST00000533953 ZNF16P17020 682 aaPredicted RBP11.31□□□□□ -0.6
CMTM1-219ENST00000533953 TNFSF4P23510 183 aa11.31□□□□□ -0.6
CMTM1-219ENST00000533953 GSK3AP49840 483 aa11.31□□□□□ -0.6
CMTM1-219ENST00000533953 PSMA6P60900 246 aaKnown RBP11.31□□□□□ -0.6
CMTM1-219ENST00000533953 MRPS11P82912 194 aaKnown RBP11.31□□□□□ -0.6
CMTM1-219ENST00000533953 ROM1Q03395 351 aa11.31□□□□□ -0.6
CMTM1-219ENST00000533953 MAB21L1Q13394 359 aa11.31□□□□□ -0.6
CMTM1-219ENST00000533953 MPPED2Q15777 294 aa11.31□□□□□ -0.6
CMTM1-219ENST00000533953 ZMAT1Q5H9K5 638 aa11.31□□□□□ -0.6
CMTM1-219ENST00000533953 DMRTC1Q5HYR2 192 aa11.31□□□□□ -0.6
CMTM1-219ENST00000533953 FAM201AQ5SY85 155 aa11.31□□□□□ -0.6
CMTM1-219ENST00000533953 KCTD18Q6PI47 426 aaPredicted RBP11.31□□□□□ -0.6
CMTM1-219ENST00000533953 RHOUQ7L0Q8 258 aa11.31□□□□□ -0.6
CMTM1-219ENST00000533953 MOGAT3Q86VF5 341 aa11.31□□□□□ -0.6
CMTM1-219ENST00000533953 ZNF679Q8IYX0 411 aa11.31□□□□□ -0.6
CMTM1-219ENST00000533953 ZNF540Q8NDQ6 660 aa11.31□□□□□ -0.6
CMTM1-219ENST00000533953 RHOXF1Q8NHV9 184 aa11.31□□□□□ -0.6
CMTM1-219ENST00000533953 TRUB1Q8WWH5 349 aaKnown RBP11.31□□□□□ -0.6
CMTM1-219ENST00000533953 SPSB4Q96A44 273 aa11.31□□□□□ -0.6
CMTM1-219ENST00000533953 MSI2Q96DH6 328 aaKnown RBP11.31□□□□□ -0.6
CMTM1-219ENST00000533953 RNFT2Q96EX2 444 aa11.31□□□□□ -0.6
CMTM1-219ENST00000533953 DIRC2Q96SL1 478 aa11.31□□□□□ -0.6
CMTM1-219ENST00000533953 MROQ9BYG7 248 aa11.31□□□□□ -0.6
CMTM1-219ENST00000533953 OR10A2Q9H208 303 aa11.31□□□□□ -0.6
CMTM1-219ENST00000533953 UFSP2Q9NUQ7 469 aa11.31□□□□□ -0.6
CMTM1-219ENST00000533953 FAM206AQ9NX38 181 aa11.31□□□□□ -0.6
CMTM1-219ENST00000533953 SMPD3Q9NY59 655 aaPredicted RBP11.31□□□□□ -0.6
CMTM1-219ENST00000533953 IL19Q9UHD0 177 aa11.31□□□□□ -0.6
CMTM1-219ENST00000533953 GTF2A1LQ9UNN4 478 aa11.31□□□□□ -0.6
CMTM1-219ENST00000533953 WIPI2Q9Y4P8 454 aa11.31□□□□□ -0.6
CMTM1-219ENST00000533953 TMEM14AQ9Y6G1 99 aa11.31□□□□□ -0.6
CMTM1-219ENST00000533953 ABCA1O95477 2261 aa11.3□□□□□ -0.6
CMTM1-219ENST00000533953 hCG_38984A0A1B0GV85 526 aa11.3□□□□□ -0.6
CMTM1-219ENST00000533953 C3orf80F5H4A9 247 aa11.3□□□□□ -0.6
CMTM1-219ENST00000533953 H3BSH0 61 aa11.3□□□□□ -0.6
CMTM1-219ENST00000533953 CD5LO43866 347 aa11.3□□□□□ -0.6
CMTM1-219ENST00000533953 CYB5R3P00387 301 aaPredicted RBP11.3□□□□□ -0.6
CMTM1-219ENST00000533953 APOC1P02654 83 aa11.3□□□□□ -0.6
CMTM1-219ENST00000533953 ACKR3P25106 362 aa11.3□□□□□ -0.6
CMTM1-219ENST00000533953 ZNF85Q03923 595 aa11.3□□□□□ -0.6
CMTM1-219ENST00000533953 OR8G1Q15617 311 aa11.3□□□□□ -0.6
CMTM1-219ENST00000533953 OCLNQ16625 522 aa11.3□□□□□ -0.6
CMTM1-219ENST00000533953 SMN1Q16637 294 aaKnown RBP11.3□□□□□ -0.6
CMTM1-219ENST00000533953 C19orf18Q8NEA5 215 aa11.3□□□□□ -0.6
CMTM1-219ENST00000533953 OR52H1Q8NGJ2 320 aa11.3□□□□□ -0.6
CMTM1-219ENST00000533953 APH1BQ8WW43 257 aa11.3□□□□□ -0.6
CMTM1-219ENST00000533953 CYGBQ8WWM9 190 aa11.3□□□□□ -0.6
CMTM1-219ENST00000533953 ASB17Q8WXJ9 295 aa11.3□□□□□ -0.6
CMTM1-219ENST00000533953 SIGLEC11Q96RL6 698 aa11.3□□□□□ -0.6
CMTM1-219ENST00000533953 PBOV1Q9GZY1 135 aa11.3□□□□□ -0.6
CMTM1-219ENST00000533953 LPAR2Q9HBW0 351 aa11.3□□□□□ -0.6
CMTM1-219ENST00000533953 GCM1Q9NP62 436 aa11.3□□□□□ -0.6
CMTM1-219ENST00000533953 TMEM106BQ9NUM4 274 aa11.3□□□□□ -0.6
CMTM1-219ENST00000533953 PPP1R3CQ9UQK1 317 aa11.3□□□□□ -0.6
CMTM1-219ENST00000533953 SLC22A13Q9Y226 551 aa11.3□□□□□ -0.6
CMTM1-219ENST00000533953 RHBDD3Q9Y3P4 386 aa11.3□□□□□ -0.6
CMTM1-219ENST00000533953 FN1P02751 2386 aaKnown RBP11.3□□□□□ -0.6
CMTM1-219ENST00000533953 LOC100289279A0A1B0GTE1 492 aa11.29□□□□□ -0.6
CMTM1-219ENST00000533953 A0A1B0GWJ7 208 aa11.29□□□□□ -0.6
CMTM1-219ENST00000533953 ISPDA4D126 451 aa11.29□□□□□ -0.6
CMTM1-219ENST00000533953 FAM157AC9JC47 383 aa11.29□□□□□ -0.6
CMTM1-219ENST00000533953 CLDN25C9JDP6 229 aa11.29□□□□□ -0.6
CMTM1-219ENST00000533953 SLC16A6O15403 523 aa11.29□□□□□ -0.6
CMTM1-219ENST00000533953 SRSF10O75494 262 aaKnown RBP11.29□□□□□ -0.6
CMTM1-219ENST00000533953 GRPP07492 148 aa11.29□□□□□ -0.6
CMTM1-219ENST00000533953 OR2T7P0C7T2 308 aa11.29□□□□□ -0.6
CMTM1-219ENST00000533953 PSMB10P40306 273 aa11.29□□□□□ -0.6
CMTM1-219ENST00000533953 MTNR1AP48039 350 aa11.29□□□□□ -0.6
CMTM1-219ENST00000533953 CHN2P52757 468 aa11.29□□□□□ -0.6
CMTM1-219ENST00000533953 RIDAP52758 137 aaKnown RBP11.29□□□□□ -0.6
CMTM1-219ENST00000533953 LMO4P61968 165 aa11.29□□□□□ -0.6
CMTM1-219ENST00000533953 ODF4Q2M2E3 257 aa11.29□□□□□ -0.6
CMTM1-219ENST00000533953 TP53I3Q53FA7 332 aa11.29□□□□□ -0.6
CMTM1-219ENST00000533953 SLC25A30Q5SVS4 291 aa11.29□□□□□ -0.6
CMTM1-219ENST00000533953 OGFRL1Q5TC84 451 aaPredicted RBP11.29□□□□□ -0.6
CMTM1-219ENST00000533953 CYB5R2Q6BCY4 276 aa11.29□□□□□ -0.6
CMTM1-219ENST00000533953 DEGS2Q6QHC5 323 aa11.29□□□□□ -0.6
CMTM1-219ENST00000533953 YIPF7Q8N8F6 280 aa11.29□□□□□ -0.6
CMTM1-219ENST00000533953 OR2T27Q8NH04 317 aa11.29□□□□□ -0.6
CMTM1-219ENST00000533953 OR51E1Q8TCB6 317 aa11.29□□□□□ -0.6
CMTM1-219ENST00000533953 RFKQ969G6 155 aa11.29□□□□□ -0.6
CMTM1-219ENST00000533953 LGALS12Q96DT0 336 aa11.29□□□□□ -0.6
CMTM1-219ENST00000533953 FAM71F1Q96KD3 344 aaPredicted RBP11.29□□□□□ -0.6
CMTM1-219ENST00000533953 ADAT1Q9BUB4 502 aaKnown RBP11.29□□□□□ -0.6
CMTM1-219ENST00000533953 NIPAL2Q9H841 368 aa11.29□□□□□ -0.6
CMTM1-219ENST00000533953 SP140LQ9H930 580 aa11.29□□□□□ -0.6
CMTM1-219ENST00000533953 CHD3Q12873 2000 aaKnown RBP11.29□□□□□ -0.6
CMTM1-219ENST00000533953 ZNF254O75437 659 aa11.28□□□□□ -0.6
CMTM1-219ENST00000533953 TGFAP01135 160 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms